RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 SRP68Q9UHB9 627 aaKnown RBP15.01□□□□□ -0.01
AP003559.1-201ENST00000540906 COL4A1P02462 1669 aa15□□□□□ -0.01
AP003559.1-201ENST00000540906 GLRX3O76003 335 aaKnown RBP15□□□□□ -0.01
AP003559.1-201ENST00000540906 HCLS1P14317 486 aaPredicted RBP15□□□□□ -0.01
AP003559.1-201ENST00000540906 CTSWP56202 376 aa15□□□□□ -0.01
AP003559.1-201ENST00000540906 LRRC4BQ9NT99 713 aa15□□□□□ -0.01
AP003559.1-201ENST00000540906 EP400Q96L91 3159 aa15□□□□□ -0.01
AP003559.1-201ENST00000540906 NTSR2O95665 410 aa14.99□□□□□ -0.01
AP003559.1-201ENST00000540906 EDC3Q96F86 508 aaKnown RBP14.99□□□□□ -0.01
AP003559.1-201ENST00000540906 BOLA2Q9H3K6 86 aa14.99□□□□□ -0.01
AP003559.1-201ENST00000540906 NDUFB9Q9Y6M9 179 aa14.99□□□□□ -0.01
AP003559.1-201ENST00000540906 C4BP0C0L5 1744 aa14.99□□□□□ -0.01
AP003559.1-201ENST00000540906 ZNF609O15014 1411 aa14.99□□□□□ -0.01
AP003559.1-201ENST00000540906 RIC1Q4ADV7 1423 aa14.99□□□□□ -0.01
AP003559.1-201ENST00000540906 ERC2O15083 957 aa14.99□□□□□ -0.01
AP003559.1-201ENST00000540906 KRT27Q7Z3Y8 459 aa14.99□□□□□ -0.01
AP003559.1-201ENST00000540906 NIP7Q9Y221 180 aaKnown RBP eCLIP14.99□□□□□ -0.01
AP003559.1-201ENST00000540906 GNPATO15228 680 aa14.98□□□□□ -0.01
AP003559.1-201ENST00000540906 ITGA6P23229 1130 aa14.98□□□□□ -0.01
AP003559.1-201ENST00000540906 CCDC57Q2TAC2 916 aa14.98□□□□□ -0.01
AP003559.1-201ENST00000540906 BCL11BQ9C0K0 894 aaPredicted RBP14.98□□□□□ -0.01
AP003559.1-201ENST00000540906 C4AP0C0L4 1744 aa14.98□□□□□ -0.01
AP003559.1-201ENST00000540906 PDE8AO60658 829 aa14.97□□□□□ -0.01
AP003559.1-201ENST00000540906 RPS6KA4O75676 772 aa14.97□□□□□ -0.01
AP003559.1-201ENST00000540906 CIAO1O76071 339 aa14.97□□□□□ -0.01
AP003559.1-201ENST00000540906 CD2BP2O95400 341 aaKnown RBP14.97□□□□□ -0.01
AP003559.1-201ENST00000540906 IL15P40933 162 aaPredicted RBP14.97□□□□□ -0.01
AP003559.1-201ENST00000540906 TIMM10P62072 90 aa14.97□□□□□ -0.01
AP003559.1-201ENST00000540906 RC3H1Q5TC82 1133 aaKnown RBP14.97□□□□□ -0.01
AP003559.1-201ENST00000540906 CASC1Q6TDU7 716 aa14.97□□□□□ -0.01
AP003559.1-201ENST00000540906 UTP14AQ9BVJ6 771 aaKnown RBP14.97□□□□□ -0.01
AP003559.1-201ENST00000540906 LRP5O75197 1615 aa14.97□□□□□ -0.01
AP003559.1-201ENST00000540906 LAMB2P55268 1798 aa14.97□□□□□ -0.01
AP003559.1-201ENST00000540906 CASZ1Q86V15 1759 aa14.97□□□□□ -0.01
AP003559.1-201ENST00000540906 IFIT5Q13325 482 aaKnown RBP14.96□□□□□ -0.01
AP003559.1-201ENST00000540906 USPL1Q5W0Q7 1092 aa14.96□□□□□ -0.01
AP003559.1-201ENST00000540906 TBC1D9BQ66K14 1250 aa14.96□□□□□ -0.01
AP003559.1-201ENST00000540906 CNTROBQ8N137 903 aa14.96□□□□□ -0.01
AP003559.1-201ENST00000540906 SH3TC1Q8TE82 1336 aa14.96□□□□□ -0.01
AP003559.1-201ENST00000540906 GPATCH3Q96I76 525 aa14.96□□□□□ -0.01
AP003559.1-201ENST00000540906 CHGBP05060 677 aa14.96□□□□□ -0.01
AP003559.1-201ENST00000540906 C3orf67Q6ZVT6 689 aa14.96□□□□□ -0.01
AP003559.1-201ENST00000540906 TRIM37O94972 964 aa14.95□□□□□ -0.02
AP003559.1-201ENST00000540906 ADORA1P30542 326 aa14.95□□□□□ -0.02
AP003559.1-201ENST00000540906 BICDL1Q6ZP65 573 aa14.95□□□□□ -0.02
AP003559.1-201ENST00000540906 ERICH6Q7L0X2 663 aa14.95□□□□□ -0.02
AP003559.1-201ENST00000540906 SEC31BQ9NQW1 1179 aa14.95□□□□□ -0.02
AP003559.1-201ENST00000540906 RIPOR2Q9Y4F9 1068 aa14.95□□□□□ -0.02
AP003559.1-201ENST00000540906 SPEF2Q9C093 1822 aa14.95□□□□□ -0.02
AP003559.1-201ENST00000540906 ATP5JP18859 108 aa14.94□□□□□ -0.02
AP003559.1-201ENST00000540906 PARP10Q53GL7 1025 aa14.94□□□□□ -0.02
AP003559.1-201ENST00000540906 ARHGEF1Q92888 912 aaKnown RBP14.94□□□□□ -0.02
AP003559.1-201ENST00000540906 NEUROD6Q96NK8 337 aa14.94□□□□□ -0.02
AP003559.1-201ENST00000540906 PALD1Q9ULE6 856 aa14.94□□□□□ -0.02
AP003559.1-201ENST00000540906 COL24A1Q17RW2 1714 aa14.94□□□□□ -0.02
AP003559.1-201ENST00000540906 A0A1B0GUL7 405 aa14.94□□□□□ -0.02
AP003559.1-201ENST00000540906 SGSM2O43147 1006 aa14.94□□□□□ -0.02
AP003559.1-201ENST00000540906 REC8O95072 547 aa14.94□□□□□ -0.02
AP003559.1-201ENST00000540906 ERFEQ4G0M1 354 aa14.94□□□□□ -0.02
AP003559.1-201ENST00000540906 CWC27Q6UX04 472 aaKnown RBP14.94□□□□□ -0.02
AP003559.1-201ENST00000540906 FAM196AQ6ZSG2 479 aa14.94□□□□□ -0.02
AP003559.1-201ENST00000540906 GPR108Q9NPR9 543 aa14.94□□□□□ -0.02
AP003559.1-201ENST00000540906 ANO2Q9NQ90 1003 aa14.94□□□□□ -0.02
AP003559.1-201ENST00000540906 NARFQ9UHQ1 456 aa14.94□□□□□ -0.02
AP003559.1-201ENST00000540906 ABCC12Q96J65 1359 aa14.93□□□□□ -0.02
AP003559.1-201ENST00000540906 TAF1P21675 1872 aa14.93□□□□□ -0.02
AP003559.1-201ENST00000540906 ANKRD18BA2A2Z9 1011 aa14.93□□□□□ -0.02
AP003559.1-201ENST00000540906 PHF14O94880 888 aa14.93□□□□□ -0.02
AP003559.1-201ENST00000540906 TAF7LQ5H9L4 462 aa14.93□□□□□ -0.02
AP003559.1-201ENST00000540906 CLEC4GQ6UXB4 293 aa14.93□□□□□ -0.02
AP003559.1-201ENST00000540906 EVI5LQ96CN4 794 aa14.93□□□□□ -0.02
AP003559.1-201ENST00000540906 VGLL2Q8N8G2 317 aa14.92□□□□□ -0.02
AP003559.1-201ENST00000540906 FAM227BQ96M60 508 aa14.92□□□□□ -0.02
AP003559.1-201ENST00000540906 UBR3Q6ZT12 1888 aa14.92□□□□□ -0.02
AP003559.1-201ENST00000540906 PROM2Q8N271 834 aa14.92□□□□□ -0.02
AP003559.1-201ENST00000540906 CCDC24Q8N4L8 307 aa14.92□□□□□ -0.02
AP003559.1-201ENST00000540906 SPRYD3Q8NCJ5 442 aa14.92□□□□□ -0.02
AP003559.1-201ENST00000540906 LSG1Q9H089 658 aaKnown RBP14.92□□□□□ -0.02
AP003559.1-201ENST00000540906 CEP126Q9P2H0 1117 aa14.92□□□□□ -0.02
AP003559.1-201ENST00000540906 ZNF652Q9Y2D9 606 aa14.92□□□□□ -0.02
AP003559.1-201ENST00000540906 RTCBQ9Y3I0 505 aaKnown RBP14.92□□□□□ -0.02
AP003559.1-201ENST00000540906 NMIQ13287 307 aaPredicted RBP14.91□□□□□ -0.02
AP003559.1-201ENST00000540906 BECN1Q14457 450 aa14.91□□□□□ -0.02
AP003559.1-201ENST00000540906 LDHAL6AQ6ZMR3 332 aa14.91□□□□□ -0.02
AP003559.1-201ENST00000540906 ILDR2Q71H61 639 aa14.91□□□□□ -0.02
AP003559.1-201ENST00000540906 DNAJC2Q99543 621 aaKnown RBP14.91□□□□□ -0.02
AP003559.1-201ENST00000540906 HAUS7Q99871 368 aa14.91□□□□□ -0.02
AP003559.1-201ENST00000540906 A0A0D9SFI3 127 aa14.9□□□□□ -0.02
AP003559.1-201ENST00000540906 SNAP23O00161 211 aa14.9□□□□□ -0.02
AP003559.1-201ENST00000540906 PTH1RQ03431 593 aa14.9□□□□□ -0.02
AP003559.1-201ENST00000540906 SLFNL1Q499Z3 407 aa14.9□□□□□ -0.02
AP003559.1-201ENST00000540906 METTL24Q5JXM2 366 aa14.9□□□□□ -0.02
AP003559.1-201ENST00000540906 HELBQ8NG08 1087 aaPredicted RBP14.9□□□□□ -0.02
AP003559.1-201ENST00000540906 XAGE2Q96GT9 111 aa14.9□□□□□ -0.02
AP003559.1-201ENST00000540906 AK7Q96M32 723 aa14.9□□□□□ -0.02
AP003559.1-201ENST00000540906 FSD1Q9BTV5 496 aa14.9□□□□□ -0.02
AP003559.1-201ENST00000540906 DAXXQ9UER7 740 aaPredicted RBP14.9□□□□□ -0.02
AP003559.1-201ENST00000540906 FBXO3Q9UK99 471 aa14.9□□□□□ -0.02
AP003559.1-201ENST00000540906 SCARF1Q14162 830 aa14.89□□□□□ -0.03
AP003559.1-201ENST00000540906 DDX46Q7L014 1031 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms