RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 TAF5LO75529 589 aa16.79■□□□□ 0.28
UBE3B-210ENST00000539599 KCNB2Q92953 911 aa16.79■□□□□ 0.28
UBE3B-210ENST00000539599 A1BGP04217 495 aa16.78■□□□□ 0.28
UBE3B-210ENST00000539599 SNRPA1P09661 255 aaKnown RBP16.78■□□□□ 0.28
UBE3B-210ENST00000539599 TIMM10P62072 90 aa16.78■□□□□ 0.28
UBE3B-210ENST00000539599 TMEM87AQ8NBN3 555 aa16.78■□□□□ 0.28
UBE3B-210ENST00000539599 NEUROD6Q96NK8 337 aa16.78■□□□□ 0.28
UBE3B-210ENST00000539599 ZBTB3Q9H5J0 574 aa16.78■□□□□ 0.28
UBE3B-210ENST00000539599 MED23Q9ULK4 1368 aa16.78■□□□□ 0.28
UBE3B-210ENST00000539599 NBPF26B4DH59 902 aa16.78■□□□□ 0.28
UBE3B-210ENST00000539599 LIG1P18858 919 aa16.78■□□□□ 0.28
UBE3B-210ENST00000539599 CABP4P57796 275 aa16.78■□□□□ 0.28
UBE3B-210ENST00000539599 NBPF14Q5TI25 921 aa16.78■□□□□ 0.28
UBE3B-210ENST00000539599 NBPF10Q6P3W6 841 aaKnown RBP16.78■□□□□ 0.28
UBE3B-210ENST00000539599 NBPF15Q8N660 670 aa16.78■□□□□ 0.28
UBE3B-210ENST00000539599 ATF3P18847 181 aa16.77■□□□□ 0.28
UBE3B-210ENST00000539599 RPS6KB1P23443 525 aa16.77■□□□□ 0.28
UBE3B-210ENST00000539599 ARID3AQ99856 593 aa16.77■□□□□ 0.28
UBE3B-210ENST00000539599 ZNF609O15014 1411 aa16.77■□□□□ 0.28
UBE3B-210ENST00000539599 ADCY5O95622 1261 aa16.77■□□□□ 0.28
UBE3B-210ENST00000539599 TM6SF1Q9BZW5 370 aa16.77■□□□□ 0.28
UBE3B-210ENST00000539599 TMEM94Q12767 1356 aa16.77■□□□□ 0.28
UBE3B-210ENST00000539599 CHST3Q7LGC8 479 aa16.77■□□□□ 0.27
UBE3B-210ENST00000539599 CEBPZQ03701 1054 aaKnown RBP16.76■□□□□ 0.27
UBE3B-210ENST00000539599 CKAP2LQ8IYA6 745 aa16.76■□□□□ 0.27
UBE3B-210ENST00000539599 FMNL2Q96PY5 1086 aa16.76■□□□□ 0.27
UBE3B-210ENST00000539599 SH2B1Q9NRF2 756 aaPredicted RBP16.76■□□□□ 0.27
UBE3B-210ENST00000539599 OVOS2A0A0G2JMS6 1433 aa16.76■□□□□ 0.27
UBE3B-210ENST00000539599 ZNF142P52746 1687 aaPredicted RBP16.75■□□□□ 0.27
UBE3B-210ENST00000539599 GOLIM4O00461 696 aa16.75■□□□□ 0.27
UBE3B-210ENST00000539599 CYP21A2P08686 494 aa16.75■□□□□ 0.27
UBE3B-210ENST00000539599 LRRC24Q50LG9 513 aa16.75■□□□□ 0.27
UBE3B-210ENST00000539599 STOX1Q6ZVD7 989 aa16.75■□□□□ 0.27
UBE3B-210ENST00000539599 SCN11AQ9UI33 1791 aa16.75■□□□□ 0.27
UBE3B-210ENST00000539599 HSP90AB3PQ58FF7 597 aa16.75■□□□□ 0.27
UBE3B-210ENST00000539599 ZSCAN31Q96LW9 406 aaPredicted RBP16.75■□□□□ 0.27
UBE3B-210ENST00000539599 COPRSQ9NQ92 184 aa16.75■□□□□ 0.27
UBE3B-210ENST00000539599 CCDC39Q9UFE4 941 aa16.75■□□□□ 0.27
UBE3B-210ENST00000539599 CAMTA1Q9Y6Y1 1673 aa16.75■□□□□ 0.27
UBE3B-210ENST00000539599 PHF14O94880 888 aa16.74■□□□□ 0.27
UBE3B-210ENST00000539599 HSP90B1P14625 803 aaKnown RBP16.74■□□□□ 0.27
UBE3B-210ENST00000539599 Q6ZUG5 572 aa16.74■□□□□ 0.27
UBE3B-210ENST00000539599 SPC24Q8NBT2 197 aa16.74■□□□□ 0.27
UBE3B-210ENST00000539599 PUS3Q9BZE2 481 aaKnown RBP16.74■□□□□ 0.27
UBE3B-210ENST00000539599 FTOQ9C0B1 505 aaKnown RBP eCLIP16.74■□□□□ 0.27
UBE3B-210ENST00000539599 ZNF500O60304 480 aaPredicted RBP16.74■□□□□ 0.27
UBE3B-210ENST00000539599 HSPA2P54652 639 aa16.74■□□□□ 0.27
UBE3B-210ENST00000539599 DCAF5Q96JK2 942 aa16.74■□□□□ 0.27
UBE3B-210ENST00000539599 CASP7P55210 303 aa16.73■□□□□ 0.27
UBE3B-210ENST00000539599 HSP90AA2PQ14568 343 aaPredicted RBP16.73■□□□□ 0.27
UBE3B-210ENST00000539599 NAP1L2Q9ULW6 460 aaPredicted RBP16.73■□□□□ 0.27
UBE3B-210ENST00000539599 HDAC5Q9UQL6 1122 aa16.73■□□□□ 0.27
UBE3B-210ENST00000539599 PSMA5P28066 241 aa16.73■□□□□ 0.27
UBE3B-210ENST00000539599 HS1BP3Q53T59 392 aa16.73■□□□□ 0.27
UBE3B-210ENST00000539599 TSC1Q92574 1164 aa16.73■□□□□ 0.27
UBE3B-210ENST00000539599 BRF1Q92994 677 aa16.73■□□□□ 0.27
UBE3B-210ENST00000539599 FUCA2Q9BTY2 467 aa16.73■□□□□ 0.27
UBE3B-210ENST00000539599 AFDNP55196 1824 aaKnown RBP16.73■□□□□ 0.27
UBE3B-210ENST00000539599 A0A087WWV3 80 aa16.72■□□□□ 0.27
UBE3B-210ENST00000539599 ATP5JP18859 108 aa16.72■□□□□ 0.27
UBE3B-210ENST00000539599 SNRKQ9NRH2 765 aa16.72■□□□□ 0.27
UBE3B-210ENST00000539599 TAOK2Q9UL54 1235 aa16.72■□□□□ 0.27
UBE3B-210ENST00000539599 HIP1O00291 1037 aa16.72■□□□□ 0.27
UBE3B-210ENST00000539599 FOXO4P98177 505 aa16.72■□□□□ 0.27
UBE3B-210ENST00000539599 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.72■□□□□ 0.27
UBE3B-210ENST00000539599 MST1RQ04912 1400 aa16.72■□□□□ 0.27
UBE3B-210ENST00000539599 ADAMTS7Q9UKP4 1686 aa16.72■□□□□ 0.27
UBE3B-210ENST00000539599 CCT2P78371 535 aaKnown RBP16.72■□□□□ 0.27
UBE3B-210ENST00000539599 RNF20Q5VTR2 975 aa16.72■□□□□ 0.27
UBE3B-210ENST00000539599 NEK1Q96PY6 1258 aa16.72■□□□□ 0.27
UBE3B-210ENST00000539599 ATP6V1DQ9Y5K8 247 aa16.72■□□□□ 0.27
UBE3B-210ENST00000539599 ALS2Q96Q42 1657 aa16.71■□□□□ 0.27
UBE3B-210ENST00000539599 ATG9AQ7Z3C6 839 aa16.71■□□□□ 0.27
UBE3B-210ENST00000539599 NCOA5Q9HCD5 579 aaKnown RBP16.71■□□□□ 0.27
UBE3B-210ENST00000539599 FAM177BA6PVY3 158 aa16.71■□□□□ 0.26
UBE3B-210ENST00000539599 RABL6Q3YEC7 729 aaPredicted RBP16.71■□□□□ 0.26
UBE3B-210ENST00000539599 TTLL5Q6EMB2 1281 aa16.71■□□□□ 0.26
UBE3B-210ENST00000539599 RAB11FIP4Q86YS3 637 aa16.71■□□□□ 0.26
UBE3B-210ENST00000539599 GPHNQ9NQX3 736 aaPredicted RBP16.71■□□□□ 0.26
UBE3B-210ENST00000539599 DACT1Q9NYF0 836 aa16.71■□□□□ 0.26
UBE3B-210ENST00000539599 GUCY1B3Q02153 619 aa16.7■□□□□ 0.26
UBE3B-210ENST00000539599 UQCRHLA0A096LP55 91 aa16.7■□□□□ 0.26
UBE3B-210ENST00000539599 UQCRHP07919 91 aa16.7■□□□□ 0.26
UBE3B-210ENST00000539599 KRT85P78386 507 aa16.7■□□□□ 0.26
UBE3B-210ENST00000539599 APOBRQ0VD83 1088 aa16.7■□□□□ 0.26
UBE3B-210ENST00000539599 TOM1L2Q6ZVM7 507 aa16.7■□□□□ 0.26
UBE3B-210ENST00000539599 LUZP1Q86V48 1076 aa16.7■□□□□ 0.26
UBE3B-210ENST00000539599 SYNE4Q8N205 404 aa16.7■□□□□ 0.26
UBE3B-210ENST00000539599 FAM13BQ9NYF5 915 aa16.7■□□□□ 0.26
UBE3B-210ENST00000539599 FGD1P98174 961 aa16.69■□□□□ 0.26
UBE3B-210ENST00000539599 SCRN1Q12765 414 aa16.69■□□□□ 0.26
UBE3B-210ENST00000539599 PLBD2Q8NHP8 589 aa16.69■□□□□ 0.26
UBE3B-210ENST00000539599 STRN4Q9NRL3 753 aa16.69■□□□□ 0.26
UBE3B-210ENST00000539599 SPATA32Q96LK8 384 aa16.69■□□□□ 0.26
UBE3B-210ENST00000539599 HAUS7Q99871 368 aa16.69■□□□□ 0.26
UBE3B-210ENST00000539599 ARFGEF2Q9Y6D5 1785 aa16.68■□□□□ 0.26
UBE3B-210ENST00000539599 KDM4AO75164 1064 aa16.68■□□□□ 0.26
UBE3B-210ENST00000539599 MCMDC2Q4G0Z9 681 aa16.68■□□□□ 0.26
UBE3B-210ENST00000539599 PI16Q6UXB8 463 aa16.68■□□□□ 0.26
UBE3B-210ENST00000539599 PGBD1Q96JS3 809 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms