RNA–Protein interactions for RNA: ENST00000539436.5

TRPT1-207, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 1,726 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-207ENST00000539436 RAB11FIP3O75154 756 aa23.7■■□□□ 1.38
TRPT1-207ENST00000539436 TPTE2Q6XPS3 522 aa23.7■■□□□ 1.38
TRPT1-207ENST00000539436 GREM2Q9H772 168 aa23.7■■□□□ 1.38
TRPT1-207ENST00000539436 TM4SF1P30408 202 aa23.69■■□□□ 1.38
TRPT1-207ENST00000539436 G3BP1Q13283 466 aaKnown RBP eCLIP23.69■■□□□ 1.38
TRPT1-207ENST00000539436 CCDC57Q2TAC2 916 aa23.69■■□□□ 1.38
TRPT1-207ENST00000539436 PELP1Q8IZL8 1130 aaKnown RBP23.69■■□□□ 1.38
TRPT1-207ENST00000539436 RHPN1Q8TCX5 695 aa23.69■■□□□ 1.38
TRPT1-207ENST00000539436 IL1RAPL2Q9NP60 686 aa23.69■■□□□ 1.38
TRPT1-207ENST00000539436 COPRSQ9NQ92 184 aa23.69■■□□□ 1.38
TRPT1-207ENST00000539436 HSP90AB4PQ58FF6 505 aa23.68■■□□□ 1.38
TRPT1-207ENST00000539436 CARMIL3Q8ND23 1372 aa23.68■■□□□ 1.38
TRPT1-207ENST00000539436 NPHP1O15259 732 aa23.67■■□□□ 1.38
TRPT1-207ENST00000539436 ABCC12Q96J65 1359 aa23.67■■□□□ 1.38
TRPT1-207ENST00000539436 IFIT5Q13325 482 aaKnown RBP23.67■■□□□ 1.38
TRPT1-207ENST00000539436 C3orf67Q6ZVT6 689 aa23.67■■□□□ 1.38
TRPT1-207ENST00000539436 OTUD7AQ8TE49 926 aaPredicted RBP23.67■■□□□ 1.38
TRPT1-207ENST00000539436 SASH1O94885 1247 aa23.66■■□□□ 1.38
TRPT1-207ENST00000539436 ITGA6P23229 1130 aa23.66■■□□□ 1.38
TRPT1-207ENST00000539436 MSL1Q68DK7 614 aa23.66■■□□□ 1.38
TRPT1-207ENST00000539436 UPF1Q92900 1129 aaKnown RBP eCLIP23.66■■□□□ 1.38
TRPT1-207ENST00000539436 KIF1BPQ96EK5 621 aa23.66■■□□□ 1.38
TRPT1-207ENST00000539436 COL24A1Q17RW2 1714 aa23.66■■□□□ 1.38
TRPT1-207ENST00000539436 SERPINB2P05120 415 aa23.65■■□□□ 1.38
TRPT1-207ENST00000539436 DDR1Q08345 913 aa23.65■■□□□ 1.38
TRPT1-207ENST00000539436 SLC10A5Q5PT55 438 aa23.65■■□□□ 1.38
TRPT1-207ENST00000539436 NLGN1Q8N2Q7 840 aa23.65■■□□□ 1.38
TRPT1-207ENST00000539436 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.65■■□□□ 1.38
TRPT1-207ENST00000539436 HSP90B1P14625 803 aaKnown RBP23.64■■□□□ 1.38
TRPT1-207ENST00000539436 PUS3Q9BZE2 481 aaKnown RBP23.64■■□□□ 1.38
TRPT1-207ENST00000539436 DDX60Q8IY21 1712 aaKnown RBP23.64■■□□□ 1.38
TRPT1-207ENST00000539436 ANKRD18BA2A2Z9 1011 aa23.64■■□□□ 1.37
TRPT1-207ENST00000539436 POLRMTO00411 1230 aaKnown RBP23.64■■□□□ 1.37
TRPT1-207ENST00000539436 LRRC24Q50LG9 513 aa23.64■■□□□ 1.37
TRPT1-207ENST00000539436 TAF7LQ5H9L4 462 aa23.64■■□□□ 1.37
TRPT1-207ENST00000539436 CNBD1Q8NA66 436 aa23.64■■□□□ 1.37
TRPT1-207ENST00000539436 PDGFDQ9GZP0 370 aaPredicted RBP23.64■■□□□ 1.37
TRPT1-207ENST00000539436 PRR5LQ6MZQ0 368 aa23.63■■□□□ 1.37
TRPT1-207ENST00000539436 ERC1Q8IUD2 1116 aa23.63■■□□□ 1.37
TRPT1-207ENST00000539436 SEC31BQ9NQW1 1179 aa23.63■■□□□ 1.37
TRPT1-207ENST00000539436 CCDC152Q4G0S7 254 aa23.62■■□□□ 1.37
TRPT1-207ENST00000539436 ATG9AQ7Z3C6 839 aa23.62■■□□□ 1.37
TRPT1-207ENST00000539436 PLEKHM2Q8IWE5 1019 aa23.62■■□□□ 1.37
TRPT1-207ENST00000539436 TFCP2Q12800 502 aa23.61■■□□□ 1.37
TRPT1-207ENST00000539436 NLRP3Q96P20 1036 aa23.61■■□□□ 1.37
TRPT1-207ENST00000539436 EYA2O00167 538 aa23.6■■□□□ 1.37
TRPT1-207ENST00000539436 MMP10P09238 476 aa23.59■■□□□ 1.37
TRPT1-207ENST00000539436 SF3B3Q15393 1217 aaKnown RBP23.59■■□□□ 1.37
TRPT1-207ENST00000539436 MYH3P11055 1940 aa23.59■■□□□ 1.37
TRPT1-207ENST00000539436 LDHAL6AQ6ZMR3 332 aa23.59■■□□□ 1.37
TRPT1-207ENST00000539436 CLASRPQ8N2M8 674 aaKnown RBP23.59■■□□□ 1.37
TRPT1-207ENST00000539436 LAMB2P55268 1798 aa23.58■■□□□ 1.37
TRPT1-207ENST00000539436 CIAO1O76071 339 aa23.57■■□□□ 1.36
TRPT1-207ENST00000539436 IL15P40933 162 aaPredicted RBP23.57■■□□□ 1.36
TRPT1-207ENST00000539436 ST5P78524 1137 aa23.57■■□□□ 1.36
TRPT1-207ENST00000539436 TSHZ3Q63HK5 1081 aa23.56■■□□□ 1.36
TRPT1-207ENST00000539436 EAF2Q96CJ1 260 aaPredicted RBP23.56■■□□□ 1.36
TRPT1-207ENST00000539436 PARP3Q9Y6F1 533 aa23.56■■□□□ 1.36
TRPT1-207ENST00000539436 SALL3Q9BXA9 1300 aa23.56■■□□□ 1.36
TRPT1-207ENST00000539436 AACSQ86V21 672 aa23.56■■□□□ 1.36
TRPT1-207ENST00000539436 CCDC8Q9H0W5 538 aaPredicted RBP23.56■■□□□ 1.36
TRPT1-207ENST00000539436 CNNM1Q9NRU3 951 aa23.56■■□□□ 1.36
TRPT1-207ENST00000539436 RTL9Q8NET4 1388 aa23.55■■□□□ 1.36
TRPT1-207ENST00000539436 PDE1AP54750 535 aa23.55■■□□□ 1.36
TRPT1-207ENST00000539436 RIPOR2Q9Y4F9 1068 aa23.55■■□□□ 1.36
TRPT1-207ENST00000539436 MX1P20591 662 aa23.54■■□□□ 1.36
TRPT1-207ENST00000539436 FBXO3Q9UK99 471 aa23.54■■□□□ 1.36
TRPT1-207ENST00000539436 QSER1Q2KHR3 1735 aa23.54■■□□□ 1.36
TRPT1-207ENST00000539436 TNRC6CQ9HCJ0 1690 aaKnown RBP23.53■■□□□ 1.36
TRPT1-207ENST00000539436 IFIT2P09913 472 aaKnown RBP23.53■■□□□ 1.36
TRPT1-207ENST00000539436 MPHOSPH8Q99549 860 aa23.53■■□□□ 1.36
TRPT1-207ENST00000539436 COL4A1P02462 1669 aa23.53■■□□□ 1.36
TRPT1-207ENST00000539436 IGHMBP2P38935 993 aaKnown RBP23.53■■□□□ 1.36
TRPT1-207ENST00000539436 TNNI3KQ59H18 835 aa23.53■■□□□ 1.36
TRPT1-207ENST00000539436 TLR7Q9NYK1 1049 aaKnown RBP23.53■■□□□ 1.36
TRPT1-207ENST00000539436 CEP126Q9P2H0 1117 aa23.53■■□□□ 1.36
TRPT1-207ENST00000539436 FPGT-TNNI3KV9GXZ4 949 aa23.53■■□□□ 1.36
TRPT1-207ENST00000539436 CELF1Q92879 486 aaKnown RBP23.52■■□□□ 1.36
TRPT1-207ENST00000539436 CDC5LQ99459 802 aaKnown RBP23.52■■□□□ 1.36
TRPT1-207ENST00000539436 METTL24Q5JXM2 366 aa23.51■■□□□ 1.35
TRPT1-207ENST00000539436 ILDR2Q71H61 639 aa23.51■■□□□ 1.35
TRPT1-207ENST00000539436 ANKRD18AQ8IVF6 992 aa23.51■■□□□ 1.35
TRPT1-207ENST00000539436 TIMM10P62072 90 aa23.5■■□□□ 1.35
TRPT1-207ENST00000539436 HELBQ8NG08 1087 aaPredicted RBP23.5■■□□□ 1.35
TRPT1-207ENST00000539436 OSBPL3Q9H4L5 887 aa23.5■■□□□ 1.35
TRPT1-207ENST00000539436 STAP2Q9UGK3 403 aa23.5■■□□□ 1.35
TRPT1-207ENST00000539436 GSPT1P15170 499 aaKnown RBP23.5■■□□□ 1.35
TRPT1-207ENST00000539436 TTC22Q5TAA0 569 aa23.5■■□□□ 1.35
TRPT1-207ENST00000539436 DDX46Q7L014 1031 aaKnown RBP23.5■■□□□ 1.35
TRPT1-207ENST00000539436 CASZ1Q86V15 1759 aa23.49■■□□□ 1.35
TRPT1-207ENST00000539436 NEUROD6Q96NK8 337 aa23.49■■□□□ 1.35
TRPT1-207ENST00000539436 RIC1Q4ADV7 1423 aa23.48■■□□□ 1.35
TRPT1-207ENST00000539436 R3HDM1Q15032 1099 aaKnown RBP23.48■■□□□ 1.35
TRPT1-207ENST00000539436 RPS8P62241 208 aaKnown RBP23.47■■□□□ 1.35
TRPT1-207ENST00000539436 RPGRQ92834 1020 aaKnown RBP23.47■■□□□ 1.35
TRPT1-207ENST00000539436 TAF1P21675 1872 aa23.47■■□□□ 1.35
TRPT1-207ENST00000539436 CRY2Q49AN0 593 aa23.47■■□□□ 1.35
TRPT1-207ENST00000539436 BMP2KLQ5H9B9 411 aa23.47■■□□□ 1.35
TRPT1-207ENST00000539436 DBNDD2Q9BQY9 259 aa23.47■■□□□ 1.35
TRPT1-207ENST00000539436 BRIP1Q9BX63 1249 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms