RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 NACC1Q96RE7 527 aa7.71□□□□□ -1.18
PRKDC-209ENST00000540819 PHACTR1Q9C0D0 580 aa7.71□□□□□ -1.18
PRKDC-209ENST00000540819 SLAIN2Q9P270 581 aa7.71□□□□□ -1.18
PRKDC-209ENST00000540819 MKRN1Q9UHC7 482 aaKnown RBP7.71□□□□□ -1.18
PRKDC-209ENST00000540819 PPP1R12BO60237 982 aaPredicted RBP7.7□□□□□ -1.18
PRKDC-209ENST00000540819 ATP2B4P23634 1241 aa7.7□□□□□ -1.18
PRKDC-209ENST00000540819 ADH7P40394 386 aa7.7□□□□□ -1.18
PRKDC-209ENST00000540819 CLDN10P78369 228 aa7.7□□□□□ -1.18
PRKDC-209ENST00000540819 COL19A1Q14993 1142 aa7.7□□□□□ -1.18
PRKDC-209ENST00000540819 TSNAXIP1Q2TAA8 658 aa7.7□□□□□ -1.18
PRKDC-209ENST00000540819 MICALL1Q8N3F8 863 aa7.7□□□□□ -1.18
PRKDC-209ENST00000540819 PRDM6Q9NQX0 595 aa7.7□□□□□ -1.18
PRKDC-209ENST00000540819 USP17L15C9J2P7 530 aa7.69□□□□□ -1.18
PRKDC-209ENST00000540819 USP17L10C9JJH3 530 aa7.69□□□□□ -1.18
PRKDC-209ENST00000540819 USP17L13C9JLJ4 530 aa7.69□□□□□ -1.18
PRKDC-209ENST00000540819 USP17L12C9JPN9 530 aa7.69□□□□□ -1.18
PRKDC-209ENST00000540819 USP17L11C9JVI0 530 aa7.69□□□□□ -1.18
PRKDC-209ENST00000540819 USP17L21D6R901 530 aa7.69□□□□□ -1.18
PRKDC-209ENST00000540819 USP17L18D6R9N7 530 aa7.69□□□□□ -1.18
PRKDC-209ENST00000540819 USP17L22D6RA61 530 aa7.69□□□□□ -1.18
PRKDC-209ENST00000540819 USP17L17D6RBQ6 530 aa7.69□□□□□ -1.18
PRKDC-209ENST00000540819 USP17L19D6RCP7 530 aa7.69□□□□□ -1.18
PRKDC-209ENST00000540819 USP17L20D6RJB6 530 aa7.69□□□□□ -1.18
PRKDC-209ENST00000540819 M0R2N6 131 aa7.69□□□□□ -1.18
PRKDC-209ENST00000540819 FAM69CQ0P6D2 419 aa7.69□□□□□ -1.18
PRKDC-209ENST00000540819 USP17L24Q0WX57 530 aa7.69□□□□□ -1.18
PRKDC-209ENST00000540819 TRAPPC3LQ5T215 181 aa7.69□□□□□ -1.18
PRKDC-209ENST00000540819 NOL8Q76FK4 1167 aaKnown RBP7.69□□□□□ -1.18
PRKDC-209ENST00000540819 RAB44Q7Z6P3 723 aaPredicted RBP7.69□□□□□ -1.18
PRKDC-209ENST00000540819 HSH2DQ96JZ2 352 aa7.69□□□□□ -1.18
PRKDC-209ENST00000540819 MDFIQ99750 246 aa7.69□□□□□ -1.18
PRKDC-209ENST00000540819 EGFL7Q9UHF1 273 aa7.69□□□□□ -1.18
PRKDC-209ENST00000540819 KIAA1024Q9UPX6 916 aa7.69□□□□□ -1.18
PRKDC-209ENST00000540819 ALBP02768 609 aa7.68□□□□□ -1.18
PRKDC-209ENST00000540819 HIRAP54198 1017 aaPredicted RBP7.68□□□□□ -1.18
PRKDC-209ENST00000540819 KCNQ4P56696 695 aa7.68□□□□□ -1.18
PRKDC-209ENST00000540819 HIF1AQ16665 826 aa7.68□□□□□ -1.18
PRKDC-209ENST00000540819 ZMYM1Q5SVZ6 1142 aa7.68□□□□□ -1.18
PRKDC-209ENST00000540819 FAM200AQ8TCP9 573 aa7.68□□□□□ -1.18
PRKDC-209ENST00000540819 BHMTQ93088 406 aa7.68□□□□□ -1.18
PRKDC-209ENST00000540819 SUSD3Q96L08 255 aa7.68□□□□□ -1.18
PRKDC-209ENST00000540819 IGFLR1Q9H665 355 aa7.68□□□□□ -1.18
PRKDC-209ENST00000540819 TMA7Q9Y2S6 64 aaKnown RBP7.68□□□□□ -1.18
PRKDC-209ENST00000540819 STARD13Q9Y3M8 1113 aa7.68□□□□□ -1.18
PRKDC-209ENST00000540819 FAM229AH3BQW9 127 aa7.67□□□□□ -1.18
PRKDC-209ENST00000540819 SCAMP3O14828 347 aaKnown RBP7.67□□□□□ -1.18
PRKDC-209ENST00000540819 LILRB5O75023 590 aa7.67□□□□□ -1.18
PRKDC-209ENST00000540819 TAGLNQ01995 201 aaKnown RBP7.67□□□□□ -1.18
PRKDC-209ENST00000540819 TBC1D8BQ0IIM8 1120 aa7.67□□□□□ -1.18
PRKDC-209ENST00000540819 C8orf86Q6ZUL3 223 aa7.67□□□□□ -1.18
PRKDC-209ENST00000540819 FAM9AQ8IZU1 332 aaPredicted RBP7.67□□□□□ -1.18
PRKDC-209ENST00000540819 TSEN2Q8NCE0 465 aaKnown RBP7.67□□□□□ -1.18
PRKDC-209ENST00000540819 ZNF594Q96JF6 807 aaPredicted RBP7.67□□□□□ -1.18
PRKDC-209ENST00000540819 ASB16Q96NS5 453 aa7.67□□□□□ -1.18
PRKDC-209ENST00000540819 ATAD2Q6PL18 1390 aa7.67□□□□□ -1.18
PRKDC-209ENST00000540819 MARCH6O60337 910 aa7.66□□□□□ -1.18
PRKDC-209ENST00000540819 SWI5Q1ZZU3 235 aa7.66□□□□□ -1.18
PRKDC-209ENST00000540819 LARP1Q6PKG0 1096 aaKnown RBP7.66□□□□□ -1.18
PRKDC-209ENST00000540819 ALDH16A1Q8IZ83 802 aa7.66□□□□□ -1.18
PRKDC-209ENST00000540819 ZNF280CQ8ND82 737 aa7.66□□□□□ -1.18
PRKDC-209ENST00000540819 GAS2L2Q8NHY3 880 aa7.66□□□□□ -1.18
PRKDC-209ENST00000540819 CHMP7Q8WUX9 453 aaPredicted RBP7.66□□□□□ -1.18
PRKDC-209ENST00000540819 PIK3R5Q8WYR1 880 aa7.66□□□□□ -1.18
PRKDC-209ENST00000540819 UBE2OQ9C0C9 1292 aaKnown RBP7.66□□□□□ -1.18
PRKDC-209ENST00000540819 C9orf172C9J069 976 aa7.65□□□□□ -1.18
PRKDC-209ENST00000540819 RASA1P20936 1047 aa7.65□□□□□ -1.18
PRKDC-209ENST00000540819 TYRO3Q06418 890 aa7.65□□□□□ -1.18
PRKDC-209ENST00000540819 PTK7Q13308 1070 aa7.65□□□□□ -1.18
PRKDC-209ENST00000540819 GRIK4Q16099 956 aa7.65□□□□□ -1.18
PRKDC-209ENST00000540819 CRTC2Q53ET0 693 aaPredicted RBP7.65□□□□□ -1.18
PRKDC-209ENST00000540819 ZNF662Q6ZS27 426 aa7.65□□□□□ -1.18
PRKDC-209ENST00000540819 ZSCAN29Q8IWY8 852 aaPredicted RBP7.65□□□□□ -1.18
PRKDC-209ENST00000540819 PSMD1Q99460 953 aa7.65□□□□□ -1.18
PRKDC-209ENST00000540819 TANGO6Q9C0B7 1094 aa7.65□□□□□ -1.18
PRKDC-209ENST00000540819 EFCC1Q9HA90 598 aa7.65□□□□□ -1.18
PRKDC-209ENST00000540819 TPSG1Q9NRR2 321 aa7.65□□□□□ -1.18
PRKDC-209ENST00000540819 HDLBPQ00341 1268 aaKnown RBP7.64□□□□□ -1.19
PRKDC-209ENST00000540819 COL9A3Q14050 684 aaPredicted RBP7.64□□□□□ -1.19
PRKDC-209ENST00000540819 RSPO4Q2I0M5 234 aaPredicted RBP7.64□□□□□ -1.19
PRKDC-209ENST00000540819 BTLAQ7Z6A9 289 aa7.64□□□□□ -1.19
PRKDC-209ENST00000540819 SIX5Q8N196 739 aa7.64□□□□□ -1.19
PRKDC-209ENST00000540819 SCG3Q8WXD2 468 aaKnown RBP7.64□□□□□ -1.19
PRKDC-209ENST00000540819 NGLY1Q96IV0 654 aa7.64□□□□□ -1.19
PRKDC-209ENST00000540819 PNMA5Q96PV4 448 aa7.64□□□□□ -1.19
PRKDC-209ENST00000540819 BACH2Q9BYV9 841 aa7.64□□□□□ -1.19
PRKDC-209ENST00000540819 LNPKQ9C0E8 428 aa7.64□□□□□ -1.19
PRKDC-209ENST00000540819 SCO2A0A1W2PP80 73 aa7.63□□□□□ -1.19
PRKDC-209ENST00000540819 TLDC2A0PJX2 215 aa7.63□□□□□ -1.19
PRKDC-209ENST00000540819 NID1P14543 1247 aa7.63□□□□□ -1.19
PRKDC-209ENST00000540819 MAPK1P28482 360 aa7.63□□□□□ -1.19
PRKDC-209ENST00000540819 SEC13P55735 322 aa7.63□□□□□ -1.19
PRKDC-209ENST00000540819 RAC1P63000 192 aa7.63□□□□□ -1.19
PRKDC-209ENST00000540819 MRPL58Q14197 206 aaKnown RBP7.63□□□□□ -1.19
PRKDC-209ENST00000540819 POTEAQ6S8J7 498 aa7.63□□□□□ -1.19
PRKDC-209ENST00000540819 C20orf204Q6ZNR8 217 aa7.63□□□□□ -1.19
PRKDC-209ENST00000540819 STAG2Q8N3U4 1231 aa7.63□□□□□ -1.19
PRKDC-209ENST00000540819 HINFPQ9BQA5 517 aa7.63□□□□□ -1.19
PRKDC-209ENST00000540819 DCTN4Q9UJW0 460 aa7.63□□□□□ -1.19
PRKDC-209ENST00000540819 ITGB7P26010 798 aa7.62□□□□□ -1.19
PRKDC-209ENST00000540819 EAPPQ56P03 285 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms