RNA–Protein interactions for RNA: ENST00000540503.1

PPFIBP1-212, Transcript of PPFIA binding protein 1, humanhuman

TSL 4

Gene PPFIBP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-212ENST00000540503 SF3B3Q15393 1217 aaKnown RBP12.85□□□□□ -0.35
PPFIBP1-212ENST00000540503 LMBR1LQ6UX01 489 aa12.85□□□□□ -0.35
PPFIBP1-212ENST00000540503 CCDC24Q8N4L8 307 aa12.85□□□□□ -0.35
PPFIBP1-212ENST00000540503 ANKRD44Q8N8A2 993 aa12.85□□□□□ -0.35
PPFIBP1-212ENST00000540503 SPEF2Q9C093 1822 aa12.84□□□□□ -0.35
PPFIBP1-212ENST00000540503 ANKRD18BA2A2Z9 1011 aa12.84□□□□□ -0.35
PPFIBP1-212ENST00000540503 SRGAP3O43295 1099 aa12.84□□□□□ -0.35
PPFIBP1-212ENST00000540503 CSF1RP07333 972 aa12.84□□□□□ -0.35
PPFIBP1-212ENST00000540503 PTGER2P43116 358 aa12.84□□□□□ -0.35
PPFIBP1-212ENST00000540503 IFIT5Q13325 482 aaKnown RBP12.84□□□□□ -0.35
PPFIBP1-212ENST00000540503 CCDC57Q2TAC2 916 aa12.84□□□□□ -0.35
PPFIBP1-212ENST00000540503 FAM161AQ3B820 660 aa12.84□□□□□ -0.35
PPFIBP1-212ENST00000540503 TAF7LQ5H9L4 462 aa12.84□□□□□ -0.35
PPFIBP1-212ENST00000540503 EPHA10Q5JZY3 1008 aa12.84□□□□□ -0.35
PPFIBP1-212ENST00000540503 DDX46Q7L014 1031 aaKnown RBP12.84□□□□□ -0.35
PPFIBP1-212ENST00000540503 TTLL11Q8NHH1 800 aa12.84□□□□□ -0.35
PPFIBP1-212ENST00000540503 RBM17Q96I25 401 aaKnown RBP12.84□□□□□ -0.35
PPFIBP1-212ENST00000540503 KAZALD1Q96I82 304 aa12.84□□□□□ -0.35
PPFIBP1-212ENST00000540503 CDC5LQ99459 802 aaKnown RBP12.84□□□□□ -0.35
PPFIBP1-212ENST00000540503 PPP1R1BQ9UD71 204 aaPredicted RBP12.84□□□□□ -0.35
PPFIBP1-212ENST00000540503 CACNA1SQ13698 1873 aa12.83□□□□□ -0.36
PPFIBP1-212ENST00000540503 KLRG2A4D1S0 409 aaPredicted RBP12.83□□□□□ -0.36
PPFIBP1-212ENST00000540503 H0YIN7 160 aa12.83□□□□□ -0.36
PPFIBP1-212ENST00000540503 ATP8B2P98198 1209 aa12.83□□□□□ -0.36
PPFIBP1-212ENST00000540503 CRY2Q49AN0 593 aa12.83□□□□□ -0.36
PPFIBP1-212ENST00000540503 C2CD5Q86YS7 1000 aa12.83□□□□□ -0.36
PPFIBP1-212ENST00000540503 GREM2Q9H772 168 aa12.83□□□□□ -0.36
PPFIBP1-212ENST00000540503 CD2APQ9Y5K6 639 aa12.83□□□□□ -0.36
PPFIBP1-212ENST00000540503 KIAA1551Q9HCM1 1747 aa12.82□□□□□ -0.36
PPFIBP1-212ENST00000540503 NPR1P16066 1061 aa12.82□□□□□ -0.36
PPFIBP1-212ENST00000540503 ITGA6P23229 1130 aa12.82□□□□□ -0.36
PPFIBP1-212ENST00000540503 IGHMBP2P38935 993 aaKnown RBP12.82□□□□□ -0.36
PPFIBP1-212ENST00000540503 KLHL34Q8N239 644 aa12.82□□□□□ -0.36
PPFIBP1-212ENST00000540503 MASTLQ96GX5 879 aa12.82□□□□□ -0.36
PPFIBP1-212ENST00000540503 CCDC85AQ96PX6 553 aaPredicted RBP12.82□□□□□ -0.36
PPFIBP1-212ENST00000540503 RWDD1Q9H446 243 aaPredicted RBP12.82□□□□□ -0.36
PPFIBP1-212ENST00000540503 TGFB2P61812 414 aa12.81□□□□□ -0.36
PPFIBP1-212ENST00000540503 GRAPQ13588 217 aa12.81□□□□□ -0.36
PPFIBP1-212ENST00000540503 POLA2Q14181 598 aa12.81□□□□□ -0.36
PPFIBP1-212ENST00000540503 STYK1Q6J9G0 422 aa12.81□□□□□ -0.36
PPFIBP1-212ENST00000540503 C3orf67Q6ZVT6 689 aa12.81□□□□□ -0.36
PPFIBP1-212ENST00000540503 ANKRD18AQ8IVF6 992 aa12.81□□□□□ -0.36
PPFIBP1-212ENST00000540503 GRAPLQ8TC17 118 aaPredicted RBP12.81□□□□□ -0.36
PPFIBP1-212ENST00000540503 SSH3Q8TE77 659 aa12.81□□□□□ -0.36
PPFIBP1-212ENST00000540503 PCDHB15Q9Y5E8 787 aa12.81□□□□□ -0.36
PPFIBP1-212ENST00000540503 PNMA6EA0A0J9YXQ4 647 aa12.8□□□□□ -0.36
PPFIBP1-212ENST00000540503 SRGNP10124 158 aa12.8□□□□□ -0.36
PPFIBP1-212ENST00000540503 ALDH1B1P30837 517 aa12.8□□□□□ -0.36
PPFIBP1-212ENST00000540503 HOXA10P31260 410 aaPredicted RBP12.8□□□□□ -0.36
PPFIBP1-212ENST00000540503 HDAC1Q13547 482 aaPredicted RBP12.8□□□□□ -0.36
PPFIBP1-212ENST00000540503 HSP90AB4PQ58FF6 505 aa12.8□□□□□ -0.36
PPFIBP1-212ENST00000540503 TMC4Q7Z404 712 aa12.8□□□□□ -0.36
PPFIBP1-212ENST00000540503 CNKSR1Q969H4 720 aa12.8□□□□□ -0.36
PPFIBP1-212ENST00000540503 CRAMP1Q96RY5 1269 aa12.8□□□□□ -0.36
PPFIBP1-212ENST00000540503 MPHOSPH8Q99549 860 aa12.8□□□□□ -0.36
PPFIBP1-212ENST00000540503 PPP4R2Q9NY27 417 aa12.8□□□□□ -0.36
PPFIBP1-212ENST00000540503 FBXO3Q9UK99 471 aa12.8□□□□□ -0.36
PPFIBP1-212ENST00000540503 BRCA1P38398 1863 aaKnown RBP12.8□□□□□ -0.36
PPFIBP1-212ENST00000540503 LRRC37AA6NMS7 1700 aa12.79□□□□□ -0.36
PPFIBP1-212ENST00000540503 TAF1P21675 1872 aa12.79□□□□□ -0.36
PPFIBP1-212ENST00000540503 OS9Q13438 667 aaPredicted RBP12.79□□□□□ -0.36
PPFIBP1-212ENST00000540503 ZNF622Q969S3 477 aaKnown RBP eCLIP12.79□□□□□ -0.36
PPFIBP1-212ENST00000540503 CCDC136Q96JN2 1154 aa12.79□□□□□ -0.36
PPFIBP1-212ENST00000540503 COPRSQ9NQ92 184 aa12.79□□□□□ -0.36
PPFIBP1-212ENST00000540503 A0A1B0GUL6 1792 aa12.79□□□□□ -0.36
PPFIBP1-212ENST00000540503 RFX5P48382 616 aaPredicted RBP12.78□□□□□ -0.36
PPFIBP1-212ENST00000540503 PTPN12Q05209 780 aaKnown RBP12.78□□□□□ -0.36
PPFIBP1-212ENST00000540503 G3BP1Q13283 466 aaKnown RBP eCLIP12.78□□□□□ -0.36
PPFIBP1-212ENST00000540503 ERC1Q8IUD2 1116 aa12.78□□□□□ -0.36
PPFIBP1-212ENST00000540503 SIRT2Q8IXJ6 389 aa12.78□□□□□ -0.36
PPFIBP1-212ENST00000540503 GCC1Q96CN9 775 aa12.78□□□□□ -0.36
PPFIBP1-212ENST00000540503 TMX4Q9H1E5 349 aaPredicted RBP12.78□□□□□ -0.36
PPFIBP1-212ENST00000540503 SEC31BQ9NQW1 1179 aa12.78□□□□□ -0.36
PPFIBP1-212ENST00000540503 CNNM1Q9NRU3 951 aa12.78□□□□□ -0.36
PPFIBP1-212ENST00000540503 EYA2O00167 538 aa12.77□□□□□ -0.37
PPFIBP1-212ENST00000540503 PPEF1O14829 653 aaPredicted RBP12.77□□□□□ -0.37
PPFIBP1-212ENST00000540503 SURF6O75683 361 aaKnown RBP12.77□□□□□ -0.37
PPFIBP1-212ENST00000540503 BBOX1O75936 387 aa12.77□□□□□ -0.37
PPFIBP1-212ENST00000540503 CIAO1O76071 339 aa12.77□□□□□ -0.37
PPFIBP1-212ENST00000540503 DPEP1P16444 411 aa12.77□□□□□ -0.37
PPFIBP1-212ENST00000540503 CHRNA5P30532 468 aa12.77□□□□□ -0.37
PPFIBP1-212ENST00000540503 RPS8P62241 208 aaKnown RBP12.77□□□□□ -0.37
PPFIBP1-212ENST00000540503 LDHAL6AQ6ZMR3 332 aa12.77□□□□□ -0.37
PPFIBP1-212ENST00000540503 ZBTB47Q9UFB7 747 aaPredicted RBP12.77□□□□□ -0.37
PPFIBP1-212ENST00000540503 NOP58Q9Y2X3 529 aaKnown RBP12.77□□□□□ -0.37
PPFIBP1-212ENST00000540503 RAB11FIP3O75154 756 aa12.76□□□□□ -0.37
PPFIBP1-212ENST00000540503 IL15P40933 162 aaPredicted RBP12.76□□□□□ -0.37
PPFIBP1-212ENST00000540503 TTLL6Q8N841 843 aa12.76□□□□□ -0.37
PPFIBP1-212ENST00000540503 CELF1Q92879 486 aaKnown RBP12.76□□□□□ -0.37
PPFIBP1-212ENST00000540503 ZNF594Q96JF6 807 aaPredicted RBP12.76□□□□□ -0.37
PPFIBP1-212ENST00000540503 SIL1Q9H173 461 aa12.76□□□□□ -0.37
PPFIBP1-212ENST00000540503 BSDC1Q9NW68 430 aaPredicted RBP12.76□□□□□ -0.37
PPFIBP1-212ENST00000540503 PIM2Q9P1W9 311 aa12.76□□□□□ -0.37
PPFIBP1-212ENST00000540503 PA2G4Q9UQ80 394 aaKnown RBP12.76□□□□□ -0.37
PPFIBP1-212ENST00000540503 MROH5Q6ZUA9 1318 aa12.76□□□□□ -0.37
PPFIBP1-212ENST00000540503 ARFGEF1Q9Y6D6 1849 aa12.76□□□□□ -0.37
PPFIBP1-212ENST00000540503 SOGA3Q5TF21 947 aa12.75□□□□□ -0.37
PPFIBP1-212ENST00000540503 PRPF40BQ6NWY9 871 aaKnown RBP12.75□□□□□ -0.37
PPFIBP1-212ENST00000540503 CENPQQ7L2Z9 268 aaPredicted RBP12.75□□□□□ -0.37
PPFIBP1-212ENST00000540503 SLX4Q8IY92 1834 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms