RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 KDM4AO75164 1064 aa8.31□□□□□ -1.08
PROM1-219ENST00000539194 CDC37L1Q7L3B6 337 aa8.31□□□□□ -1.08
PROM1-219ENST00000539194 ATG9AQ7Z3C6 839 aa8.31□□□□□ -1.08
PROM1-219ENST00000539194 AACSQ86V21 672 aa8.31□□□□□ -1.08
PROM1-219ENST00000539194 RUFY2Q8WXA3 655 aa8.31□□□□□ -1.08
PROM1-219ENST00000539194 PIBF1Q8WXW3 757 aa8.31□□□□□ -1.08
PROM1-219ENST00000539194 NEDD4P46934 1319 aa8.31□□□□□ -1.08
PROM1-219ENST00000539194 SH3TC1Q8TE82 1336 aa8.31□□□□□ -1.08
PROM1-219ENST00000539194 XPCQ01831 940 aaPredicted RBP8.31□□□□□ -1.08
PROM1-219ENST00000539194 JAKMIP1Q96N16 626 aaKnown RBP8.31□□□□□ -1.08
PROM1-219ENST00000539194 TIAM2Q8IVF5 1701 aa8.31□□□□□ -1.08
PROM1-219ENST00000539194 SLIT2O94813 1529 aa8.31□□□□□ -1.08
PROM1-219ENST00000539194 CHGBP05060 677 aa8.3□□□□□ -1.08
PROM1-219ENST00000539194 EVCP57679 992 aa8.3□□□□□ -1.08
PROM1-219ENST00000539194 CCDC83Q8IWF9 413 aa8.3□□□□□ -1.08
PROM1-219ENST00000539194 ZNF496Q96IT1 587 aaPredicted RBP8.3□□□□□ -1.08
PROM1-219ENST00000539194 NAP1L5Q96NT1 182 aaPredicted RBP8.3□□□□□ -1.08
PROM1-219ENST00000539194 HAUS7Q99871 368 aa8.3□□□□□ -1.08
PROM1-219ENST00000539194 CYP46A1Q9Y6A2 500 aa8.3□□□□□ -1.08
PROM1-219ENST00000539194 NUP98P52948 1817 aa8.3□□□□□ -1.08
PROM1-219ENST00000539194 PHLPP1O60346 1717 aa8.3□□□□□ -1.08
PROM1-219ENST00000539194 H7C1W4 665 aa8.3□□□□□ -1.08
PROM1-219ENST00000539194 PHF14O94880 888 aa8.3□□□□□ -1.08
PROM1-219ENST00000539194 TNNI3KQ59H18 835 aa8.3□□□□□ -1.08
PROM1-219ENST00000539194 NOL8Q76FK4 1167 aaKnown RBP8.3□□□□□ -1.08
PROM1-219ENST00000539194 KLHDC4Q8TBB5 520 aa8.3□□□□□ -1.08
PROM1-219ENST00000539194 SYAP1Q96A49 352 aaPredicted RBP8.3□□□□□ -1.08
PROM1-219ENST00000539194 HMG20BQ9P0W2 317 aa8.3□□□□□ -1.08
PROM1-219ENST00000539194 USP16Q9Y5T5 823 aa8.3□□□□□ -1.08
PROM1-219ENST00000539194 FPGT-TNNI3KV9GXZ4 949 aa8.3□□□□□ -1.08
PROM1-219ENST00000539194 CTDNEP1O95476 244 aa8.3□□□□□ -1.08
PROM1-219ENST00000539194 NCLP19338 710 aaKnown RBP8.3□□□□□ -1.08
PROM1-219ENST00000539194 EXOSC10Q01780 885 aaKnown RBP8.3□□□□□ -1.08
PROM1-219ENST00000539194 RESTQ13127 1097 aa8.3□□□□□ -1.08
PROM1-219ENST00000539194 LARP1Q6PKG0 1096 aaKnown RBP8.3□□□□□ -1.08
PROM1-219ENST00000539194 STOX1Q6ZVD7 989 aa8.3□□□□□ -1.08
PROM1-219ENST00000539194 C1orf141Q5JVX7 400 aa8.29□□□□□ -1.08
PROM1-219ENST00000539194 KRT28Q7Z3Y7 464 aa8.29□□□□□ -1.08
PROM1-219ENST00000539194 PGBD1Q96JS3 809 aa8.29□□□□□ -1.08
PROM1-219ENST00000539194 MRVI1Q9Y6F6 885 aa8.29□□□□□ -1.08
PROM1-219ENST00000539194 COL5A2P05997 1499 aaPredicted RBP8.29□□□□□ -1.08
PROM1-219ENST00000539194 NBPF26B4DH59 902 aa8.29□□□□□ -1.08
PROM1-219ENST00000539194 NKX1-1Q15270 411 aaPredicted RBP8.29□□□□□ -1.08
PROM1-219ENST00000539194 NBPF14Q5TI25 921 aa8.29□□□□□ -1.08
PROM1-219ENST00000539194 NBPF10Q6P3W6 841 aaKnown RBP8.29□□□□□ -1.08
PROM1-219ENST00000539194 NBPF15Q8N660 670 aa8.29□□□□□ -1.08
PROM1-219ENST00000539194 GTF3C6Q969F1 213 aa8.29□□□□□ -1.08
PROM1-219ENST00000539194 GPR108Q9NPR9 543 aa8.29□□□□□ -1.08
PROM1-219ENST00000539194 DIAPH3Q9NSV4 1193 aa8.29□□□□□ -1.08
PROM1-219ENST00000539194 HDAC5Q9UQL6 1122 aa8.29□□□□□ -1.08
PROM1-219ENST00000539194 NFATC2IPQ8NCF5 419 aa8.29□□□□□ -1.08
PROM1-219ENST00000539194 XAGE3Q8WTP9 111 aa8.29□□□□□ -1.08
PROM1-219ENST00000539194 PDCL3Q9H2J4 239 aa8.29□□□□□ -1.08
PROM1-219ENST00000539194 C9orf78Q9NZ63 289 aaPredicted RBP8.29□□□□□ -1.08
PROM1-219ENST00000539194 SMC3Q9UQE7 1217 aa8.29□□□□□ -1.08
PROM1-219ENST00000539194 CYP21A2P08686 494 aa8.29□□□□□ -1.08
PROM1-219ENST00000539194 HCLS1P14317 486 aaPredicted RBP8.29□□□□□ -1.08
PROM1-219ENST00000539194 SLC39A6Q13433 755 aa8.29□□□□□ -1.08
PROM1-219ENST00000539194 ILDR1Q86SU0 546 aaPredicted RBP8.29□□□□□ -1.08
PROM1-219ENST00000539194 NECAB1Q8N987 351 aa8.29□□□□□ -1.08
PROM1-219ENST00000539194 RNF214Q8ND24 703 aa8.29□□□□□ -1.08
PROM1-219ENST00000539194 EDC3Q96F86 508 aaKnown RBP8.29□□□□□ -1.08
PROM1-219ENST00000539194 CCDC8Q9H0W5 538 aaPredicted RBP8.29□□□□□ -1.08
PROM1-219ENST00000539194 USP25Q9UHP3 1055 aa8.29□□□□□ -1.08
PROM1-219ENST00000539194 IFIT2P09913 472 aaKnown RBP8.28□□□□□ -1.08
PROM1-219ENST00000539194 LIG1P18858 919 aa8.28□□□□□ -1.08
PROM1-219ENST00000539194 COPS6Q7L5N1 327 aa8.28□□□□□ -1.08
PROM1-219ENST00000539194 PLA2G4DQ86XP0 818 aa8.28□□□□□ -1.08
PROM1-219ENST00000539194 KIAA1524Q8TCG1 905 aa8.28□□□□□ -1.08
PROM1-219ENST00000539194 DLEC1Q9Y238 1755 aa8.28□□□□□ -1.08
PROM1-219ENST00000539194 DTNBO60941 627 aa8.28□□□□□ -1.08
PROM1-219ENST00000539194 ATRNO75882 1429 aa8.28□□□□□ -1.08
PROM1-219ENST00000539194 ADCY5O95622 1261 aa8.28□□□□□ -1.08
PROM1-219ENST00000539194 MSNP26038 577 aaKnown RBP8.28□□□□□ -1.08
PROM1-219ENST00000539194 CSPP1Q1MSJ5 1256 aa8.28□□□□□ -1.08
PROM1-219ENST00000539194 ZNF710Q8N1W2 664 aa8.28□□□□□ -1.08
PROM1-219ENST00000539194 DCAF5Q96JK2 942 aa8.28□□□□□ -1.08
PROM1-219ENST00000539194 C19orf44Q9H6X5 657 aa8.28□□□□□ -1.08
PROM1-219ENST00000539194 GPATCH3Q96I76 525 aa8.28□□□□□ -1.08
PROM1-219ENST00000539194 ATP6V1DQ9Y5K8 247 aa8.28□□□□□ -1.08
PROM1-219ENST00000539194 DDX58O95786 925 aaKnown RBP8.27□□□□□ -1.09
PROM1-219ENST00000539194 TFCP2Q12800 502 aa8.27□□□□□ -1.09
PROM1-219ENST00000539194 GIMAP6Q6P9H5 292 aa8.27□□□□□ -1.09
PROM1-219ENST00000539194 ANKRD13DQ6ZTN6 518 aa8.27□□□□□ -1.09
PROM1-219ENST00000539194 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.27□□□□□ -1.09
PROM1-219ENST00000539194 DYNC1I1O14576 645 aa8.27□□□□□ -1.09
PROM1-219ENST00000539194 SNW1Q13573 536 aaKnown RBP8.27□□□□□ -1.09
PROM1-219ENST00000539194 ANKRD1Q15327 319 aa8.27□□□□□ -1.09
PROM1-219ENST00000539194 MYRIPQ8NFW9 859 aa8.27□□□□□ -1.09
PROM1-219ENST00000539194 PLBD2Q8NHP8 589 aa8.27□□□□□ -1.09
PROM1-219ENST00000539194 BOLA2Q9H3K6 86 aa8.27□□□□□ -1.09
PROM1-219ENST00000539194 SNRPA1P09661 255 aaKnown RBP8.27□□□□□ -1.09
PROM1-219ENST00000539194 PSMA5P28066 241 aa8.27□□□□□ -1.09
PROM1-219ENST00000539194 SASS6Q6UVJ0 657 aa8.27□□□□□ -1.09
PROM1-219ENST00000539194 LEO1Q8WVC0 666 aaPredicted RBP8.27□□□□□ -1.09
PROM1-219ENST00000539194 ATG3Q9NT62 314 aa8.27□□□□□ -1.09
PROM1-219ENST00000539194 CARMIL3Q8ND23 1372 aa8.27□□□□□ -1.09
PROM1-219ENST00000539194 RIC1Q4ADV7 1423 aa8.26□□□□□ -1.09
PROM1-219ENST00000539194 SPATA31A3Q5VYP0 1347 aa8.26□□□□□ -1.09
PROM1-219ENST00000539194 ROBO1Q9Y6N7 1651 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms