RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 ORC3Q9UBD5 711 aaPredicted RBP12.25□□□□□ -0.45
GABRB3-204ENST00000541819 CCDC152Q4G0S7 254 aa12.25□□□□□ -0.45
GABRB3-204ENST00000541819 KRT23Q9C075 422 aa12.25□□□□□ -0.45
GABRB3-204ENST00000541819 CCDC14Q49A88 953 aa12.24□□□□□ -0.45
GABRB3-204ENST00000541819 CEP135Q66GS9 1140 aa12.24□□□□□ -0.45
GABRB3-204ENST00000541819 ABCC11Q96J66 1382 aa12.24□□□□□ -0.45
GABRB3-204ENST00000541819 FAM13AO94988 1023 aa12.24□□□□□ -0.45
GABRB3-204ENST00000541819 SMARCC2Q8TAQ2 1214 aa12.24□□□□□ -0.45
GABRB3-204ENST00000541819 NAP1L3Q99457 506 aaPredicted RBP12.24□□□□□ -0.45
GABRB3-204ENST00000541819 EEF2P13639 858 aaKnown RBP12.24□□□□□ -0.45
GABRB3-204ENST00000541819 GJC1P36383 396 aa12.24□□□□□ -0.45
GABRB3-204ENST00000541819 C16orf45Q96MC5 204 aaPredicted RBP12.24□□□□□ -0.45
GABRB3-204ENST00000541819 PANK2Q9BZ23 570 aa12.24□□□□□ -0.45
GABRB3-204ENST00000541819 WTAPQ15007 396 aa12.24□□□□□ -0.45
GABRB3-204ENST00000541819 TTC14Q96N46 770 aa12.24□□□□□ -0.45
GABRB3-204ENST00000541819 HMG20BQ9P0W2 317 aa12.24□□□□□ -0.45
GABRB3-204ENST00000541819 SMARCA4P51532 1647 aa12.24□□□□□ -0.45
GABRB3-204ENST00000541819 LMBR1Q8WVP7 490 aa12.24□□□□□ -0.45
GABRB3-204ENST00000541819 NBPF6Q5VWK0 638 aa12.23□□□□□ -0.45
GABRB3-204ENST00000541819 NBPF5PQ86XG9 351 aaPredicted RBP12.23□□□□□ -0.45
GABRB3-204ENST00000541819 NBPF4Q96M43 638 aa12.23□□□□□ -0.45
GABRB3-204ENST00000541819 ZMYND15Q9H091 742 aa12.23□□□□□ -0.45
GABRB3-204ENST00000541819 GTF2F1P35269 517 aaKnown RBP eCLIP12.23□□□□□ -0.45
GABRB3-204ENST00000541819 PTPRCP08575 1304 aa12.23□□□□□ -0.45
GABRB3-204ENST00000541819 DPH6Q7L8W6 267 aa12.23□□□□□ -0.45
GABRB3-204ENST00000541819 TCHPQ9BT92 498 aa12.23□□□□□ -0.45
GABRB3-204ENST00000541819 TXNDC16Q9P2K2 825 aa12.23□□□□□ -0.45
GABRB3-204ENST00000541819 MAP3K2Q9Y2U5 619 aa12.23□□□□□ -0.45
GABRB3-204ENST00000541819 MAPK8IP2Q13387 824 aaPredicted RBP12.23□□□□□ -0.45
GABRB3-204ENST00000541819 IFIT1BQ5T764 474 aaKnown RBP12.23□□□□□ -0.45
GABRB3-204ENST00000541819 NEK1Q96PY6 1258 aa12.23□□□□□ -0.45
GABRB3-204ENST00000541819 ATP2C2O75185 946 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 CCDC50Q8IVM0 306 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 OGFOD1Q8N543 542 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 ECHDC1Q9NTX5 307 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 USP25Q9UHP3 1055 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 AQRO60306 1485 aaKnown RBP eCLIP12.22□□□□□ -0.45
GABRB3-204ENST00000541819 HEATR3Q7Z4Q2 680 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 C6orf50Q9HD87 102 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 STX8Q9UNK0 236 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 CCDC160A6NGH7 325 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 GAS8O95995 478 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 PLS1Q14651 629 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 SMC1BQ8NDV3 1235 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 MKRN1Q9UHC7 482 aaKnown RBP12.22□□□□□ -0.45
GABRB3-204ENST00000541819 ATP2A2P16615 1042 aaKnown RBP12.22□□□□□ -0.45
GABRB3-204ENST00000541819 GNAQP50148 359 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 HAND2P61296 217 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 GNG11P61952 73 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 FAM169AQ9Y6X4 670 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 TMEM110-MUSTN1A8MSY1 372 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 MCM5P33992 734 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 SLFN5Q08AF3 891 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 CEP83Q9Y592 693 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 ERICH3Q5RHP9 1530 aa12.22□□□□□ -0.45
GABRB3-204ENST00000541819 NAIPQ13075 1403 aa12.21□□□□□ -0.45
GABRB3-204ENST00000541819 GMNNO75496 209 aa12.21□□□□□ -0.45
GABRB3-204ENST00000541819 CFAP58Q5T655 872 aa12.21□□□□□ -0.45
GABRB3-204ENST00000541819 FAM212AQ96EL1 285 aa12.21□□□□□ -0.45
GABRB3-204ENST00000541819 THUMPD2Q9BTF0 503 aaKnown RBP12.21□□□□□ -0.45
GABRB3-204ENST00000541819 PHF8Q9UPP1 1060 aa12.21□□□□□ -0.45
GABRB3-204ENST00000541819 CALM1P0DP23 149 aa12.21□□□□□ -0.45
GABRB3-204ENST00000541819 CALM2P0DP24 149 aa12.21□□□□□ -0.45
GABRB3-204ENST00000541819 CALM3P0DP25 149 aa12.21□□□□□ -0.45
GABRB3-204ENST00000541819 MSL1Q68DK7 614 aa12.21□□□□□ -0.45
GABRB3-204ENST00000541819 CNNM2Q9H8M5 875 aa12.21□□□□□ -0.45
GABRB3-204ENST00000541819 IGF1RP08069 1367 aa12.21□□□□□ -0.45
GABRB3-204ENST00000541819 DYNC1I1O14576 645 aa12.21□□□□□ -0.45
GABRB3-204ENST00000541819 CAVIN2O95810 425 aa12.21□□□□□ -0.45
GABRB3-204ENST00000541819 ZBTB16Q05516 673 aa12.21□□□□□ -0.45
GABRB3-204ENST00000541819 ISM2Q6H9L7 571 aa12.21□□□□□ -0.45
GABRB3-204ENST00000541819 RUSC2Q8N2Y8 1516 aa12.21□□□□□ -0.45
GABRB3-204ENST00000541819 IFNL2Q8IZJ0 200 aa12.21□□□□□ -0.46
GABRB3-204ENST00000541819 TMTC2Q8N394 836 aa12.21□□□□□ -0.46
GABRB3-204ENST00000541819 ZSCAN16Q9H4T2 348 aaPredicted RBP12.21□□□□□ -0.46
GABRB3-204ENST00000541819 SNRKQ9NRH2 765 aa12.21□□□□□ -0.46
GABRB3-204ENST00000541819 F6X3S4 739 aa12.21□□□□□ -0.46
GABRB3-204ENST00000541819 SYKP43405 635 aa12.21□□□□□ -0.46
GABRB3-204ENST00000541819 SPAG1Q07617 926 aa12.21□□□□□ -0.46
GABRB3-204ENST00000541819 ZNF710Q8N1W2 664 aa12.21□□□□□ -0.46
GABRB3-204ENST00000541819 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.21□□□□□ -0.46
GABRB3-204ENST00000541819 GRIN2BQ13224 1484 aa12.2□□□□□ -0.46
GABRB3-204ENST00000541819 ANKS4BQ8N8V4 417 aa12.2□□□□□ -0.46
GABRB3-204ENST00000541819 CCDC129Q6ZRS4 1044 aa12.2□□□□□ -0.46
GABRB3-204ENST00000541819 ZNF804AQ7Z570 1209 aa12.2□□□□□ -0.46
GABRB3-204ENST00000541819 ESR2Q92731 530 aa12.2□□□□□ -0.46
GABRB3-204ENST00000541819 OPA1O60313 960 aa12.2□□□□□ -0.46
GABRB3-204ENST00000541819 TACC1O75410 805 aa12.2□□□□□ -0.46
GABRB3-204ENST00000541819 CFAP157Q5JU67 520 aa12.2□□□□□ -0.46
GABRB3-204ENST00000541819 IL27Q8NEV9 243 aa12.2□□□□□ -0.46
GABRB3-204ENST00000541819 TFIP11Q9UBB9 837 aaKnown RBP12.2□□□□□ -0.46
GABRB3-204ENST00000541819 CTAGE15A4D2H0 777 aa12.2□□□□□ -0.46
GABRB3-204ENST00000541819 CTAGE8P0CG41 777 aa12.2□□□□□ -0.46
GABRB3-204ENST00000541819 ALDH3A1P30838 453 aa12.2□□□□□ -0.46
GABRB3-204ENST00000541819 NAPAP54920 295 aa12.2□□□□□ -0.46
GABRB3-204ENST00000541819 PLCB3Q01970 1234 aa12.2□□□□□ -0.46
GABRB3-204ENST00000541819 CTAGE6Q86UF2 777 aa12.2□□□□□ -0.46
GABRB3-204ENST00000541819 RAB11FIP4Q86YS3 637 aa12.2□□□□□ -0.46
GABRB3-204ENST00000541819 CTAGE4Q8IX94 777 aa12.2□□□□□ -0.46
GABRB3-204ENST00000541819 RBM25P49756 843 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms