RNA–Protein interactions for RNA: ENST00000541329.1

NPIPB4-213, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 432 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-213ENST00000541329 SALL3Q9BXA9 1300 aa9.29□□□□□ -0.92
NPIPB4-213ENST00000541329 TRIM6-TRIM34B2RNG4 842 aa9.28□□□□□ -0.92
NPIPB4-213ENST00000541329 CDC45O75419 566 aa9.28□□□□□ -0.92
NPIPB4-213ENST00000541329 SASH1O94885 1247 aa9.28□□□□□ -0.92
NPIPB4-213ENST00000541329 CAMTA2O94983 1202 aa9.28□□□□□ -0.92
NPIPB4-213ENST00000541329 PCCAP05165 728 aaPredicted RBP9.28□□□□□ -0.92
NPIPB4-213ENST00000541329 SDSP20132 328 aa9.28□□□□□ -0.92
NPIPB4-213ENST00000541329 RFX5P48382 616 aaPredicted RBP9.28□□□□□ -0.92
NPIPB4-213ENST00000541329 TRIM28Q13263 835 aaKnown RBP9.28□□□□□ -0.92
NPIPB4-213ENST00000541329 RABL6Q3YEC7 729 aaPredicted RBP9.28□□□□□ -0.92
NPIPB4-213ENST00000541329 TBC1D9Q6ZT07 1266 aa9.28□□□□□ -0.92
NPIPB4-213ENST00000541329 AACSQ86V21 672 aa9.28□□□□□ -0.92
NPIPB4-213ENST00000541329 ZBTB38Q8NAP3 1195 aaPredicted RBP9.28□□□□□ -0.92
NPIPB4-213ENST00000541329 RILPL2Q969X0 211 aa9.28□□□□□ -0.92
NPIPB4-213ENST00000541329 ZNF594Q96JF6 807 aaPredicted RBP9.28□□□□□ -0.92
NPIPB4-213ENST00000541329 RRAGDQ9NQL2 400 aaPredicted RBP9.28□□□□□ -0.92
NPIPB4-213ENST00000541329 PPP1R1BQ9UD71 204 aaPredicted RBP9.28□□□□□ -0.92
NPIPB4-213ENST00000541329 TRMT112Q9UI30 125 aaKnown RBP9.28□□□□□ -0.92
NPIPB4-213ENST00000541329 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.28□□□□□ -0.92
NPIPB4-213ENST00000541329 UBN2Q6ZU65 1347 aa9.28□□□□□ -0.92
NPIPB4-213ENST00000541329 GOLGA6L3A6NEY3 463 aa9.27□□□□□ -0.93
NPIPB4-213ENST00000541329 GNPATO15228 680 aa9.27□□□□□ -0.93
NPIPB4-213ENST00000541329 TRIM37O94972 964 aa9.27□□□□□ -0.93
NPIPB4-213ENST00000541329 IFIT2P09913 472 aaKnown RBP9.27□□□□□ -0.93
NPIPB4-213ENST00000541329 PTPN12Q05209 780 aaKnown RBP9.27□□□□□ -0.93
NPIPB4-213ENST00000541329 FAM196AQ6ZSG2 479 aa9.27□□□□□ -0.93
NPIPB4-213ENST00000541329 ZNF34Q8IZ26 560 aa9.27□□□□□ -0.93
NPIPB4-213ENST00000541329 CLASRPQ8N2M8 674 aaKnown RBP9.27□□□□□ -0.93
NPIPB4-213ENST00000541329 TBC1D32Q96NH3 1257 aa9.27□□□□□ -0.93
NPIPB4-213ENST00000541329 BCL11BQ9C0K0 894 aaPredicted RBP9.27□□□□□ -0.93
NPIPB4-213ENST00000541329 CCDC8Q9H0W5 538 aaPredicted RBP9.27□□□□□ -0.93
NPIPB4-213ENST00000541329 OSBPL3Q9H4L5 887 aa9.27□□□□□ -0.93
NPIPB4-213ENST00000541329 STAP2Q9UGK3 403 aa9.27□□□□□ -0.93
NPIPB4-213ENST00000541329 CNTNAP4Q9C0A0 1308 aa9.27□□□□□ -0.93
NPIPB4-213ENST00000541329 IRS4O14654 1257 aaPredicted RBP9.26□□□□□ -0.93
NPIPB4-213ENST00000541329 PHF14O94880 888 aa9.26□□□□□ -0.93
NPIPB4-213ENST00000541329 EN1Q05925 392 aaPredicted RBP9.26□□□□□ -0.93
NPIPB4-213ENST00000541329 TFCP2Q12800 502 aa9.26□□□□□ -0.93
NPIPB4-213ENST00000541329 TAF7LQ5H9L4 462 aa9.26□□□□□ -0.93
NPIPB4-213ENST00000541329 SUSD4Q5VX71 490 aa9.26□□□□□ -0.93
NPIPB4-213ENST00000541329 BICDL1Q6ZP65 573 aa9.26□□□□□ -0.93
NPIPB4-213ENST00000541329 COPRSQ9NQ92 184 aa9.26□□□□□ -0.93
NPIPB4-213ENST00000541329 SRP68Q9UHB9 627 aaKnown RBP9.26□□□□□ -0.93
NPIPB4-213ENST00000541329 NIP7Q9Y221 180 aaKnown RBP eCLIP9.26□□□□□ -0.93
NPIPB4-213ENST00000541329 CDHR2Q9BYE9 1310 aa9.26□□□□□ -0.93
NPIPB4-213ENST00000541329 UBR3Q6ZT12 1888 aa9.25□□□□□ -0.93
NPIPB4-213ENST00000541329 RRP9O43818 475 aaKnown RBP9.25□□□□□ -0.93
NPIPB4-213ENST00000541329 HCLS1P14317 486 aaPredicted RBP9.25□□□□□ -0.93
NPIPB4-213ENST00000541329 CCDC57Q2TAC2 916 aa9.25□□□□□ -0.93
NPIPB4-213ENST00000541329 LRRC24Q50LG9 513 aa9.25□□□□□ -0.93
NPIPB4-213ENST00000541329 RC3H1Q5TC82 1133 aaKnown RBP9.25□□□□□ -0.93
NPIPB4-213ENST00000541329 CASC1Q6TDU7 716 aa9.25□□□□□ -0.93
NPIPB4-213ENST00000541329 EAF2Q96CJ1 260 aaPredicted RBP9.25□□□□□ -0.93
NPIPB4-213ENST00000541329 GPATCH3Q96I76 525 aa9.25□□□□□ -0.93
NPIPB4-213ENST00000541329 UTP14AQ9BVJ6 771 aaKnown RBP9.25□□□□□ -0.93
NPIPB4-213ENST00000541329 TLR7Q9NYK1 1049 aaKnown RBP9.25□□□□□ -0.93
NPIPB4-213ENST00000541329 ZNF652Q9Y2D9 606 aa9.25□□□□□ -0.93
NPIPB4-213ENST00000541329 RTCBQ9Y3I0 505 aaKnown RBP9.25□□□□□ -0.93
NPIPB4-213ENST00000541329 AOX1Q06278 1338 aa9.25□□□□□ -0.93
NPIPB4-213ENST00000541329 TAF1P21675 1872 aa9.24□□□□□ -0.93
NPIPB4-213ENST00000541329 PDE8AO60658 829 aa9.24□□□□□ -0.93
NPIPB4-213ENST00000541329 RPS6KA4O75676 772 aa9.24□□□□□ -0.93
NPIPB4-213ENST00000541329 CAPN15O75808 1086 aa9.24□□□□□ -0.93
NPIPB4-213ENST00000541329 PTMSP20962 102 aa9.24□□□□□ -0.93
NPIPB4-213ENST00000541329 MCM4P33991 863 aa9.24□□□□□ -0.93
NPIPB4-213ENST00000541329 MRE11P49959 708 aa9.24□□□□□ -0.93
NPIPB4-213ENST00000541329 CTSWP56202 376 aa9.24□□□□□ -0.93
NPIPB4-213ENST00000541329 USPL1Q5W0Q7 1092 aa9.24□□□□□ -0.93
NPIPB4-213ENST00000541329 PI4K2BQ8TCG2 481 aa9.24□□□□□ -0.93
NPIPB4-213ENST00000541329 AK7Q96M32 723 aa9.24□□□□□ -0.93
NPIPB4-213ENST00000541329 PLA2G12BQ9BX93 195 aa9.24□□□□□ -0.93
NPIPB4-213ENST00000541329 PUS3Q9BZE2 481 aaKnown RBP9.24□□□□□ -0.93
NPIPB4-213ENST00000541329 C22orf23Q9BZE7 217 aa9.24□□□□□ -0.93
NPIPB4-213ENST00000541329 GREM2Q9H772 168 aa9.24□□□□□ -0.93
NPIPB4-213ENST00000541329 LRRC4BQ9NT99 713 aa9.24□□□□□ -0.93
NPIPB4-213ENST00000541329 CHMP5Q9NZZ3 219 aa9.24□□□□□ -0.93
NPIPB4-213ENST00000541329 COL24A1Q17RW2 1714 aa9.24□□□□□ -0.93
NPIPB4-213ENST00000541329 TNS1Q9HBL0 1735 aaKnown RBP9.23□□□□□ -0.93
NPIPB4-213ENST00000541329 ZPR1O75312 459 aa9.23□□□□□ -0.93
NPIPB4-213ENST00000541329 CSF1RP07333 972 aa9.23□□□□□ -0.93
NPIPB4-213ENST00000541329 XRCC6P12956 609 aaKnown RBP eCLIP9.23□□□□□ -0.93
NPIPB4-213ENST00000541329 PRELPP51888 382 aa9.23□□□□□ -0.93
NPIPB4-213ENST00000541329 IFIT5Q13325 482 aaKnown RBP9.23□□□□□ -0.93
NPIPB4-213ENST00000541329 PARP10Q53GL7 1025 aa9.23□□□□□ -0.93
NPIPB4-213ENST00000541329 TNNI3KQ59H18 835 aa9.23□□□□□ -0.93
NPIPB4-213ENST00000541329 TBC1D9BQ66K14 1250 aa9.23□□□□□ -0.93
NPIPB4-213ENST00000541329 ATG9AQ7Z3C6 839 aa9.23□□□□□ -0.93
NPIPB4-213ENST00000541329 AMIGO3Q86WK7 504 aa9.23□□□□□ -0.93
NPIPB4-213ENST00000541329 TTLL11Q8NHH1 800 aa9.23□□□□□ -0.93
NPIPB4-213ENST00000541329 TBC1D2Q9BYX2 928 aa9.23□□□□□ -0.93
NPIPB4-213ENST00000541329 SPON1Q9HCB6 807 aa9.23□□□□□ -0.93
NPIPB4-213ENST00000541329 ECHDC1Q9NTX5 307 aa9.23□□□□□ -0.93
NPIPB4-213ENST00000541329 FPGT-TNNI3KV9GXZ4 949 aa9.23□□□□□ -0.93
NPIPB4-213ENST00000541329 TTC41PQ6P2S7 1318 aa9.23□□□□□ -0.93
NPIPB4-213ENST00000541329 SH3TC1Q8TE82 1336 aa9.23□□□□□ -0.93
NPIPB4-213ENST00000541329 USP42Q9H9J4 1324 aaKnown RBP9.23□□□□□ -0.93
NPIPB4-213ENST00000541329 ANKRD18BA2A2Z9 1011 aa9.22□□□□□ -0.93
NPIPB4-213ENST00000541329 DDX11L8A8MPP1 907 aa9.22□□□□□ -0.93
NPIPB4-213ENST00000541329 EYA2O00167 538 aa9.22□□□□□ -0.93
NPIPB4-213ENST00000541329 ERC2O15083 957 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms