RNA–Protein interactions for RNA: ENST00000539063.5

PHC1-206, Transcript of polyhomeotic homolog 1, humanhuman

TSL 3

Gene PHC1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-206ENST00000539063 ECHDC1Q9NTX5 307 aa11.78□□□□□ -0.52
PHC1-206ENST00000539063 SRP68Q9UHB9 627 aaKnown RBP11.78□□□□□ -0.52
PHC1-206ENST00000539063 AKAP2Q9Y2D5 859 aa11.78□□□□□ -0.52
PHC1-206ENST00000539063 USP42Q9H9J4 1324 aaKnown RBP11.78□□□□□ -0.52
PHC1-206ENST00000539063 C4BP0C0L5 1744 aa11.77□□□□□ -0.52
PHC1-206ENST00000539063 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.77□□□□□ -0.53
PHC1-206ENST00000539063 HCLS1P14317 486 aaPredicted RBP11.77□□□□□ -0.53
PHC1-206ENST00000539063 GSPT1P15170 499 aaKnown RBP11.77□□□□□ -0.53
PHC1-206ENST00000539063 ITGA6P23229 1130 aa11.77□□□□□ -0.53
PHC1-206ENST00000539063 MFAP1P55081 439 aaKnown RBP11.77□□□□□ -0.53
PHC1-206ENST00000539063 TFCP2Q12800 502 aa11.77□□□□□ -0.53
PHC1-206ENST00000539063 TPTE2Q6XPS3 522 aa11.77□□□□□ -0.53
PHC1-206ENST00000539063 FLAD1Q8NFF5 587 aa11.77□□□□□ -0.53
PHC1-206ENST00000539063 TTLL11Q8NHH1 800 aa11.77□□□□□ -0.53
PHC1-206ENST00000539063 RILPL2Q969X0 211 aa11.77□□□□□ -0.53
PHC1-206ENST00000539063 DDRGK1Q96HY6 314 aa11.77□□□□□ -0.53
PHC1-206ENST00000539063 CNNM1Q9NRU3 951 aa11.77□□□□□ -0.53
PHC1-206ENST00000539063 LRRC4BQ9NT99 713 aa11.77□□□□□ -0.53
PHC1-206ENST00000539063 SCN7AQ01118 1682 aa11.76□□□□□ -0.53
PHC1-206ENST00000539063 MSH5O43196 834 aa11.76□□□□□ -0.53
PHC1-206ENST00000539063 SASH1O94885 1247 aa11.76□□□□□ -0.53
PHC1-206ENST00000539063 SDSP20132 328 aa11.76□□□□□ -0.53
PHC1-206ENST00000539063 IGHMBP2P38935 993 aaKnown RBP11.76□□□□□ -0.53
PHC1-206ENST00000539063 TNNI3KQ59H18 835 aa11.76□□□□□ -0.53
PHC1-206ENST00000539063 METTL24Q5JXM2 366 aa11.76□□□□□ -0.53
PHC1-206ENST00000539063 GORABQ5T7V8 394 aa11.76□□□□□ -0.53
PHC1-206ENST00000539063 TBC1D9BQ66K14 1250 aa11.76□□□□□ -0.53
PHC1-206ENST00000539063 LDHAL6AQ6ZMR3 332 aa11.76□□□□□ -0.53
PHC1-206ENST00000539063 CDC5LQ99459 802 aaKnown RBP11.76□□□□□ -0.53
PHC1-206ENST00000539063 MPHOSPH8Q99549 860 aa11.76□□□□□ -0.53
PHC1-206ENST00000539063 CCDC8Q9H0W5 538 aaPredicted RBP11.76□□□□□ -0.53
PHC1-206ENST00000539063 GPR108Q9NPR9 543 aa11.76□□□□□ -0.53
PHC1-206ENST00000539063 TFCP2L1Q9NZI6 479 aa11.76□□□□□ -0.53
PHC1-206ENST00000539063 RGS17Q9UGC6 210 aaPredicted RBP11.76□□□□□ -0.53
PHC1-206ENST00000539063 FPGT-TNNI3KV9GXZ4 949 aa11.76□□□□□ -0.53
PHC1-206ENST00000539063 SALL3Q9BXA9 1300 aa11.76□□□□□ -0.53
PHC1-206ENST00000539063 NUP98P52948 1817 aa11.76□□□□□ -0.53
PHC1-206ENST00000539063 MYH14Q7Z406 1995 aaKnown RBP11.76□□□□□ -0.53
PHC1-206ENST00000539063 BCORQ6W2J9 1755 aa11.75□□□□□ -0.53
PHC1-206ENST00000539063 TSHZ3Q63HK5 1081 aa11.75□□□□□ -0.53
PHC1-206ENST00000539063 TBC1D9Q6ZT07 1266 aa11.75□□□□□ -0.53
PHC1-206ENST00000539063 SYNE4Q8N205 404 aa11.75□□□□□ -0.53
PHC1-206ENST00000539063 ZNF594Q96JF6 807 aaPredicted RBP11.75□□□□□ -0.53
PHC1-206ENST00000539063 NEUROD6Q96NK8 337 aa11.75□□□□□ -0.53
PHC1-206ENST00000539063 GREM2Q9H772 168 aa11.75□□□□□ -0.53
PHC1-206ENST00000539063 DAXXQ9UER7 740 aaPredicted RBP11.75□□□□□ -0.53
PHC1-206ENST00000539063 CARMIL3Q8ND23 1372 aa11.75□□□□□ -0.53
PHC1-206ENST00000539063 ERFEQ4G0M1 354 aa11.74□□□□□ -0.53
PHC1-206ENST00000539063 EAF2Q96CJ1 260 aaPredicted RBP11.74□□□□□ -0.53
PHC1-206ENST00000539063 NLRP3Q96P20 1036 aa11.74□□□□□ -0.53
PHC1-206ENST00000539063 HIP1O00291 1037 aa11.73□□□□□ -0.53
PHC1-206ENST00000539063 REC8O95072 547 aa11.73□□□□□ -0.53
PHC1-206ENST00000539063 BAG6P46379 1132 aa11.73□□□□□ -0.53
PHC1-206ENST00000539063 ST5P78524 1137 aa11.73□□□□□ -0.53
PHC1-206ENST00000539063 LRRC24Q50LG9 513 aa11.73□□□□□ -0.53
PHC1-206ENST00000539063 MROH5Q6ZUA9 1318 aa11.73□□□□□ -0.53
PHC1-206ENST00000539063 SMIM5Q71RC9 77 aa11.73□□□□□ -0.53
PHC1-206ENST00000539063 ATG9AQ7Z3C6 839 aa11.73□□□□□ -0.53
PHC1-206ENST00000539063 CNBD1Q8NA66 436 aa11.73□□□□□ -0.53
PHC1-206ENST00000539063 RTL9Q8NET4 1388 aa11.73□□□□□ -0.53
PHC1-206ENST00000539063 BCL2L12Q9HB09 334 aa11.73□□□□□ -0.53
PHC1-206ENST00000539063 ATP2B3Q16720 1220 aa11.72□□□□□ -0.53
PHC1-206ENST00000539063 CCDC158Q5M9N0 1113 aa11.72□□□□□ -0.53
PHC1-206ENST00000539063 ANKRD18AQ8IVF6 992 aa11.72□□□□□ -0.53
PHC1-206ENST00000539063 PI4K2BQ8TCG2 481 aa11.72□□□□□ -0.53
PHC1-206ENST00000539063 RUFY2Q8WXA3 655 aa11.72□□□□□ -0.53
PHC1-206ENST00000539063 EVI5LQ96CN4 794 aa11.72□□□□□ -0.53
PHC1-206ENST00000539063 PUS3Q9BZE2 481 aaKnown RBP11.72□□□□□ -0.53
PHC1-206ENST00000539063 C22orf23Q9BZE7 217 aa11.72□□□□□ -0.53
PHC1-206ENST00000539063 DIAPH3Q9NSV4 1193 aa11.72□□□□□ -0.53
PHC1-206ENST00000539063 STK32BQ9NY57 414 aa11.72□□□□□ -0.53
PHC1-206ENST00000539063 TAF1LQ8IZX4 1826 aa11.72□□□□□ -0.53
PHC1-206ENST00000539063 A0A1B0GUL7 405 aa11.71□□□□□ -0.53
PHC1-206ENST00000539063 ATP5JP18859 108 aa11.71□□□□□ -0.53
PHC1-206ENST00000539063 MCCP23508 829 aa11.71□□□□□ -0.53
PHC1-206ENST00000539063 NFIXQ14938 502 aa11.71□□□□□ -0.53
PHC1-206ENST00000539063 SF3B3Q15393 1217 aaKnown RBP11.71□□□□□ -0.53
PHC1-206ENST00000539063 SLC10A5Q5PT55 438 aa11.71□□□□□ -0.53
PHC1-206ENST00000539063 TTC39AQ5SRH9 613 aa11.71□□□□□ -0.53
PHC1-206ENST00000539063 DDX46Q7L014 1031 aaKnown RBP11.71□□□□□ -0.53
PHC1-206ENST00000539063 DBNDD2Q9BQY9 259 aa11.71□□□□□ -0.53
PHC1-206ENST00000539063 ZNF609O15014 1411 aa11.7□□□□□ -0.54
PHC1-206ENST00000539063 MAP4K4O95819 1239 aaPredicted RBP11.7□□□□□ -0.54
PHC1-206ENST00000539063 GYS1P13807 737 aa11.7□□□□□ -0.54
PHC1-206ENST00000539063 SLC5A1P13866 664 aa11.7□□□□□ -0.54
PHC1-206ENST00000539063 LRRFIP1Q32MZ4 808 aaKnown RBP11.7□□□□□ -0.54
PHC1-206ENST00000539063 PROM2Q8N271 834 aa11.7□□□□□ -0.54
PHC1-206ENST00000539063 NLGN1Q8N2Q7 840 aa11.7□□□□□ -0.54
PHC1-206ENST00000539063 TBC1D32Q96NH3 1257 aa11.7□□□□□ -0.54
PHC1-206ENST00000539063 FSD1Q9BTV5 496 aa11.7□□□□□ -0.54
PHC1-206ENST00000539063 BOLA2Q9H3K6 86 aa11.7□□□□□ -0.54
PHC1-206ENST00000539063 TLR7Q9NYK1 1049 aaKnown RBP11.7□□□□□ -0.54
PHC1-206ENST00000539063 DBNLQ9UJU6 430 aaKnown RBP11.7□□□□□ -0.54
PHC1-206ENST00000539063 SEC24BO95487 1268 aa11.69□□□□□ -0.54
PHC1-206ENST00000539063 IFIT1P09914 478 aaKnown RBP11.69□□□□□ -0.54
PHC1-206ENST00000539063 BECN1Q14457 450 aa11.69□□□□□ -0.54
PHC1-206ENST00000539063 PUM3Q15397 648 aaKnown RBP11.69□□□□□ -0.54
PHC1-206ENST00000539063 ZNF827Q17R98 1081 aa11.69□□□□□ -0.54
PHC1-206ENST00000539063 KIAA1211Q6ZU35 1233 aa11.69□□□□□ -0.54
PHC1-206ENST00000539063 AMIGO3Q86WK7 504 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms