RNA–Protein interactions for RNA: ENST00000540251.5

NEK2-205, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-205ENST00000540251 MTX1Q13505 466 aa23.1■■□□□ 1.29
NEK2-205ENST00000540251 EPHA10Q5JZY3 1008 aa23.1■■□□□ 1.29
NEK2-205ENST00000540251 GNAI2P04899 355 aa23.09■■□□□ 1.29
NEK2-205ENST00000540251 STYK1Q6J9G0 422 aa23.09■■□□□ 1.29
NEK2-205ENST00000540251 CRAMP1Q96RY5 1269 aa23.09■■□□□ 1.29
NEK2-205ENST00000540251 FHDC1Q9C0D6 1143 aaPredicted RBP23.09■■□□□ 1.29
NEK2-205ENST00000540251 TAF1P21675 1872 aa23.09■■□□□ 1.29
NEK2-205ENST00000540251 H0YIN7 160 aa23.08■■□□□ 1.29
NEK2-205ENST00000540251 NPR1P16066 1061 aa23.08■■□□□ 1.29
NEK2-205ENST00000540251 CCDC152Q4G0S7 254 aa23.08■■□□□ 1.29
NEK2-205ENST00000540251 ANKRD44Q8N8A2 993 aa23.08■■□□□ 1.29
NEK2-205ENST00000540251 MASTLQ96GX5 879 aa23.08■■□□□ 1.29
NEK2-205ENST00000540251 SYT17Q9BSW7 474 aa23.08■■□□□ 1.28
NEK2-205ENST00000540251 BICC1Q9H694 974 aaKnown RBP23.08■■□□□ 1.28
NEK2-205ENST00000540251 PPP1R1BQ9UD71 204 aaPredicted RBP23.08■■□□□ 1.28
NEK2-205ENST00000540251 LRRFIP2Q9Y608 721 aaKnown RBP23.08■■□□□ 1.28
NEK2-205ENST00000540251 C2CD5Q86YS7 1000 aa23.07■■□□□ 1.28
NEK2-205ENST00000540251 ARFGEF1Q9Y6D6 1849 aa23.06■■□□□ 1.28
NEK2-205ENST00000540251 DPEP1P16444 411 aa23.06■■□□□ 1.28
NEK2-205ENST00000540251 LMBR1LQ6UX01 489 aa23.06■■□□□ 1.28
NEK2-205ENST00000540251 CRBNQ96SW2 442 aa23.06■■□□□ 1.28
NEK2-205ENST00000540251 ALDH1B1P30837 517 aa23.05■■□□□ 1.28
NEK2-205ENST00000540251 SLX4Q8IY92 1834 aa23.05■■□□□ 1.28
NEK2-205ENST00000540251 CACNA1SQ13698 1873 aa23.04■■□□□ 1.28
NEK2-205ENST00000540251 CHRNA5P30532 468 aa23.04■■□□□ 1.28
NEK2-205ENST00000540251 RPGRQ92834 1020 aaKnown RBP23.04■■□□□ 1.28
NEK2-205ENST00000540251 CNKSR1Q969H4 720 aa23.04■■□□□ 1.28
NEK2-205ENST00000540251 RBM17Q96I25 401 aaKnown RBP23.04■■□□□ 1.28
NEK2-205ENST00000540251 A0A0G2JLW4 131 aa23.03■■□□□ 1.28
NEK2-205ENST00000540251 ATP8B2P98198 1209 aa23.03■■□□□ 1.28
NEK2-205ENST00000540251 DDX46Q7L014 1031 aaKnown RBP23.03■■□□□ 1.28
NEK2-205ENST00000540251 RPAP2Q8IXW5 612 aaPredicted RBP23.03■■□□□ 1.28
NEK2-205ENST00000540251 GREM2Q9H772 168 aa23.03■■□□□ 1.28
NEK2-205ENST00000540251 BBOX1O75936 387 aa23.02■■□□□ 1.28
NEK2-205ENST00000540251 NLGN2Q8NFZ4 835 aa23.02■■□□□ 1.28
NEK2-205ENST00000540251 PIM2Q9P1W9 311 aa23.02■■□□□ 1.28
NEK2-205ENST00000540251 LRRC37AA6NMS7 1700 aa23.02■■□□□ 1.27
NEK2-205ENST00000540251 SRCAPQ6ZRS2 3230 aa23.01■■□□□ 1.27
NEK2-205ENST00000540251 ITGA6P23229 1130 aa23.01■■□□□ 1.27
NEK2-205ENST00000540251 RFX5P48382 616 aaPredicted RBP23.01■■□□□ 1.27
NEK2-205ENST00000540251 GRAPQ13588 217 aa23.01■■□□□ 1.27
NEK2-205ENST00000540251 TMC4Q7Z404 712 aa23.01■■□□□ 1.27
NEK2-205ENST00000540251 GRAPLQ8TC17 118 aaPredicted RBP23.01■■□□□ 1.27
NEK2-205ENST00000540251 COL4A1P02462 1669 aa23.01■■□□□ 1.27
NEK2-205ENST00000540251 IFIT5Q13325 482 aaKnown RBP23■■□□□ 1.27
NEK2-205ENST00000540251 POLA2Q14181 598 aa23■■□□□ 1.27
NEK2-205ENST00000540251 FAM161AQ3B820 660 aa23■■□□□ 1.27
NEK2-205ENST00000540251 CEP85Q6P2H3 762 aa23■■□□□ 1.27
NEK2-205ENST00000540251 TTLL6Q8N841 843 aa23■■□□□ 1.27
NEK2-205ENST00000540251 SSH3Q8TE77 659 aa23■■□□□ 1.27
NEK2-205ENST00000540251 CDC5LQ99459 802 aaKnown RBP23■■□□□ 1.27
NEK2-205ENST00000540251 SEC31BQ9NQW1 1179 aa23■■□□□ 1.27
NEK2-205ENST00000540251 ANKRD18BA2A2Z9 1011 aa22.99■■□□□ 1.27
NEK2-205ENST00000540251 RPS8P62241 208 aaKnown RBP22.99■■□□□ 1.27
NEK2-205ENST00000540251 CCDC57Q2TAC2 916 aa22.99■■□□□ 1.27
NEK2-205ENST00000540251 C7orf43Q8WVR3 580 aa22.99■■□□□ 1.27
NEK2-205ENST00000540251 FBXO3Q9UK99 471 aa22.99■■□□□ 1.27
NEK2-205ENST00000540251 SPEF2Q9C093 1822 aa22.98■■□□□ 1.27
NEK2-205ENST00000540251 EXOC6Q8TAG9 804 aa22.98■■□□□ 1.27
NEK2-205ENST00000540251 ZNF622Q969S3 477 aaKnown RBP eCLIP22.98■■□□□ 1.272e-7■□□□□ 9.6
NEK2-205ENST00000540251 COPRSQ9NQ92 184 aa22.98■■□□□ 1.27
NEK2-205ENST00000540251 CELF1Q92879 486 aaKnown RBP22.97■■□□□ 1.27
NEK2-205ENST00000540251 C1orf115Q9H7X2 142 aa22.97■■□□□ 1.27
NEK2-205ENST00000540251 BSDC1Q9NW68 430 aaPredicted RBP22.97■■□□□ 1.27
NEK2-205ENST00000540251 A0A1B0GUL6 1792 aa22.96■■□□□ 1.27
NEK2-205ENST00000540251 PNMA6EA0A0J9YXQ4 647 aa22.96■■□□□ 1.27
NEK2-205ENST00000540251 PTPN12Q05209 780 aaKnown RBP22.96■■□□□ 1.27
NEK2-205ENST00000540251 ANKRD18AQ8IVF6 992 aa22.96■■□□□ 1.27
NEK2-205ENST00000540251 SIRT2Q8IXJ6 389 aa22.96■■□□□ 1.27
NEK2-205ENST00000540251 KLHL34Q8N239 644 aa22.96■■□□□ 1.27
NEK2-205ENST00000540251 SNED1Q8TER0 1413 aa22.95■■□□□ 1.27
NEK2-205ENST00000540251 SRGAP3O43295 1099 aa22.95■■□□□ 1.26
NEK2-205ENST00000540251 DALRD3Q5D0E6 543 aaKnown RBP22.95■■□□□ 1.26
NEK2-205ENST00000540251 CC2D2BQ6DHV5 1058 aa22.95■■□□□ 1.26
NEK2-205ENST00000540251 PRPF40BQ6NWY9 871 aaKnown RBP22.95■■□□□ 1.26
NEK2-205ENST00000540251 SP8Q8IXZ3 490 aa22.95■■□□□ 1.26
NEK2-205ENST00000540251 CCDC85AQ96PX6 553 aaPredicted RBP22.95■■□□□ 1.26
NEK2-205ENST00000540251 FER1L6Q2WGJ9 1857 aa22.95■■□□□ 1.26
NEK2-205ENST00000540251 LTBP1Q14766 1721 aa22.94■■□□□ 1.26
NEK2-205ENST00000540251 GRIPAP1Q4V328 841 aa22.94■■□□□ 1.26
NEK2-205ENST00000540251 ATP6V0A2Q9Y487 856 aa22.94■■□□□ 1.26
NEK2-205ENST00000540251 PCDHB15Q9Y5E8 787 aa22.94■■□□□ 1.26
NEK2-205ENST00000540251 IGHMBP2P38935 993 aaKnown RBP22.93■■□□□ 1.26
NEK2-205ENST00000540251 NOP58Q9Y2X3 529 aaKnown RBP22.93■■□□□ 1.26
NEK2-205ENST00000540251 CHMP3Q9Y3E7 222 aa22.93■■□□□ 1.26
NEK2-205ENST00000540251 CIAO1O76071 339 aa22.92■■□□□ 1.26
NEK2-205ENST00000540251 ERICH6BQ5W0A0 696 aa22.92■■□□□ 1.26
NEK2-205ENST00000540251 PPEF1O14829 653 aaPredicted RBP22.91■■□□□ 1.26
NEK2-205ENST00000540251 HMMRO75330 724 aa22.91■■□□□ 1.26
NEK2-205ENST00000540251 SOGA3Q5TF21 947 aa22.91■■□□□ 1.26
NEK2-205ENST00000540251 RIPOR2Q9Y4F9 1068 aa22.91■■□□□ 1.26
NEK2-205ENST00000540251 IRX6P78412 446 aaPredicted RBP22.9■■□□□ 1.26
NEK2-205ENST00000540251 LDHAL6AQ6ZMR3 332 aa22.9■■□□□ 1.26
NEK2-205ENST00000540251 MPHOSPH8Q99549 860 aa22.9■■□□□ 1.26
NEK2-205ENST00000540251 EYA2O00167 538 aa22.89■■□□□ 1.26
NEK2-205ENST00000540251 HDAC1Q13547 482 aaPredicted RBP22.89■■□□□ 1.26
NEK2-205ENST00000540251 ZNF594Q96JF6 807 aaPredicted RBP22.89■■□□□ 1.26
NEK2-205ENST00000540251 PODXL2Q9NZ53 605 aa22.89■■□□□ 1.26
NEK2-205ENST00000540251 MINPP1Q9UNW1 487 aa22.89■■□□□ 1.26
NEK2-205ENST00000540251 ATG9AQ7Z3C6 839 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms