RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 ATP8B2P98198 1209 aa12.71□□□□□ -0.37
CLPB-210ENST00000539148 SF3B3Q15393 1217 aaKnown RBP12.71□□□□□ -0.37
CLPB-210ENST00000539148 RABL6Q3YEC7 729 aaPredicted RBP12.71□□□□□ -0.37
CLPB-210ENST00000539148 LMBR1LQ6UX01 489 aa12.71□□□□□ -0.37
CLPB-210ENST00000539148 DDX46Q7L014 1031 aaKnown RBP12.71□□□□□ -0.37
CLPB-210ENST00000539148 TMC4Q7Z404 712 aa12.71□□□□□ -0.37
CLPB-210ENST00000539148 SUCLG2Q96I99 432 aa12.71□□□□□ -0.37
CLPB-210ENST00000539148 BICC1Q9H694 974 aaKnown RBP12.71□□□□□ -0.37
CLPB-210ENST00000539148 ATF5Q9Y2D1 282 aaPredicted RBP12.71□□□□□ -0.37
CLPB-210ENST00000539148 CSF1RP07333 972 aa12.7□□□□□ -0.38
CLPB-210ENST00000539148 HCLS1P14317 486 aaPredicted RBP12.7□□□□□ -0.38
CLPB-210ENST00000539148 ANKRD44Q8N8A2 993 aa12.7□□□□□ -0.38
CLPB-210ENST00000539148 RBM17Q96I25 401 aaKnown RBP12.7□□□□□ -0.38
CLPB-210ENST00000539148 PPP1R1BQ9UD71 204 aaPredicted RBP12.7□□□□□ -0.38
CLPB-210ENST00000539148 CD2APQ9Y5K6 639 aa12.7□□□□□ -0.38
CLPB-210ENST00000539148 NPR1P16066 1061 aa12.69□□□□□ -0.38
CLPB-210ENST00000539148 IGHMBP2P38935 993 aaKnown RBP12.69□□□□□ -0.38
CLPB-210ENST00000539148 TGFB2P61812 414 aa12.69□□□□□ -0.38
CLPB-210ENST00000539148 FOXO4P98177 505 aa12.69□□□□□ -0.38
CLPB-210ENST00000539148 CEP85Q6P2H3 762 aa12.69□□□□□ -0.38
CLPB-210ENST00000539148 ERC1Q8IUD2 1116 aa12.69□□□□□ -0.38
CLPB-210ENST00000539148 TTLL11Q8NHH1 800 aa12.69□□□□□ -0.38
CLPB-210ENST00000539148 ANKRD31Q8N7Z5 1873 aa12.69□□□□□ -0.38
CLPB-210ENST00000539148 HDAC1Q13547 482 aaPredicted RBP12.68□□□□□ -0.38
CLPB-210ENST00000539148 ANKRD18AQ8IVF6 992 aa12.68□□□□□ -0.38
CLPB-210ENST00000539148 SSH3Q8TE77 659 aa12.68□□□□□ -0.38
CLPB-210ENST00000539148 CNKSR1Q969H4 720 aa12.68□□□□□ -0.38
CLPB-210ENST00000539148 GCC1Q96CN9 775 aa12.68□□□□□ -0.38
CLPB-210ENST00000539148 MASTLQ96GX5 879 aa12.68□□□□□ -0.38
CLPB-210ENST00000539148 CRAMP1Q96RY5 1269 aa12.68□□□□□ -0.38
CLPB-210ENST00000539148 MPHOSPH8Q99549 860 aa12.68□□□□□ -0.38
CLPB-210ENST00000539148 PDGFDQ9GZP0 370 aaPredicted RBP12.68□□□□□ -0.38
CLPB-210ENST00000539148 TSHZ2Q9NRE2 1034 aa12.68□□□□□ -0.38
CLPB-210ENST00000539148 C10orf71Q711Q0 1435 aa12.68□□□□□ -0.38
CLPB-210ENST00000539148 DLEC1Q9Y238 1755 aa12.68□□□□□ -0.38
CLPB-210ENST00000539148 KLRG2A4D1S0 409 aaPredicted RBP12.67□□□□□ -0.38
CLPB-210ENST00000539148 BBOX1O75936 387 aa12.67□□□□□ -0.38
CLPB-210ENST00000539148 G3BP1Q13283 466 aaKnown RBP eCLIP12.67□□□□□ -0.38
CLPB-210ENST00000539148 OS9Q13438 667 aaPredicted RBP12.67□□□□□ -0.38
CLPB-210ENST00000539148 CRY2Q49AN0 593 aa12.67□□□□□ -0.38
CLPB-210ENST00000539148 GRIPAP1Q4V328 841 aa12.67□□□□□ -0.38
CLPB-210ENST00000539148 STYK1Q6J9G0 422 aa12.67□□□□□ -0.38
CLPB-210ENST00000539148 B4GALNT3Q6L9W6 998 aa12.67□□□□□ -0.38
CLPB-210ENST00000539148 JARID2Q92833 1246 aaPredicted RBP12.67□□□□□ -0.38
CLPB-210ENST00000539148 C1orf115Q9H7X2 142 aa12.67□□□□□ -0.38
CLPB-210ENST00000539148 ABCC12Q96J65 1359 aa12.67□□□□□ -0.38
CLPB-210ENST00000539148 RAB11FIP3O75154 756 aa12.66□□□□□ -0.38
CLPB-210ENST00000539148 ITGA6P23229 1130 aa12.66□□□□□ -0.38
CLPB-210ENST00000539148 HOXA10P31260 410 aaPredicted RBP12.66□□□□□ -0.38
CLPB-210ENST00000539148 C2CD5Q86YS7 1000 aa12.66□□□□□ -0.38
CLPB-210ENST00000539148 SPEF2Q9C093 1822 aa12.65□□□□□ -0.38
CLPB-210ENST00000539148 SURF6O75683 361 aaKnown RBP12.65□□□□□ -0.38
CLPB-210ENST00000539148 CIAO1O76071 339 aa12.65□□□□□ -0.38
CLPB-210ENST00000539148 SRGNP10124 158 aa12.65□□□□□ -0.38
CLPB-210ENST00000539148 RPS8P62241 208 aaKnown RBP12.65□□□□□ -0.38
CLPB-210ENST00000539148 POLA2Q14181 598 aa12.65□□□□□ -0.38
CLPB-210ENST00000539148 LDHAL6AQ6ZMR3 332 aa12.65□□□□□ -0.38
CLPB-210ENST00000539148 CENPQQ7L2Z9 268 aaPredicted RBP12.65□□□□□ -0.38
CLPB-210ENST00000539148 SYNE4Q8N205 404 aa12.65□□□□□ -0.38
CLPB-210ENST00000539148 KAZALD1Q96I82 304 aa12.65□□□□□ -0.38
CLPB-210ENST00000539148 GREM2Q9H772 168 aa12.65□□□□□ -0.38
CLPB-210ENST00000539148 COPRSQ9NQ92 184 aa12.65□□□□□ -0.38
CLPB-210ENST00000539148 CNNM1Q9NRU3 951 aa12.65□□□□□ -0.38
CLPB-210ENST00000539148 CACNA1SQ13698 1873 aa12.65□□□□□ -0.38
CLPB-210ENST00000539148 MROH5Q6ZUA9 1318 aa12.64□□□□□ -0.39
CLPB-210ENST00000539148 TNRC6CQ9HCJ0 1690 aaKnown RBP12.64□□□□□ -0.39
CLPB-210ENST00000539148 IL15P40933 162 aaPredicted RBP12.64□□□□□ -0.39
CLPB-210ENST00000539148 GRAPQ13588 217 aa12.64□□□□□ -0.39
CLPB-210ENST00000539148 FAM161AQ3B820 660 aa12.64□□□□□ -0.39
CLPB-210ENST00000539148 EPHA10Q5JZY3 1008 aa12.64□□□□□ -0.39
CLPB-210ENST00000539148 SOGA3Q5TF21 947 aa12.64□□□□□ -0.39
CLPB-210ENST00000539148 CC2D2BQ6DHV5 1058 aa12.64□□□□□ -0.39
CLPB-210ENST00000539148 KLHL34Q8N239 644 aa12.64□□□□□ -0.39
CLPB-210ENST00000539148 GRAPLQ8TC17 118 aaPredicted RBP12.64□□□□□ -0.39
CLPB-210ENST00000539148 ZNF622Q969S3 477 aaKnown RBP eCLIP12.64□□□□□ -0.39
CLPB-210ENST00000539148 SGIP1Q9BQI5 828 aa12.64□□□□□ -0.39
CLPB-210ENST00000539148 ANKRD2Q9GZV1 360 aa12.64□□□□□ -0.39
CLPB-210ENST00000539148 PCDHB15Q9Y5E8 787 aa12.64□□□□□ -0.39
CLPB-210ENST00000539148 PTGER2P43116 358 aa12.63□□□□□ -0.39
CLPB-210ENST00000539148 CCDC24Q8N4L8 307 aa12.63□□□□□ -0.39
CLPB-210ENST00000539148 DCTPP1Q9H773 170 aa12.63□□□□□ -0.39
CLPB-210ENST00000539148 BSDC1Q9NW68 430 aaPredicted RBP12.63□□□□□ -0.39
CLPB-210ENST00000539148 PIM2Q9P1W9 311 aa12.63□□□□□ -0.39
CLPB-210ENST00000539148 CEP126Q9P2H0 1117 aa12.63□□□□□ -0.39
CLPB-210ENST00000539148 AKAP2Q9Y2D5 859 aa12.63□□□□□ -0.39
CLPB-210ENST00000539148 NOP58Q9Y2X3 529 aaKnown RBP12.63□□□□□ -0.39
CLPB-210ENST00000539148 PNMA6EA0A0J9YXQ4 647 aa12.62□□□□□ -0.39
CLPB-210ENST00000539148 EYA2O00167 538 aa12.62□□□□□ -0.39
CLPB-210ENST00000539148 TTLL6Q8N841 843 aa12.62□□□□□ -0.39
CLPB-210ENST00000539148 KIF1BPQ96EK5 621 aa12.62□□□□□ -0.39
CLPB-210ENST00000539148 CCDC85AQ96PX6 553 aaPredicted RBP12.62□□□□□ -0.39
CLPB-210ENST00000539148 COL11A2P13942 1736 aaPredicted RBP12.62□□□□□ -0.39
CLPB-210ENST00000539148 PTPN12Q05209 780 aaKnown RBP12.61□□□□□ -0.39
CLPB-210ENST00000539148 CLASRPQ8N2M8 674 aaKnown RBP12.61□□□□□ -0.39
CLPB-210ENST00000539148 LRRCC1Q9C099 1032 aa12.61□□□□□ -0.39
CLPB-210ENST00000539148 TAF1P21675 1872 aa12.61□□□□□ -0.39
CLPB-210ENST00000539148 UTRNP46939 3433 aa12.6□□□□□ -0.39
CLPB-210ENST00000539148 BRCA1P38398 1863 aaKnown RBP12.6□□□□□ -0.39
CLPB-210ENST00000539148 PPEF1O14829 653 aaPredicted RBP12.6□□□□□ -0.39
CLPB-210ENST00000539148 METTL24Q5JXM2 366 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms