RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 BCL2L13Q9BXK5 485 aa18.67■□□□□ 0.58
PBX3-212ENST00000538998 ZNF408Q9H9D4 720 aa18.67■□□□□ 0.58
PBX3-212ENST00000538998 BBOX1O75936 387 aa18.66■□□□□ 0.58
PBX3-212ENST00000538998 DGKZQ13574 1117 aa18.66■□□□□ 0.58
PBX3-212ENST00000538998 SP8Q8IXZ3 490 aa18.66■□□□□ 0.58
PBX3-212ENST00000538998 MPNDQ8N594 471 aa18.65■□□□□ 0.58
PBX3-212ENST00000538998 RAD17O75943 681 aa18.64■□□□□ 0.57
PBX3-212ENST00000538998 HIRAP54198 1017 aaPredicted RBP18.64■□□□□ 0.57
PBX3-212ENST00000538998 TRPM4Q8TD43 1214 aa18.63■□□□□ 0.57
PBX3-212ENST00000538998 CNOT7Q9UIV1 285 aaKnown RBP18.63■□□□□ 0.57
PBX3-212ENST00000538998 H7C1D1 291 aa18.62■□□□□ 0.57
PBX3-212ENST00000538998 HUNKP57058 714 aa18.62■□□□□ 0.57
PBX3-212ENST00000538998 NFE2L2Q16236 605 aa18.62■□□□□ 0.57
PBX3-212ENST00000538998 DDX46Q7L014 1031 aaKnown RBP18.62■□□□□ 0.57
PBX3-212ENST00000538998 TMC4Q7Z404 712 aa18.61■□□□□ 0.57
PBX3-212ENST00000538998 LRP10Q7Z4F1 713 aa18.61■□□□□ 0.57
PBX3-212ENST00000538998 THUMPD2Q9BTF0 503 aaKnown RBP18.61■□□□□ 0.57
PBX3-212ENST00000538998 GRAPQ13588 217 aa18.6■□□□□ 0.57
PBX3-212ENST00000538998 HSP90AB3PQ58FF7 597 aa18.6■□□□□ 0.57
PBX3-212ENST00000538998 USP48Q86UV5 1035 aa18.6■□□□□ 0.57
PBX3-212ENST00000538998 MICALL2Q8IY33 904 aa18.6■□□□□ 0.57
PBX3-212ENST00000538998 GRAPLQ8TC17 118 aaPredicted RBP18.6■□□□□ 0.57
PBX3-212ENST00000538998 PLEKHF1Q96S99 279 aa18.6■□□□□ 0.57
PBX3-212ENST00000538998 SAGE1Q9NXZ1 904 aa18.6■□□□□ 0.57
PBX3-212ENST00000538998 DLG5Q8TDM6 1919 aa18.59■□□□□ 0.57
PBX3-212ENST00000538998 YDJCA8MPS7 323 aa18.59■□□□□ 0.57
PBX3-212ENST00000538998 PDIA6Q15084 440 aa18.59■□□□□ 0.57
PBX3-212ENST00000538998 DPF2Q92785 391 aa18.59■□□□□ 0.57
PBX3-212ENST00000538998 ZIC5Q96T25 663 aa18.59■□□□□ 0.57
PBX3-212ENST00000538998 HCLS1P14317 486 aaPredicted RBP18.58■□□□□ 0.56
PBX3-212ENST00000538998 RGMBQ6NW40 437 aa18.58■□□□□ 0.56
PBX3-212ENST00000538998 NLRP10Q86W26 655 aa18.58■□□□□ 0.56
PBX3-212ENST00000538998 TSPYL4Q9UJ04 414 aa18.58■□□□□ 0.56
PBX3-212ENST00000538998 CASP8AP2Q9UKL3 1982 aa18.58■□□□□ 0.56
PBX3-212ENST00000538998 ANKRD36CQ5JPF3 1778 aa18.58■□□□□ 0.56
PBX3-212ENST00000538998 SH3TC1Q8TE82 1336 aa18.57■□□□□ 0.56
PBX3-212ENST00000538998 MAPK8IP3Q9UPT6 1336 aa18.57■□□□□ 0.56
PBX3-212ENST00000538998 DUOX1Q9NRD9 1551 aa18.57■□□□□ 0.56
PBX3-212ENST00000538998 SHTN1A0MZ66 631 aa18.57■□□□□ 0.56
PBX3-212ENST00000538998 EIF2S2P20042 333 aaKnown RBP18.57■□□□□ 0.56
PBX3-212ENST00000538998 KRT26Q7Z3Y9 468 aa18.57■□□□□ 0.56
PBX3-212ENST00000538998 CCDC102AQ96A19 550 aa18.57■□□□□ 0.56
PBX3-212ENST00000538998 PNNQ9H307 717 aaKnown RBP18.57■□□□□ 0.56
PBX3-212ENST00000538998 GBA2Q9HCG7 927 aaPredicted RBP18.57■□□□□ 0.56
PBX3-212ENST00000538998 TRMT112Q9UI30 125 aaKnown RBP18.57■□□□□ 0.56
PBX3-212ENST00000538998 LAMB2P55268 1798 aa18.56■□□□□ 0.56
PBX3-212ENST00000538998 FAM155AB1AL88 458 aaPredicted RBP18.56■□□□□ 0.56
PBX3-212ENST00000538998 PROSER3Q2NL68 480 aa18.56■□□□□ 0.56
PBX3-212ENST00000538998 C2orf69Q8N8R5 385 aa18.56■□□□□ 0.56
PBX3-212ENST00000538998 ZBTB12Q9Y330 459 aaPredicted RBP18.56■□□□□ 0.56
PBX3-212ENST00000538998 PSMD14O00487 310 aa18.55■□□□□ 0.56
PBX3-212ENST00000538998 RPS12P25398 132 aaKnown RBP18.55■□□□□ 0.56
PBX3-212ENST00000538998 WASHC4Q2M389 1173 aa18.55■□□□□ 0.56
PBX3-212ENST00000538998 SAMD7Q7Z3H4 446 aa18.55■□□□□ 0.56
PBX3-212ENST00000538998 DCPSQ96C86 337 aaKnown RBP18.55■□□□□ 0.56
PBX3-212ENST00000538998 LRRC37AA6NMS7 1700 aa18.54■□□□□ 0.56
PBX3-212ENST00000538998 ANXA1P04083 346 aa18.54■□□□□ 0.56
PBX3-212ENST00000538998 TCIRG1Q13488 830 aa18.54■□□□□ 0.56
PBX3-212ENST00000538998 TBC1D10BQ4KMP7 808 aaPredicted RBP18.54■□□□□ 0.56
PBX3-212ENST00000538998 COPS6Q7L5N1 327 aa18.54■□□□□ 0.56
PBX3-212ENST00000538998 BABAM1Q9NWV8 329 aa18.54■□□□□ 0.56
PBX3-212ENST00000538998 ZNF157P51786 506 aaPredicted RBP18.53■□□□□ 0.56
PBX3-212ENST00000538998 KIF23Q02241 960 aaPredicted RBP18.53■□□□□ 0.56
PBX3-212ENST00000538998 AIMP1Q12904 312 aaKnown RBP18.53■□□□□ 0.56
PBX3-212ENST00000538998 DLK2Q6UY11 383 aa18.53■□□□□ 0.56
PBX3-212ENST00000538998 XAGE3Q8WTP9 111 aa18.53■□□□□ 0.56
PBX3-212ENST00000538998 DBNDD1Q9H9R9 158 aa18.52■□□□□ 0.56
PBX3-212ENST00000538998 RNF186Q9NXI6 227 aa18.52■□□□□ 0.56
PBX3-212ENST00000538998 ADM5C9JUS6 153 aa18.51■□□□□ 0.55
PBX3-212ENST00000538998 TNRC18O15417 2968 aaPredicted RBP18.51■□□□□ 0.55
PBX3-212ENST00000538998 TRPA1O75762 1119 aa18.51■□□□□ 0.55
PBX3-212ENST00000538998 EGFRP00533 1210 aa18.51■□□□□ 0.55
PBX3-212ENST00000538998 SOX10P56693 466 aa18.51■□□□□ 0.55
PBX3-212ENST00000538998 EYA3Q99504 573 aa18.51■□□□□ 0.55
PBX3-212ENST00000538998 NSFL1CQ9UNZ2 370 aaKnown RBP18.51■□□□□ 0.55
PBX3-212ENST00000538998 C6orf229H3BNL8 230 aa18.5■□□□□ 0.55
PBX3-212ENST00000538998 ECE2O60344 883 aa18.5■□□□□ 0.55
PBX3-212ENST00000538998 SLC10A3P09131 477 aa18.5■□□□□ 0.55
PBX3-212ENST00000538998 KIF4BQ2VIQ3 1234 aa18.49■□□□□ 0.55
PBX3-212ENST00000538998 RBM26Q5T8P6 1007 aaKnown RBP18.49■□□□□ 0.55
PBX3-212ENST00000538998 SULF1Q8IWU6 871 aa18.49■□□□□ 0.55
PBX3-212ENST00000538998 REM2Q8IYK8 340 aaPredicted RBP18.49■□□□□ 0.55
PBX3-212ENST00000538998 NECTIN2Q92692 538 aa18.49■□□□□ 0.55
PBX3-212ENST00000538998 POLLQ9UGP5 575 aa18.49■□□□□ 0.55
PBX3-212ENST00000538998 RTL9Q8NET4 1388 aa18.48■□□□□ 0.55
PBX3-212ENST00000538998 RIMBP2O15034 1052 aa18.48■□□□□ 0.55
PBX3-212ENST00000538998 RIPK4P57078 832 aa18.48■□□□□ 0.55
PBX3-212ENST00000538998 LMOD3Q0VAK6 560 aa18.48■□□□□ 0.55
PBX3-212ENST00000538998 SF3B3Q15393 1217 aaKnown RBP18.48■□□□□ 0.55
PBX3-212ENST00000538998 CTU1Q7Z7A3 348 aaKnown RBP18.48■□□□□ 0.55
PBX3-212ENST00000538998 CELF1Q92879 486 aaKnown RBP18.48■□□□□ 0.55
PBX3-212ENST00000538998 GGA3Q9NZ52 723 aa18.48■□□□□ 0.55
PBX3-212ENST00000538998 DDX60Q8IY21 1712 aaKnown RBP18.47■□□□□ 0.55
PBX3-212ENST00000538998 GPSM2P81274 684 aa18.47■□□□□ 0.55
PBX3-212ENST00000538998 CSRNP1Q96S65 589 aa18.47■□□□□ 0.55
PBX3-212ENST00000538998 DOK7Q18PE1 504 aa18.46■□□□□ 0.55
PBX3-212ENST00000538998 PRPF38BQ5VTL8 546 aaKnown RBP18.46■□□□□ 0.55
PBX3-212ENST00000538998 KCNQ5Q9NR82 932 aa18.46■□□□□ 0.55
PBX3-212ENST00000538998 TAF1P21675 1872 aa18.46■□□□□ 0.54
PBX3-212ENST00000538998 VIL1P09327 827 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms