RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 NPHP3Q7Z494 1330 aa17.88■□□□□ 0.45
VARS2-211ENST00000541562 AP5Z1O43299 807 aa17.88■□□□□ 0.45
VARS2-211ENST00000541562 FAM184AQ8NB25 1140 aa17.88■□□□□ 0.45
VARS2-211ENST00000541562 CEMIPQ8WUJ3 1361 aa17.87■□□□□ 0.45
VARS2-211ENST00000541562 TAF7LQ5H9L4 462 aa17.87■□□□□ 0.45
VARS2-211ENST00000541562 FMNL2Q96PY5 1086 aa17.87■□□□□ 0.45
VARS2-211ENST00000541562 NECTIN1Q15223 517 aa17.87■□□□□ 0.45
VARS2-211ENST00000541562 CLEC17AQ6ZS10 378 aa17.86■□□□□ 0.45
VARS2-211ENST00000541562 INTS4Q96HW7 963 aaKnown RBP17.86■□□□□ 0.45
VARS2-211ENST00000541562 RGPD2P0DJD1 1756 aa17.86■□□□□ 0.45
VARS2-211ENST00000541562 TNNI3KQ59H18 835 aa17.86■□□□□ 0.45
VARS2-211ENST00000541562 SPATA32Q96LK8 384 aa17.86■□□□□ 0.45
VARS2-211ENST00000541562 FPGT-TNNI3KV9GXZ4 949 aa17.86■□□□□ 0.45
VARS2-211ENST00000541562 EVA1CP58658 441 aa17.86■□□□□ 0.45
VARS2-211ENST00000541562 PTPN12Q05209 780 aaKnown RBP17.86■□□□□ 0.45
VARS2-211ENST00000541562 PTPN21Q16825 1174 aa17.85■□□□□ 0.45
VARS2-211ENST00000541562 IFNL2Q8IZJ0 200 aa17.85■□□□□ 0.45
VARS2-211ENST00000541562 CCDC82Q8N4S0 544 aa17.85■□□□□ 0.45
VARS2-211ENST00000541562 CCDC183Q5T5S1 534 aa17.85■□□□□ 0.45
VARS2-211ENST00000541562 PRDM10Q9NQV6 1147 aa17.85■□□□□ 0.45
VARS2-211ENST00000541562 ALDH1L1O75891 902 aa17.85■□□□□ 0.45
VARS2-211ENST00000541562 POLR3DP05423 398 aaPredicted RBP17.85■□□□□ 0.45
VARS2-211ENST00000541562 ISY1Q9ULR0 285 aaKnown RBP17.85■□□□□ 0.45
VARS2-211ENST00000541562 SNRPA1P09661 255 aaKnown RBP17.84■□□□□ 0.45
VARS2-211ENST00000541562 ADORA1P30542 326 aa17.84■□□□□ 0.45
VARS2-211ENST00000541562 ERC1Q8IUD2 1116 aa17.84■□□□□ 0.45
VARS2-211ENST00000541562 METTL22Q9BUU2 404 aaPredicted RBP17.84■□□□□ 0.45
VARS2-211ENST00000541562 DENND2AQ9ULE3 1009 aa17.84■□□□□ 0.45
VARS2-211ENST00000541562 ZKSCAN5Q9Y2L8 839 aa17.84■□□□□ 0.45
VARS2-211ENST00000541562 APPP05067 770 aa17.84■□□□□ 0.45
VARS2-211ENST00000541562 CYP21A2P08686 494 aa17.84■□□□□ 0.45
VARS2-211ENST00000541562 ZBTB9Q96C00 473 aa17.84■□□□□ 0.45
VARS2-211ENST00000541562 NRBP1Q9UHY1 535 aa17.84■□□□□ 0.45
VARS2-211ENST00000541562 ZSWIM6Q9HCJ5 1215 aa17.84■□□□□ 0.45
VARS2-211ENST00000541562 TTC41PQ6P2S7 1318 aa17.84■□□□□ 0.45
VARS2-211ENST00000541562 NBPF26B4DH59 902 aa17.83■□□□□ 0.45
VARS2-211ENST00000541562 TOB2Q14106 344 aaPredicted RBP17.83■□□□□ 0.45
VARS2-211ENST00000541562 NBPF14Q5TI25 921 aa17.83■□□□□ 0.45
VARS2-211ENST00000541562 NBPF10Q6P3W6 841 aaKnown RBP17.83■□□□□ 0.45
VARS2-211ENST00000541562 NBPF15Q8N660 670 aa17.83■□□□□ 0.45
VARS2-211ENST00000541562 INCENPQ9NQS7 918 aa17.83■□□□□ 0.45
VARS2-211ENST00000541562 UBE2HP62256 183 aa17.83■□□□□ 0.44
VARS2-211ENST00000541562 ZNF592Q92610 1267 aa17.83■□□□□ 0.44
VARS2-211ENST00000541562 IQSEC3Q9UPP2 1182 aaPredicted RBP17.83■□□□□ 0.44
VARS2-211ENST00000541562 KIF13AQ9H1H9 1805 aa17.83■□□□□ 0.44
VARS2-211ENST00000541562 LRMPQ12912 555 aa17.83■□□□□ 0.44
VARS2-211ENST00000541562 MAP4K1Q92918 833 aa17.83■□□□□ 0.44
VARS2-211ENST00000541562 NEK1Q96PY6 1258 aa17.83■□□□□ 0.44
VARS2-211ENST00000541562 NWD1Q149M9 1564 aa17.82■□□□□ 0.44
VARS2-211ENST00000541562 NR1I2O75469 434 aa17.82■□□□□ 0.44
VARS2-211ENST00000541562 TAF5LO75529 589 aa17.82■□□□□ 0.44
VARS2-211ENST00000541562 DNAJC25Q9H1X3 360 aa17.82■□□□□ 0.44
VARS2-211ENST00000541562 NOL7Q9UMY1 257 aaKnown RBP17.82■□□□□ 0.44
VARS2-211ENST00000541562 RNF20Q5VTR2 975 aa17.82■□□□□ 0.44
VARS2-211ENST00000541562 CCDC39Q9UFE4 941 aa17.82■□□□□ 0.44
VARS2-211ENST00000541562 TNMDQ9H2S6 317 aa17.81■□□□□ 0.44
VARS2-211ENST00000541562 BIN1O00499 593 aa17.81■□□□□ 0.44
VARS2-211ENST00000541562 STOX1Q6ZVD7 989 aa17.81■□□□□ 0.44
VARS2-211ENST00000541562 SMIM5Q71RC9 77 aa17.81■□□□□ 0.44
VARS2-211ENST00000541562 KRT85P78386 507 aa17.81■□□□□ 0.44
VARS2-211ENST00000541562 KIAA2012Q0VF49 1180 aa17.81■□□□□ 0.44
VARS2-211ENST00000541562 ANO6Q4KMQ2 910 aa17.81■□□□□ 0.44
VARS2-211ENST00000541562 TOMM22Q9NS69 142 aa17.81■□□□□ 0.44
VARS2-211ENST00000541562 COL15A1P39059 1388 aa17.81■□□□□ 0.44
VARS2-211ENST00000541562 RPS6KB1P23443 525 aa17.8■□□□□ 0.44
VARS2-211ENST00000541562 HSP90AA4PQ58FG1 418 aa17.8■□□□□ 0.44
VARS2-211ENST00000541562 IFIT1P09914 478 aaKnown RBP17.8■□□□□ 0.44
VARS2-211ENST00000541562 NPHP1O15259 732 aa17.8■□□□□ 0.44
VARS2-211ENST00000541562 OFD1O75665 1012 aa17.8■□□□□ 0.44
VARS2-211ENST00000541562 PHF14O94880 888 aa17.8■□□□□ 0.44
VARS2-211ENST00000541562 TRIM5Q9C035 493 aa17.8■□□□□ 0.44
VARS2-211ENST00000541562 C19orf44Q9H6X5 657 aa17.8■□□□□ 0.44
VARS2-211ENST00000541562 ATP2B1P20020 1258 aa17.79■□□□□ 0.44
VARS2-211ENST00000541562 PTGS1P23219 599 aa17.79■□□□□ 0.44
VARS2-211ENST00000541562 PYCARDQ9ULZ3 195 aa17.79■□□□□ 0.44
VARS2-211ENST00000541562 PSMA5P28066 241 aa17.79■□□□□ 0.44
VARS2-211ENST00000541562 NUP62CLQ9H1M0 184 aa17.79■□□□□ 0.44
VARS2-211ENST00000541562 TBC1D2BQ9UPU7 963 aa17.79■□□□□ 0.44
VARS2-211ENST00000541562 KCNQ4P56696 695 aa17.78■□□□□ 0.44
VARS2-211ENST00000541562 SCARF1Q14162 830 aa17.78■□□□□ 0.44
VARS2-211ENST00000541562 SLC4A8Q2Y0W8 1093 aa17.78■□□□□ 0.44
VARS2-211ENST00000541562 ASAP1Q9ULH1 1129 aa17.78■□□□□ 0.44
VARS2-211ENST00000541562 ARID5BQ14865 1188 aa17.78■□□□□ 0.44
VARS2-211ENST00000541562 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.78■□□□□ 0.44
VARS2-211ENST00000541562 ATP6V1DQ9Y5K8 247 aa17.78■□□□□ 0.44
VARS2-211ENST00000541562 SCRN1Q12765 414 aa17.78■□□□□ 0.44
VARS2-211ENST00000541562 A0A1B0GUL7 405 aa17.77■□□□□ 0.44
VARS2-211ENST00000541562 MYL10Q9BUA6 226 aa17.77■□□□□ 0.44
VARS2-211ENST00000541562 FILIP1Q7Z7B0 1213 aa17.77■□□□□ 0.43
VARS2-211ENST00000541562 IDH1O75874 414 aaKnown RBP17.76■□□□□ 0.43
VARS2-211ENST00000541562 ME1P48163 572 aa17.76■□□□□ 0.43
VARS2-211ENST00000541562 PDLIM2Q96JY6 352 aa17.76■□□□□ 0.43
VARS2-211ENST00000541562 PAG1Q9NWQ8 432 aa17.76■□□□□ 0.43
VARS2-211ENST00000541562 RGPD1P0DJD0 1748 aa17.76■□□□□ 0.43
VARS2-211ENST00000541562 TMEM94Q12767 1356 aa17.76■□□□□ 0.43
VARS2-211ENST00000541562 AIFM3Q96NN9 605 aa17.76■□□□□ 0.43
VARS2-211ENST00000541562 UBE2Q2LH0YL09 131 aa17.75■□□□□ 0.43
VARS2-211ENST00000541562 DNAJC10Q8IXB1 793 aa17.75■□□□□ 0.43
VARS2-211ENST00000541562 C16orf45Q96MC5 204 aaPredicted RBP17.75■□□□□ 0.43
VARS2-211ENST00000541562 AOX1Q06278 1338 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms