RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 RILPL2Q969X0 211 aa13.62□□□□□ -0.23
CTCFL-212ENST00000539382 UPF2Q9HAU5 1272 aaKnown RBP13.62□□□□□ -0.23
CTCFL-212ENST00000539382 BCL2L12Q9HB09 334 aa13.62□□□□□ -0.23
CTCFL-212ENST00000539382 TRIM6-TRIM34B2RNG4 842 aa13.61□□□□□ -0.23
CTCFL-212ENST00000539382 IFIT2P09913 472 aaKnown RBP13.61□□□□□ -0.23
CTCFL-212ENST00000539382 SLC4A3P48751 1232 aa13.61□□□□□ -0.23
CTCFL-212ENST00000539382 NBR1Q14596 966 aa13.61□□□□□ -0.23
CTCFL-212ENST00000539382 RC3H1Q5TC82 1133 aaKnown RBP13.61□□□□□ -0.23
CTCFL-212ENST00000539382 GREM2Q9H772 168 aa13.61□□□□□ -0.23
CTCFL-212ENST00000539382 NIP7Q9Y221 180 aaKnown RBP eCLIP13.61□□□□□ -0.23
CTCFL-212ENST00000539382 GNPATO15228 680 aa13.61□□□□□ -0.23
CTCFL-212ENST00000539382 RPS6KA4O75676 772 aa13.61□□□□□ -0.23
CTCFL-212ENST00000539382 RBM6P78332 1123 aaKnown RBP13.61□□□□□ -0.23
CTCFL-212ENST00000539382 FAM196AQ6ZSG2 479 aa13.61□□□□□ -0.23
CTCFL-212ENST00000539382 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.61□□□□□ -0.23
CTCFL-212ENST00000539382 SRP68Q9UHB9 627 aaKnown RBP13.61□□□□□ -0.23
CTCFL-212ENST00000539382 HCLS1P14317 486 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-212ENST00000539382 CTSWP56202 376 aa13.6□□□□□ -0.23
CTCFL-212ENST00000539382 TNNI3KQ59H18 835 aa13.6□□□□□ -0.23
CTCFL-212ENST00000539382 ZNF772Q68DY9 489 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-212ENST00000539382 ECHDC1Q9NTX5 307 aa13.6□□□□□ -0.23
CTCFL-212ENST00000539382 RGS17Q9UGC6 210 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-212ENST00000539382 DBNLQ9UJU6 430 aaKnown RBP13.6□□□□□ -0.23
CTCFL-212ENST00000539382 FPGT-TNNI3KV9GXZ4 949 aa13.6□□□□□ -0.23
CTCFL-212ENST00000539382 TAF1LQ8IZX4 1826 aa13.6□□□□□ -0.23
CTCFL-212ENST00000539382 CCDC57Q2TAC2 916 aa13.6□□□□□ -0.23
CTCFL-212ENST00000539382 IL25Q9H293 177 aa13.6□□□□□ -0.23
CTCFL-212ENST00000539382 TTC41PQ6P2S7 1318 aa13.6□□□□□ -0.23
CTCFL-212ENST00000539382 BCORQ6W2J9 1755 aa13.59□□□□□ -0.23
CTCFL-212ENST00000539382 EYA2O00167 538 aa13.59□□□□□ -0.23
CTCFL-212ENST00000539382 NTSR2O95665 410 aa13.59□□□□□ -0.23
CTCFL-212ENST00000539382 ITGA6P23229 1130 aa13.59□□□□□ -0.23
CTCFL-212ENST00000539382 CHMLP26374 656 aa13.59□□□□□ -0.23
CTCFL-212ENST00000539382 RBM25P49756 843 aaKnown RBP13.59□□□□□ -0.23
CTCFL-212ENST00000539382 MKRN4PQ13434 485 aaPredicted RBP13.59□□□□□ -0.23
CTCFL-212ENST00000539382 USPL1Q5W0Q7 1092 aa13.59□□□□□ -0.23
CTCFL-212ENST00000539382 UTP14AQ9BVJ6 771 aaKnown RBP13.59□□□□□ -0.23
CTCFL-212ENST00000539382 PDE8AO60658 829 aa13.58□□□□□ -0.24
CTCFL-212ENST00000539382 GLRX3O76003 335 aaKnown RBP13.58□□□□□ -0.24
CTCFL-212ENST00000539382 TIMM10P62072 90 aa13.58□□□□□ -0.24
CTCFL-212ENST00000539382 TBC1D9BQ66K14 1250 aa13.58□□□□□ -0.24
CTCFL-212ENST00000539382 CLEC4GQ6UXB4 293 aa13.58□□□□□ -0.24
CTCFL-212ENST00000539382 ARHGEF1Q92888 912 aaKnown RBP13.58□□□□□ -0.24
CTCFL-212ENST00000539382 KIF2CQ99661 725 aa13.58□□□□□ -0.24
CTCFL-212ENST00000539382 DBNDD2Q9BQY9 259 aa13.58□□□□□ -0.24
CTCFL-212ENST00000539382 SH3TC1Q8TE82 1336 aa13.58□□□□□ -0.24
CTCFL-212ENST00000539382 IL15P40933 162 aaPredicted RBP13.57□□□□□ -0.24
CTCFL-212ENST00000539382 IFIT5Q13325 482 aaKnown RBP13.57□□□□□ -0.24
CTCFL-212ENST00000539382 BICDL1Q6ZP65 573 aa13.57□□□□□ -0.24
CTCFL-212ENST00000539382 NARFQ9UHQ1 456 aa13.57□□□□□ -0.24
CTCFL-212ENST00000539382 RTCBQ9Y3I0 505 aaKnown RBP13.57□□□□□ -0.24
CTCFL-212ENST00000539382 C4BP0C0L5 1744 aa13.57□□□□□ -0.24
CTCFL-212ENST00000539382 CIAO1O76071 339 aa13.57□□□□□ -0.24
CTCFL-212ENST00000539382 PHF14O94880 888 aa13.57□□□□□ -0.24
CTCFL-212ENST00000539382 PARP10Q53GL7 1025 aa13.57□□□□□ -0.24
CTCFL-212ENST00000539382 DDRGK1Q96HY6 314 aa13.57□□□□□ -0.24
CTCFL-212ENST00000539382 USP26Q9BXU7 913 aa13.57□□□□□ -0.24
CTCFL-212ENST00000539382 BOLA2Q9H3K6 86 aa13.57□□□□□ -0.24
CTCFL-212ENST00000539382 ZNF652Q9Y2D9 606 aa13.56□□□□□ -0.24
CTCFL-212ENST00000539382 NDUFB9Q9Y6M9 179 aa13.56□□□□□ -0.24
CTCFL-212ENST00000539382 MYH3P11055 1940 aa13.56□□□□□ -0.24
CTCFL-212ENST00000539382 ERC2O15083 957 aa13.56□□□□□ -0.24
CTCFL-212ENST00000539382 C3orf67Q6ZVT6 689 aa13.56□□□□□ -0.24
CTCFL-212ENST00000539382 EDC3Q96F86 508 aaKnown RBP13.56□□□□□ -0.24
CTCFL-212ENST00000539382 ESYT1Q9BSJ8 1104 aa13.56□□□□□ -0.24
CTCFL-212ENST00000539382 RIPOR2Q9Y4F9 1068 aa13.56□□□□□ -0.24
CTCFL-212ENST00000539382 GPATCH3Q96I76 525 aa13.55□□□□□ -0.24
CTCFL-212ENST00000539382 SEC31BQ9NQW1 1179 aa13.55□□□□□ -0.24
CTCFL-212ENST00000539382 ZNF219Q9P2Y4 722 aaPredicted RBP13.55□□□□□ -0.24
CTCFL-212ENST00000539382 DDX60Q8IY21 1712 aaKnown RBP13.55□□□□□ -0.24
CTCFL-212ENST00000539382 SCN7AQ01118 1682 aa13.55□□□□□ -0.24
CTCFL-212ENST00000539382 RXRBP28702 533 aa13.55□□□□□ -0.24
CTCFL-212ENST00000539382 ERFEQ4G0M1 354 aa13.55□□□□□ -0.24
CTCFL-212ENST00000539382 POTEAQ6S8J7 498 aa13.55□□□□□ -0.24
CTCFL-212ENST00000539382 SAMD1Q6SPF0 538 aaPredicted RBP13.55□□□□□ -0.24
CTCFL-212ENST00000539382 CASC1Q6TDU7 716 aa13.55□□□□□ -0.24
CTCFL-212ENST00000539382 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
CTCFL-212ENST00000539382 COL4A1P02462 1669 aa13.54□□□□□ -0.24
CTCFL-212ENST00000539382 TAF7LQ5H9L4 462 aa13.54□□□□□ -0.24
CTCFL-212ENST00000539382 LDHAL6AQ6ZMR3 332 aa13.54□□□□□ -0.24
CTCFL-212ENST00000539382 CNTROBQ8N137 903 aa13.54□□□□□ -0.24
CTCFL-212ENST00000539382 NEUROD6Q96NK8 337 aa13.54□□□□□ -0.24
CTCFL-212ENST00000539382 A0A1B0GUL7 405 aa13.53□□□□□ -0.24
CTCFL-212ENST00000539382 ANKRD18BA2A2Z9 1011 aa13.53□□□□□ -0.24
CTCFL-212ENST00000539382 ZPR1O75312 459 aa13.53□□□□□ -0.24
CTCFL-212ENST00000539382 AK7Q96M32 723 aa13.53□□□□□ -0.24
CTCFL-212ENST00000539382 GPR108Q9NPR9 543 aa13.53□□□□□ -0.24
CTCFL-212ENST00000539382 ZNF609O15014 1411 aa13.53□□□□□ -0.24
CTCFL-212ENST00000539382 RIC1Q4ADV7 1423 aa13.53□□□□□ -0.24
CTCFL-212ENST00000539382 C4AP0C0L4 1744 aa13.53□□□□□ -0.24
CTCFL-212ENST00000539382 ATP5JP18859 108 aa13.53□□□□□ -0.24
CTCFL-212ENST00000539382 CCDC24Q8N4L8 307 aa13.53□□□□□ -0.24
CTCFL-212ENST00000539382 CEP126Q9P2H0 1117 aa13.53□□□□□ -0.24
CTCFL-212ENST00000539382 AK9Q5TCS8 1911 aa13.53□□□□□ -0.24
CTCFL-212ENST00000539382 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.52□□□□□ -0.24
CTCFL-212ENST00000539382 ADORA1P30542 326 aa13.52□□□□□ -0.24
CTCFL-212ENST00000539382 TXNRD1Q16881 649 aa13.52□□□□□ -0.24
CTCFL-212ENST00000539382 TRAPPC3LQ5T215 181 aa13.52□□□□□ -0.24
CTCFL-212ENST00000539382 VGLL2Q8N8G2 317 aa13.52□□□□□ -0.24
CTCFL-212ENST00000539382 ABCC12Q96J65 1359 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms