RNA–Protein interactions for RNA: ENST00000541335.1

KDM5A-208, Transcript of lysine demethylase 5A, humanhuman

TSL 2

Gene KDM5A, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-208ENST00000541335 PCSK7Q16549 785 aa6.56□□□□□ -1.36
KDM5A-208ENST00000541335 DHX32Q7L7V1 743 aaKnown RBP6.56□□□□□ -1.36
KDM5A-208ENST00000541335 DMRTC2Q8IXT2 367 aaPredicted RBP6.56□□□□□ -1.36
KDM5A-208ENST00000541335 LPIN3Q9BQK8 851 aa6.56□□□□□ -1.36
KDM5A-208ENST00000541335 LRFN2Q9ULH4 789 aa6.56□□□□□ -1.36
KDM5A-208ENST00000541335 NOVA2Q9UNW9 492 aaKnown RBP6.56□□□□□ -1.36
KDM5A-208ENST00000541335 ZBTB42B2RXF5 422 aa6.55□□□□□ -1.36
KDM5A-208ENST00000541335 OPLAHO14841 1288 aa6.55□□□□□ -1.36
KDM5A-208ENST00000541335 SASH3O75995 380 aa6.55□□□□□ -1.36
KDM5A-208ENST00000541335 RARAP10276 462 aa6.55□□□□□ -1.36
KDM5A-208ENST00000541335 RFX1P22670 979 aa6.55□□□□□ -1.36
KDM5A-208ENST00000541335 FKBP5Q13451 457 aaPredicted RBP6.55□□□□□ -1.36
KDM5A-208ENST00000541335 GRIK5Q16478 980 aa6.55□□□□□ -1.36
KDM5A-208ENST00000541335 PERM1Q5SV97 790 aa6.55□□□□□ -1.36
KDM5A-208ENST00000541335 ZMYM1Q5SVZ6 1142 aa6.55□□□□□ -1.36
KDM5A-208ENST00000541335 SHISA2Q6UWI4 295 aa6.55□□□□□ -1.36
KDM5A-208ENST00000541335 FMR1NBQ8N0W7 255 aaPredicted RBP6.55□□□□□ -1.36
KDM5A-208ENST00000541335 TRPM4Q8TD43 1214 aa6.55□□□□□ -1.36
KDM5A-208ENST00000541335 LENG1Q96BZ8 264 aaPredicted RBP6.55□□□□□ -1.36
KDM5A-208ENST00000541335 FRRS1LQ9P0K9 344 aa6.55□□□□□ -1.36
KDM5A-208ENST00000541335 GPLD1P80108 840 aa6.54□□□□□ -1.36
KDM5A-208ENST00000541335 NRG1Q02297 640 aaPredicted RBP6.54□□□□□ -1.36
KDM5A-208ENST00000541335 MLLT1Q03111 559 aaPredicted RBP6.54□□□□□ -1.36
KDM5A-208ENST00000541335 PLAURQ03405 335 aa6.54□□□□□ -1.36
KDM5A-208ENST00000541335 TXNRD3Q86VQ6 643 aa6.54□□□□□ -1.36
KDM5A-208ENST00000541335 PRIMPOLQ96LW4 560 aa6.54□□□□□ -1.36
KDM5A-208ENST00000541335 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.54□□□□□ -1.36
KDM5A-208ENST00000541335 USP20Q9Y2K6 914 aa6.54□□□□□ -1.36
KDM5A-208ENST00000541335 RTCBQ9Y3I0 505 aaKnown RBP6.54□□□□□ -1.36
KDM5A-208ENST00000541335 SWI5Q1ZZU3 235 aa6.53□□□□□ -1.36
KDM5A-208ENST00000541335 FOXD4L6Q3SYB3 417 aaPredicted RBP6.53□□□□□ -1.36
KDM5A-208ENST00000541335 COX20Q5RI15 118 aa6.53□□□□□ -1.36
KDM5A-208ENST00000541335 MSL1Q68DK7 614 aa6.53□□□□□ -1.36
KDM5A-208ENST00000541335 ELMSAN1Q6PJG2 1045 aa6.53□□□□□ -1.36
KDM5A-208ENST00000541335 FOXD4L3Q6VB84 417 aaPredicted RBP6.53□□□□□ -1.36
KDM5A-208ENST00000541335 TREML1Q86YW5 311 aa6.53□□□□□ -1.36
KDM5A-208ENST00000541335 ZMIZ1Q9ULJ6 1067 aa6.53□□□□□ -1.36
KDM5A-208ENST00000541335 ACIN1Q9UKV3 1341 aaKnown RBP6.52□□□□□ -1.37
KDM5A-208ENST00000541335 EGFRP00533 1210 aa6.52□□□□□ -1.37
KDM5A-208ENST00000541335 NRLP54845 237 aa6.52□□□□□ -1.37
KDM5A-208ENST00000541335 DTWD1Q8N5C7 304 aa6.52□□□□□ -1.37
KDM5A-208ENST00000541335 TTC9Q92623 222 aa6.52□□□□□ -1.37
KDM5A-208ENST00000541335 TLR7Q9NYK1 1049 aaKnown RBP6.52□□□□□ -1.37
KDM5A-208ENST00000541335 PRMT3O60678 531 aa6.51□□□□□ -1.37
KDM5A-208ENST00000541335 XYLBO75191 536 aa6.51□□□□□ -1.37
KDM5A-208ENST00000541335 H2AFB1P0C5Y9 115 aa6.51□□□□□ -1.37
KDM5A-208ENST00000541335 H2AFB2P0C5Z0 115 aa6.51□□□□□ -1.37
KDM5A-208ENST00000541335 FAM69CQ0P6D2 419 aa6.51□□□□□ -1.37
KDM5A-208ENST00000541335 ELOAQ14241 798 aaKnown RBP6.51□□□□□ -1.37
KDM5A-208ENST00000541335 OCLNQ16625 522 aa6.51□□□□□ -1.37
KDM5A-208ENST00000541335 HFE2Q6ZVN8 426 aa6.51□□□□□ -1.37
KDM5A-208ENST00000541335 FBXO11Q86XK2 927 aa6.51□□□□□ -1.37
KDM5A-208ENST00000541335 WFDC8Q8IUA0 241 aa6.51□□□□□ -1.37
KDM5A-208ENST00000541335 RGL4Q8IZJ4 473 aa6.51□□□□□ -1.37
KDM5A-208ENST00000541335 CMTR1Q8N1G2 835 aaKnown RBP6.51□□□□□ -1.37
KDM5A-208ENST00000541335 USP21Q9UK80 565 aa6.51□□□□□ -1.37
KDM5A-208ENST00000541335 ARID4AP29374 1257 aaPredicted RBP6.5□□□□□ -1.37
KDM5A-208ENST00000541335 PRSS36Q5K4E3 855 aa6.5□□□□□ -1.37
KDM5A-208ENST00000541335 STK32AQ8WU08 396 aa6.5□□□□□ -1.37
KDM5A-208ENST00000541335 SSBP4Q9BWG4 385 aaPredicted RBP6.5□□□□□ -1.37
KDM5A-208ENST00000541335 SMG9Q9H0W8 520 aaKnown RBP6.5□□□□□ -1.37
KDM5A-208ENST00000541335 KCNMB2Q9Y691 235 aa6.5□□□□□ -1.37
KDM5A-208ENST00000541335 MMP20O60882 483 aa6.49□□□□□ -1.37
KDM5A-208ENST00000541335 EIF2AK2P19525 551 aaKnown RBP6.49□□□□□ -1.37
KDM5A-208ENST00000541335 SRPK2P78362 688 aaKnown RBP6.49□□□□□ -1.37
KDM5A-208ENST00000541335 ETFBKMTQ8IXQ9 262 aa6.49□□□□□ -1.37
KDM5A-208ENST00000541335 SAP130Q9H0E3 1048 aa6.49□□□□□ -1.37
KDM5A-208ENST00000541335 LOC102724428A0A0B4J2F2 783 aa6.48□□□□□ -1.37
KDM5A-208ENST00000541335 PSAPP07602 524 aa6.48□□□□□ -1.37
KDM5A-208ENST00000541335 HOXD8P13378 290 aaPredicted RBP6.48□□□□□ -1.37
KDM5A-208ENST00000541335 SIK1P57059 783 aa6.48□□□□□ -1.37
KDM5A-208ENST00000541335 C16orf46Q6P387 395 aa6.48□□□□□ -1.37
KDM5A-208ENST00000541335 TP53INP1Q96A56 240 aa6.48□□□□□ -1.37
KDM5A-208ENST00000541335 PLD4Q96BZ4 506 aa6.48□□□□□ -1.37
KDM5A-208ENST00000541335 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.47□□□□□ -1.37
KDM5A-208ENST00000541335 J3QW42 95 aa6.47□□□□□ -1.37
KDM5A-208ENST00000541335 TNFRSF10BO14763 440 aa6.47□□□□□ -1.37
KDM5A-208ENST00000541335 DEAF1O75398 565 aaPredicted RBP6.47□□□□□ -1.37
KDM5A-208ENST00000541335 BRD2P25440 801 aaKnown RBP6.47□□□□□ -1.37
KDM5A-208ENST00000541335 TRIP4Q15650 581 aaPredicted RBP6.47□□□□□ -1.37
KDM5A-208ENST00000541335 FAM26DQ5JW98 314 aa6.47□□□□□ -1.37
KDM5A-208ENST00000541335 WFDC12Q8WWY7 111 aa6.47□□□□□ -1.37
KDM5A-208ENST00000541335 COL26A1Q96A83 441 aa6.47□□□□□ -1.37
KDM5A-208ENST00000541335 NSUN5Q96P11 429 aaKnown RBP6.47□□□□□ -1.37
KDM5A-208ENST00000541335 CXXC1Q9P0U4 656 aaPredicted RBP6.47□□□□□ -1.37
KDM5A-208ENST00000541335 SCO2A0A1W2PP80 73 aa6.46□□□□□ -1.38
KDM5A-208ENST00000541335 DLL1O00548 723 aa6.46□□□□□ -1.38
KDM5A-208ENST00000541335 ATG7O95352 703 aa6.46□□□□□ -1.38
KDM5A-208ENST00000541335 NOS3P29474 1203 aa6.46□□□□□ -1.38
KDM5A-208ENST00000541335 SOX18P35713 384 aa6.46□□□□□ -1.38
KDM5A-208ENST00000541335 IGF2-ASQ6U949 168 aa6.46□□□□□ -1.38
KDM5A-208ENST00000541335 CAPN12Q6ZSI9 719 aa6.46□□□□□ -1.38
KDM5A-208ENST00000541335 MKNK1Q9BUB5 465 aa6.46□□□□□ -1.38
KDM5A-208ENST00000541335 IREB2P48200 963 aaKnown RBP6.45□□□□□ -1.38
KDM5A-208ENST00000541335 ARTNQ5T4W7 220 aa6.45□□□□□ -1.38
KDM5A-208ENST00000541335 TMEM164Q5U3C3 297 aa6.45□□□□□ -1.38
KDM5A-208ENST00000541335 NLRP13Q86W25 1043 aa6.45□□□□□ -1.38
KDM5A-208ENST00000541335 GHRHP01286 108 aa6.44□□□□□ -1.38
KDM5A-208ENST00000541335 GDF6Q6KF10 455 aaPredicted RBP6.44□□□□□ -1.38
KDM5A-208ENST00000541335 UBAP1LF5GYI3 381 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms