RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 HYPKQ9NX55 129 aa6.39□□□□□ -1.39
SPARCL1-209ENST00000541496 TSR3Q9UJK0 312 aaKnown RBP6.39□□□□□ -1.39
SPARCL1-209ENST00000541496 RCAN3Q9UKA8 241 aa6.39□□□□□ -1.39
SPARCL1-209ENST00000541496 DOT1LQ8TEK3 1739 aa6.39□□□□□ -1.39
SPARCL1-209ENST00000541496 SCN11AQ9UI33 1791 aa6.39□□□□□ -1.39
SPARCL1-209ENST00000541496 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.38□□□□□ -1.39
SPARCL1-209ENST00000541496 RPS6KA4O75676 772 aa6.38□□□□□ -1.39
SPARCL1-209ENST00000541496 A1BGP04217 495 aa6.38□□□□□ -1.39
SPARCL1-209ENST00000541496 EIF2S2P20042 333 aaKnown RBP6.38□□□□□ -1.39
SPARCL1-209ENST00000541496 BCAMP50895 628 aa6.38□□□□□ -1.39
SPARCL1-209ENST00000541496 EIF5P55010 431 aaKnown RBP6.38□□□□□ -1.39
SPARCL1-209ENST00000541496 EZH2Q15910 746 aaKnown RBP6.38□□□□□ -1.39
SPARCL1-209ENST00000541496 NBPF14Q5TI25 921 aa6.38□□□□□ -1.39
SPARCL1-209ENST00000541496 NBPF10Q6P3W6 841 aaKnown RBP6.38□□□□□ -1.39
SPARCL1-209ENST00000541496 SAMD7Q7Z3H4 446 aa6.38□□□□□ -1.39
SPARCL1-209ENST00000541496 DEFB132Q7Z7B7 95 aa6.38□□□□□ -1.39
SPARCL1-209ENST00000541496 SLF2Q8IX21 1173 aa6.38□□□□□ -1.39
SPARCL1-209ENST00000541496 NBPF15Q8N660 670 aa6.38□□□□□ -1.39
SPARCL1-209ENST00000541496 ARHGAP45Q92619 1136 aa6.38□□□□□ -1.39
SPARCL1-209ENST00000541496 CHPF2Q9P2E5 772 aa6.38□□□□□ -1.39
SPARCL1-209ENST00000541496 ZBTB1Q9Y2K1 713 aa6.38□□□□□ -1.39
SPARCL1-209ENST00000541496 KIF16BQ96L93 1317 aa6.38□□□□□ -1.39
SPARCL1-209ENST00000541496 CICQ96RK0 1608 aaPredicted RBP6.38□□□□□ -1.39
SPARCL1-209ENST00000541496 SIPA1L3O60292 1781 aaPredicted RBP6.37□□□□□ -1.39
SPARCL1-209ENST00000541496 PTPRCP08575 1304 aa6.37□□□□□ -1.39
SPARCL1-209ENST00000541496 RNF123Q5XPI4 1314 aa6.37□□□□□ -1.39
SPARCL1-209ENST00000541496 A0A087WZG4 1122 aa6.37□□□□□ -1.39
SPARCL1-209ENST00000541496 CENPBP07199 599 aaPredicted RBP6.37□□□□□ -1.39
SPARCL1-209ENST00000541496 SSFA2P28290 1259 aa6.37□□□□□ -1.39
SPARCL1-209ENST00000541496 KCNQ4P56696 695 aa6.37□□□□□ -1.39
SPARCL1-209ENST00000541496 PROSER3Q2NL68 480 aa6.37□□□□□ -1.39
SPARCL1-209ENST00000541496 SMC4Q9NTJ3 1288 aa6.37□□□□□ -1.39
SPARCL1-209ENST00000541496 RTCBQ9Y3I0 505 aaKnown RBP6.37□□□□□ -1.39
SPARCL1-209ENST00000541496 BRWD3Q6RI45 1802 aa6.36□□□□□ -1.39
SPARCL1-209ENST00000541496 KDM3BQ7LBC6 1761 aa6.36□□□□□ -1.39
SPARCL1-209ENST00000541496 ZNF831Q5JPB2 1677 aa6.36□□□□□ -1.39
SPARCL1-209ENST00000541496 ERVV-1B6SEH8 477 aa6.36□□□□□ -1.39
SPARCL1-209ENST00000541496 C3orf80F5H4A9 247 aa6.36□□□□□ -1.39
SPARCL1-209ENST00000541496 IPO8O15397 1037 aaKnown RBP6.36□□□□□ -1.39
SPARCL1-209ENST00000541496 BCAR3O75815 825 aa6.36□□□□□ -1.39
SPARCL1-209ENST00000541496 PPP4CP60510 307 aa6.36□□□□□ -1.39
SPARCL1-209ENST00000541496 FLIIQ13045 1269 aa6.36□□□□□ -1.39
SPARCL1-209ENST00000541496 MAP2K5Q13163 448 aa6.36□□□□□ -1.39
SPARCL1-209ENST00000541496 FLAD1Q8NFF5 587 aa6.36□□□□□ -1.39
SPARCL1-209ENST00000541496 PXYLP1Q8TE99 480 aa6.36□□□□□ -1.39
SPARCL1-209ENST00000541496 AK7Q96M32 723 aa6.36□□□□□ -1.39
SPARCL1-209ENST00000541496 TMEM134Q9H6X4 195 aa6.36□□□□□ -1.39
SPARCL1-209ENST00000541496 HPS5Q9UPZ3 1129 aa6.36□□□□□ -1.39
SPARCL1-209ENST00000541496 UBR2Q8IWV8 1755 aa6.36□□□□□ -1.39
SPARCL1-209ENST00000541496 COL15A1P39059 1388 aa6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 IBTKQ9P2D0 1353 aaPredicted RBP6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 RCCD1A6NED2 376 aa6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 TCERG1O14776 1098 aaKnown RBP6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 DDX58O95786 925 aaKnown RBP6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 MYL6BP14649 208 aa6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 CANXP27824 592 aaKnown RBP6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 SLC15A2Q16348 729 aa6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 ZNF827Q17R98 1081 aa6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 CLEC4GQ6UXB4 293 aa6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 KSR2Q6VAB6 950 aa6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 ATF7IPQ6VMQ6 1270 aa6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 COPS6Q7L5N1 327 aa6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 G2E3Q7L622 706 aa6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 NPM2Q86SE8 214 aaKnown RBP6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 METTL3Q86U44 580 aaKnown RBP6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 AMIGO3Q86WK7 504 aa6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 PLBD2Q8NHP8 589 aa6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 XAGE3Q8WTP9 111 aa6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 PRR14Q9BWN1 585 aa6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 BCL2L13Q9BXK5 485 aa6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 API5Q9BZZ5 524 aaKnown RBP6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 PHAXQ9H814 394 aaKnown RBP6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 STK32BQ9NY57 414 aa6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 C5P01031 1676 aa6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 DLG5Q8TDM6 1919 aa6.35□□□□□ -1.39
SPARCL1-209ENST00000541496 RGPD3A6NKT7 1758 aaPredicted RBP6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 RGPD4Q7Z3J3 1758 aa6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 TNS1Q9HBL0 1735 aaKnown RBP6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 MAP3K15Q6ZN16 1313 aa6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 USP42Q9H9J4 1324 aaKnown RBP6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 CAMTA2O94983 1202 aa6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 ANXA1P04083 346 aa6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 MS4A1P11836 297 aa6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 TRIM27P14373 513 aa6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 PIP4K2AP48426 406 aaPredicted RBP6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 TRIM28Q13263 835 aaKnown RBP6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 FKBP5Q13451 457 aaPredicted RBP6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 PDE3AQ14432 1141 aa6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 TRAPPC3LQ5T215 181 aa6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 SWT1Q5T5J6 900 aaKnown RBP6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 ZKSCAN2Q63HK3 967 aa6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 KIF6Q6ZMV9 814 aa6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 TTLL7Q6ZT98 887 aa6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 DZIP3Q86Y13 1208 aaKnown RBP6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 WBP1LQ9NX94 342 aa6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 TFCP2L1Q9NZI6 479 aa6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 NARFQ9UHQ1 456 aa6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 NOB1Q9ULX3 412 aaKnown RBP6.34□□□□□ -1.39
SPARCL1-209ENST00000541496 BTAF1O14981 1849 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms