RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 SVOPQ8N4V2 548 aa6.15□□□□□ -1.42
C2CD3-214ENST00000540057 CHIC2Q9UKJ5 165 aa6.15□□□□□ -1.42
C2CD3-214ENST00000540057 ANKRD30AQ9BXX3 1397 aa6.15□□□□□ -1.43
C2CD3-214ENST00000540057 CAMTA1Q9Y6Y1 1673 aa6.14□□□□□ -1.43
C2CD3-214ENST00000540057 TNS1Q9HBL0 1735 aaKnown RBP6.14□□□□□ -1.43
C2CD3-214ENST00000540057 GPR25O00155 361 aa6.14□□□□□ -1.43
C2CD3-214ENST00000540057 GNRH1P01148 92 aa6.14□□□□□ -1.43
C2CD3-214ENST00000540057 C1QTNF8P60827 252 aa6.14□□□□□ -1.43
C2CD3-214ENST00000540057 XPCQ01831 940 aaPredicted RBP6.14□□□□□ -1.43
C2CD3-214ENST00000540057 SRSF11Q05519 484 aaKnown RBP6.14□□□□□ -1.43
C2CD3-214ENST00000540057 WDR44Q5JSH3 913 aa6.14□□□□□ -1.43
C2CD3-214ENST00000540057 SLC27A3Q5K4L6 730 aa6.14□□□□□ -1.43
C2CD3-214ENST00000540057 KANK4Q5T7N3 995 aaPredicted RBP6.14□□□□□ -1.43
C2CD3-214ENST00000540057 LYPD4Q6UWN0 246 aa6.14□□□□□ -1.43
C2CD3-214ENST00000540057 GMCL1Q96IK5 515 aa6.14□□□□□ -1.43
C2CD3-214ENST00000540057 ESYT1Q9BSJ8 1104 aa6.14□□□□□ -1.43
C2CD3-214ENST00000540057 FHDC1Q9C0D6 1143 aaPredicted RBP6.14□□□□□ -1.43
C2CD3-214ENST00000540057 NPHP3Q7Z494 1330 aa6.14□□□□□ -1.43
C2CD3-214ENST00000540057 DISP2A7MBM2 1401 aa6.14□□□□□ -1.43
C2CD3-214ENST00000540057 USP32Q8NFA0 1604 aa6.14□□□□□ -1.43
C2CD3-214ENST00000540057 E9PCH4 1651 aa6.14□□□□□ -1.43
C2CD3-214ENST00000540057 WASLO00401 505 aaPredicted RBP6.13□□□□□ -1.43
C2CD3-214ENST00000540057 FOXO3O43524 673 aa6.13□□□□□ -1.43
C2CD3-214ENST00000540057 STAU1O95793 577 aaKnown RBP6.13□□□□□ -1.43
C2CD3-214ENST00000540057 VAC14Q08AM6 782 aa6.13□□□□□ -1.43
C2CD3-214ENST00000540057 MCM6Q14566 821 aa6.13□□□□□ -1.43
C2CD3-214ENST00000540057 FAM182BQ5T319 152 aa6.13□□□□□ -1.43
C2CD3-214ENST00000540057 TAS1R3Q7RTX0 852 aa6.13□□□□□ -1.43
C2CD3-214ENST00000540057 CNKSR1Q969H4 720 aa6.13□□□□□ -1.43
C2CD3-214ENST00000540057 XAGE2Q96GT9 111 aa6.13□□□□□ -1.43
C2CD3-214ENST00000540057 GDPD2Q9HCC8 539 aa6.13□□□□□ -1.43
C2CD3-214ENST00000540057 CCDC9Q9Y3X0 531 aaKnown RBP6.13□□□□□ -1.43
C2CD3-214ENST00000540057 ADGRL2O95490 1459 aa6.13□□□□□ -1.43
C2CD3-214ENST00000540057 IQGAP3Q86VI3 1631 aa6.13□□□□□ -1.43
C2CD3-214ENST00000540057 PLCH1Q4KWH8 1693 aa6.13□□□□□ -1.43
C2CD3-214ENST00000540057 NWD2Q9ULI1 1742 aa6.13□□□□□ -1.43
C2CD3-214ENST00000540057 EIF4G2P78344 907 aaKnown RBP eCLIP6.12□□□□□ -1.43
C2CD3-214ENST00000540057 CENPCQ03188 943 aa6.12□□□□□ -1.43
C2CD3-214ENST00000540057 ESCO1Q5FWF5 840 aa6.12□□□□□ -1.43
C2CD3-214ENST00000540057 RIPOR1Q6ZS17 1223 aa6.12□□□□□ -1.43
C2CD3-214ENST00000540057 GTPBP3Q969Y2 492 aaKnown RBP6.12□□□□□ -1.43
C2CD3-214ENST00000540057 CAMKK2Q96RR4 588 aa6.12□□□□□ -1.43
C2CD3-214ENST00000540057 GAS2L1Q99501 681 aaPredicted RBP6.12□□□□□ -1.43
C2CD3-214ENST00000540057 ROBO2Q9HCK4 1378 aa6.12□□□□□ -1.43
C2CD3-214ENST00000540057 MBIPQ9NS73 344 aa6.12□□□□□ -1.43
C2CD3-214ENST00000540057 DOLKQ9UPQ8 538 aa6.12□□□□□ -1.43
C2CD3-214ENST00000540057 NINLQ9Y2I6 1382 aa6.12□□□□□ -1.43
C2CD3-214ENST00000540057 SPATA31A3Q5VYP0 1347 aa6.11□□□□□ -1.43
C2CD3-214ENST00000540057 MYCP01106 439 aaPredicted RBP6.11□□□□□ -1.43
C2CD3-214ENST00000540057 CELA2BP08218 269 aaPredicted RBP6.11□□□□□ -1.43
C2CD3-214ENST00000540057 RNF135Q8IUD6 432 aa6.11□□□□□ -1.43
C2CD3-214ENST00000540057 TIMMDC1Q9NPL8 285 aa6.11□□□□□ -1.43
C2CD3-214ENST00000540057 PPP1R1BQ9UD71 204 aaPredicted RBP6.11□□□□□ -1.43
C2CD3-214ENST00000540057 RREB1Q92766 1687 aa6.1□□□□□ -1.43
C2CD3-214ENST00000540057 ANKRD50Q9ULJ7 1429 aa6.1□□□□□ -1.43
C2CD3-214ENST00000540057 KCNQ2O43526 872 aa6.1□□□□□ -1.43
C2CD3-214ENST00000540057 PRKCSHP14314 528 aaPredicted RBP6.1□□□□□ -1.43
C2CD3-214ENST00000540057 ABL2P42684 1182 aa6.1□□□□□ -1.43
C2CD3-214ENST00000540057 RASSF7Q02833 373 aa6.1□□□□□ -1.43
C2CD3-214ENST00000540057 ETNK1Q9HBU6 452 aa6.1□□□□□ -1.43
C2CD3-214ENST00000540057 SPON1Q9HCB6 807 aa6.1□□□□□ -1.43
C2CD3-214ENST00000540057 NUP188Q5SRE5 1749 aa6.1□□□□□ -1.43
C2CD3-214ENST00000540057 CHD4Q14839 1912 aa6.09□□□□□ -1.43
C2CD3-214ENST00000540057 LRPPRCP42704 1394 aaKnown RBP6.09□□□□□ -1.43
C2CD3-214ENST00000540057 NRAPQ86VF7 1730 aa6.09□□□□□ -1.43
C2CD3-214ENST00000540057 H7C1W4 665 aa6.09□□□□□ -1.43
C2CD3-214ENST00000540057 RNF225M0QZC1 329 aaPredicted RBP6.09□□□□□ -1.43
C2CD3-214ENST00000540057 F11P03951 625 aa6.09□□□□□ -1.43
C2CD3-214ENST00000540057 SCNN1DP51172 638 aa6.09□□□□□ -1.43
C2CD3-214ENST00000540057 UBAP2LQ14157 1087 aaKnown RBP6.09□□□□□ -1.43
C2CD3-214ENST00000540057 SLFNL1Q499Z3 407 aa6.09□□□□□ -1.43
C2CD3-214ENST00000540057 C4orf17Q53FE4 359 aa6.09□□□□□ -1.43
C2CD3-214ENST00000540057 OXLD1Q5BKU9 147 aa6.09□□□□□ -1.43
C2CD3-214ENST00000540057 ZNF326Q5BKZ1 582 aaKnown RBP6.09□□□□□ -1.43
C2CD3-214ENST00000540057 ZSCAN10Q96SZ4 725 aaPredicted RBP6.09□□□□□ -1.43
C2CD3-214ENST00000540057 NUCKS1Q9H1E3 243 aaKnown RBP6.09□□□□□ -1.43
C2CD3-214ENST00000540057 PRM3Q9NNZ6 103 aa6.09□□□□□ -1.43
C2CD3-214ENST00000540057 ADGRB2O60241 1585 aa6.09□□□□□ -1.43
C2CD3-214ENST00000540057 CDC42BPGQ6DT37 1551 aa6.09□□□□□ -1.43
C2CD3-214ENST00000540057 NEXMIFQ5QGS0 1516 aa6.09□□□□□ -1.44
C2CD3-214ENST00000540057 PRAG1Q86YV5 1406 aa6.08□□□□□ -1.44
C2CD3-214ENST00000540057 ABCA3Q99758 1704 aa6.08□□□□□ -1.44
C2CD3-214ENST00000540057 PARD3Q8TEW0 1356 aa6.08□□□□□ -1.44
C2CD3-214ENST00000540057 FAM83GA6ND36 823 aa6.08□□□□□ -1.44
C2CD3-214ENST00000540057 TRIM37O94972 964 aa6.08□□□□□ -1.44
C2CD3-214ENST00000540057 APBA3O96018 575 aa6.08□□□□□ -1.44
C2CD3-214ENST00000540057 PHKA2P46019 1235 aa6.08□□□□□ -1.44
C2CD3-214ENST00000540057 KCTD17Q8N5Z5 321 aa6.08□□□□□ -1.44
C2CD3-214ENST00000540057 ACDQ96AP0 544 aa6.08□□□□□ -1.44
C2CD3-214ENST00000540057 GPAMQ9HCL2 828 aa6.08□□□□□ -1.44
C2CD3-214ENST00000540057 HFM1A2PYH4 1435 aa6.08□□□□□ -1.44
C2CD3-214ENST00000540057 THSD7AQ9UPZ6 1657 aa6.07□□□□□ -1.44
C2CD3-214ENST00000540057 A0A1B0GTH6 734 aa6.07□□□□□ -1.44
C2CD3-214ENST00000540057 GDF11O95390 407 aa6.07□□□□□ -1.44
C2CD3-214ENST00000540057 USP4Q13107 963 aa6.07□□□□□ -1.44
C2CD3-214ENST00000540057 NBPF8Q3BBV2 869 aa6.07□□□□□ -1.44
C2CD3-214ENST00000540057 FOXR1Q6PIV2 292 aa6.07□□□□□ -1.44
C2CD3-214ENST00000540057 KRT28Q7Z3Y7 464 aa6.07□□□□□ -1.44
C2CD3-214ENST00000540057 TMEM151AQ8N4L1 468 aa6.07□□□□□ -1.44
C2CD3-214ENST00000540057 PLPP7Q8NBV4 271 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms