RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 TGFBR3LH3BV60 316 aa9.36□□□□□ -0.91
SUDS3-202ENST00000541280 SRPK2P78362 688 aaKnown RBP9.36□□□□□ -0.91
SUDS3-202ENST00000541280 NEUROD1Q13562 356 aa9.36□□□□□ -0.91
SUDS3-202ENST00000541280 FAM200AQ8TCP9 573 aa9.36□□□□□ -0.91
SUDS3-202ENST00000541280 NGLY1Q96IV0 654 aa9.36□□□□□ -0.91
SUDS3-202ENST00000541280 BCS1LQ9Y276 419 aa9.36□□□□□ -0.91
SUDS3-202ENST00000541280 MSTNO14793 375 aa9.35□□□□□ -0.91
SUDS3-202ENST00000541280 PROCP04070 461 aa9.35□□□□□ -0.91
SUDS3-202ENST00000541280 ALAS2P22557 587 aa9.35□□□□□ -0.91
SUDS3-202ENST00000541280 FAM69CQ0P6D2 419 aa9.35□□□□□ -0.91
SUDS3-202ENST00000541280 MYO19Q96H55 970 aa9.35□□□□□ -0.91
SUDS3-202ENST00000541280 SPOCK3Q9BQ16 436 aa9.35□□□□□ -0.91
SUDS3-202ENST00000541280 PRDM6Q9NQX0 595 aa9.35□□□□□ -0.91
SUDS3-202ENST00000541280 NOVA2Q9UNW9 492 aaKnown RBP9.35□□□□□ -0.91
SUDS3-202ENST00000541280 GOLGA3Q08378 1498 aa9.34□□□□□ -0.91
SUDS3-202ENST00000541280 SWI5Q1ZZU3 235 aa9.34□□□□□ -0.91
SUDS3-202ENST00000541280 ZMYND15Q9H091 742 aa9.34□□□□□ -0.91
SUDS3-202ENST00000541280 QTRT2Q9H974 415 aaKnown RBP9.34□□□□□ -0.91
SUDS3-202ENST00000541280 TTBK1Q5TCY1 1321 aaPredicted RBP9.33□□□□□ -0.92
SUDS3-202ENST00000541280 UACAQ9BZF9 1416 aa9.33□□□□□ -0.92
SUDS3-202ENST00000541280 UGGT2Q9NYU1 1516 aa9.33□□□□□ -0.92
SUDS3-202ENST00000541280 LGR5O75473 907 aa9.33□□□□□ -0.92
SUDS3-202ENST00000541280 RFX1P22670 979 aa9.33□□□□□ -0.92
SUDS3-202ENST00000541280 IQGAP2Q13576 1575 aa9.33□□□□□ -0.92
SUDS3-202ENST00000541280 ACIN1Q9UKV3 1341 aaKnown RBP9.32□□□□□ -0.92
SUDS3-202ENST00000541280 TRIM11Q96F44 468 aa9.32□□□□□ -0.92
SUDS3-202ENST00000541280 ZMIZ1Q9ULJ6 1067 aa9.32□□□□□ -0.92
SUDS3-202ENST00000541280 ADH7P40394 386 aa9.31□□□□□ -0.92
SUDS3-202ENST00000541280 SUZ12Q15022 739 aaKnown RBP9.31□□□□□ -0.92
SUDS3-202ENST00000541280 C11orf16Q9NQ32 467 aa9.31□□□□□ -0.92
SUDS3-202ENST00000541280 STARD13Q9Y3M8 1113 aa9.31□□□□□ -0.92
SUDS3-202ENST00000541280 UHRF1BP1LA0JNW5 1464 aa9.31□□□□□ -0.92
SUDS3-202ENST00000541280 GRNP28799 593 aaKnown RBP9.3□□□□□ -0.92
SUDS3-202ENST00000541280 INPP5BP32019 993 aa9.3□□□□□ -0.92
SUDS3-202ENST00000541280 COL9A3Q14050 684 aaPredicted RBP9.3□□□□□ -0.92
SUDS3-202ENST00000541280 CDCA8Q53HL2 280 aa9.3□□□□□ -0.92
SUDS3-202ENST00000541280 RAB44Q7Z6P3 723 aaPredicted RBP9.3□□□□□ -0.92
SUDS3-202ENST00000541280 GSX2Q9BZM3 304 aa9.3□□□□□ -0.92
SUDS3-202ENST00000541280 DISP1Q96F81 1524 aa9.3□□□□□ -0.92
SUDS3-202ENST00000541280 ABCC10Q5T3U5 1492 aa9.29□□□□□ -0.92
SUDS3-202ENST00000541280 ATG7O95352 703 aa9.29□□□□□ -0.92
SUDS3-202ENST00000541280 C20orf204Q6ZNR8 217 aa9.29□□□□□ -0.92
SUDS3-202ENST00000541280 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.29□□□□□ -0.92
SUDS3-202ENST00000541280 KLK14Q9P0G3 267 aa9.29□□□□□ -0.92
SUDS3-202ENST00000541280 ABCC2Q92887 1545 aa9.29□□□□□ -0.92
SUDS3-202ENST00000541280 PLB1Q6P1J6 1458 aa9.28□□□□□ -0.92
SUDS3-202ENST00000541280 MAPKBP1O60336 1514 aa9.28□□□□□ -0.92
SUDS3-202ENST00000541280 EPB42P16452 691 aa9.28□□□□□ -0.92
SUDS3-202ENST00000541280 DGKZQ13574 1117 aa9.28□□□□□ -0.92
SUDS3-202ENST00000541280 OCLNQ16625 522 aa9.28□□□□□ -0.92
SUDS3-202ENST00000541280 C11orf91Q3C1V1 193 aa9.28□□□□□ -0.92
SUDS3-202ENST00000541280 MICALL1Q8N3F8 863 aa9.28□□□□□ -0.92
SUDS3-202ENST00000541280 BHMTQ93088 406 aa9.28□□□□□ -0.92
SUDS3-202ENST00000541280 M0R082 166 aa9.27□□□□□ -0.93
SUDS3-202ENST00000541280 ALBP02768 609 aa9.27□□□□□ -0.93
SUDS3-202ENST00000541280 IDH3AP50213 366 aa9.27□□□□□ -0.93
SUDS3-202ENST00000541280 FKBP5Q13451 457 aaPredicted RBP9.27□□□□□ -0.93
SUDS3-202ENST00000541280 CCINQ13939 588 aa9.27□□□□□ -0.93
SUDS3-202ENST00000541280 ZNF417Q8TAU3 575 aa9.27□□□□□ -0.93
SUDS3-202ENST00000541280 COL26A1Q96A83 441 aa9.27□□□□□ -0.93
SUDS3-202ENST00000541280 VTI1AQ96AJ9 217 aa9.27□□□□□ -0.93
SUDS3-202ENST00000541280 ZNF587Q96SQ5 575 aaPredicted RBP9.27□□□□□ -0.93
SUDS3-202ENST00000541280 PLVAPQ9BX97 442 aa9.27□□□□□ -0.93
SUDS3-202ENST00000541280 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.26□□□□□ -0.93
SUDS3-202ENST00000541280 SPDYE3A6NKU9 549 aa9.26□□□□□ -0.93
SUDS3-202ENST00000541280 ARSDP51689 593 aa9.26□□□□□ -0.93
SUDS3-202ENST00000541280 STK32AQ8WU08 396 aa9.26□□□□□ -0.93
SUDS3-202ENST00000541280 LRFN2Q9ULH4 789 aa9.26□□□□□ -0.93
SUDS3-202ENST00000541280 MICAL2O94851 1124 aa9.25□□□□□ -0.93
SUDS3-202ENST00000541280 SPATA31C1P0DKV0 1188 aa9.25□□□□□ -0.93
SUDS3-202ENST00000541280 CD163Q86VB7 1156 aa9.25□□□□□ -0.93
SUDS3-202ENST00000541280 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.25□□□□□ -0.93
SUDS3-202ENST00000541280 ASXL2Q76L83 1435 aa9.24□□□□□ -0.93
SUDS3-202ENST00000541280 LOC100996750A0A140TA64 210 aa9.24□□□□□ -0.93
SUDS3-202ENST00000541280 C1QTNF9BB2RNN3 333 aa9.24□□□□□ -0.93
SUDS3-202ENST00000541280 MAP3K6O95382 1288 aa9.24□□□□□ -0.93
SUDS3-202ENST00000541280 NID1P14543 1247 aa9.24□□□□□ -0.93
SUDS3-202ENST00000541280 PBXIP1Q96AQ6 731 aa9.24□□□□□ -0.93
SUDS3-202ENST00000541280 KRTAP4-6Q9BYQ5 205 aa9.24□□□□□ -0.93
SUDS3-202ENST00000541280 SERPINA10Q9UK55 444 aa9.24□□□□□ -0.93
SUDS3-202ENST00000541280 SLC6A14Q9UN76 642 aa9.24□□□□□ -0.93
SUDS3-202ENST00000541280 KDM5BQ9UGL1 1544 aa9.24□□□□□ -0.93
SUDS3-202ENST00000541280 CHRNA4P43681 627 aa9.23□□□□□ -0.93
SUDS3-202ENST00000541280 PRIMPOLQ96LW4 560 aa9.23□□□□□ -0.93
SUDS3-202ENST00000541280 PNMA5Q96PV4 448 aa9.23□□□□□ -0.93
SUDS3-202ENST00000541280 UBE2OQ9C0C9 1292 aaKnown RBP9.23□□□□□ -0.93
SUDS3-202ENST00000541280 OPLAHO14841 1288 aa9.22□□□□□ -0.93
SUDS3-202ENST00000541280 EGFRP00533 1210 aa9.22□□□□□ -0.93
SUDS3-202ENST00000541280 NFKB1P19838 968 aa9.22□□□□□ -0.93
SUDS3-202ENST00000541280 BAG6P46379 1132 aa9.22□□□□□ -0.93
SUDS3-202ENST00000541280 COX20Q5RI15 118 aa9.22□□□□□ -0.93
SUDS3-202ENST00000541280 IFT43Q96FT9 208 aa9.22□□□□□ -0.93
SUDS3-202ENST00000541280 CXXC1Q9P0U4 656 aaPredicted RBP9.22□□□□□ -0.93
SUDS3-202ENST00000541280 GTF3C3Q9Y5Q9 886 aa9.22□□□□□ -0.93
SUDS3-202ENST00000541280 KIAA0556O60303 1618 aa9.21□□□□□ -0.93
SUDS3-202ENST00000541280 ADCY10Q96PN6 1610 aa9.21□□□□□ -0.93
SUDS3-202ENST00000541280 PRMT3O60678 531 aa9.21□□□□□ -0.94
SUDS3-202ENST00000541280 TMEM164Q5U3C3 297 aa9.21□□□□□ -0.94
SUDS3-202ENST00000541280 C8orf86Q6ZUL3 223 aa9.21□□□□□ -0.94
SUDS3-202ENST00000541280 ILDR2Q71H61 639 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms