RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 NFATC2IPQ8NCF5 419 aa17.49■□□□□ 0.39
CDCA3-207ENST00000538862 FOXD4L4Q8WXT5 416 aaPredicted RBP17.49■□□□□ 0.39
CDCA3-207ENST00000538862 TFCP2L1Q9NZI6 479 aa17.49■□□□□ 0.39
CDCA3-207ENST00000538862 SYAP1Q96A49 352 aaPredicted RBP17.49■□□□□ 0.39
CDCA3-207ENST00000538862 GPATCH3Q96I76 525 aa17.49■□□□□ 0.39
CDCA3-207ENST00000538862 CHAMP1Q96JM3 812 aa17.49■□□□□ 0.39
CDCA3-207ENST00000538862 ECHDC1Q9NTX5 307 aa17.49■□□□□ 0.39
CDCA3-207ENST00000538862 NSFL1CQ9UNZ2 370 aaKnown RBP17.49■□□□□ 0.39
CDCA3-207ENST00000538862 SIPA1L3O60292 1781 aaPredicted RBP17.48■□□□□ 0.39
CDCA3-207ENST00000538862 LOC102724428A0A0B4J2F2 783 aa17.48■□□□□ 0.39
CDCA3-207ENST00000538862 SIK1P57059 783 aa17.48■□□□□ 0.39
CDCA3-207ENST00000538862 NAP1L5Q96NT1 182 aaPredicted RBP17.48■□□□□ 0.39
CDCA3-207ENST00000538862 ATF5Q9Y2D1 282 aaPredicted RBP17.48■□□□□ 0.39
CDCA3-207ENST00000538862 UTYO14607 1347 aa17.48■□□□□ 0.39
CDCA3-207ENST00000538862 ADAMTS7Q9UKP4 1686 aa17.47■□□□□ 0.39
CDCA3-207ENST00000538862 DIAPH3Q9NSV4 1193 aa17.47■□□□□ 0.39
CDCA3-207ENST00000538862 LIMCH1Q9UPQ0 1083 aa17.47■□□□□ 0.39
CDCA3-207ENST00000538862 PNPLA7Q6ZV29 1317 aa17.47■□□□□ 0.39
CDCA3-207ENST00000538862 SYCE3A1L190 88 aa17.47■□□□□ 0.39
CDCA3-207ENST00000538862 CWC27Q6UX04 472 aaKnown RBP17.47■□□□□ 0.39
CDCA3-207ENST00000538862 LINS1Q8NG48 757 aa17.47■□□□□ 0.39
CDCA3-207ENST00000538862 SPON1Q9HCB6 807 aa17.47■□□□□ 0.39
CDCA3-207ENST00000538862 C4BP0C0L5 1744 aa17.46■□□□□ 0.39
CDCA3-207ENST00000538862 DDX58O95786 925 aaKnown RBP17.46■□□□□ 0.39
CDCA3-207ENST00000538862 ATP6V1AP38606 617 aa17.46■□□□□ 0.39
CDCA3-207ENST00000538862 ITPK1Q13572 414 aa17.46■□□□□ 0.39
CDCA3-207ENST00000538862 SMIM5Q71RC9 77 aa17.46■□□□□ 0.39
CDCA3-207ENST00000538862 RASEFQ8IZ41 740 aa17.46■□□□□ 0.39
CDCA3-207ENST00000538862 KCNB2Q92953 911 aa17.46■□□□□ 0.39
CDCA3-207ENST00000538862 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.46■□□□□ 0.39
CDCA3-207ENST00000538862 QSER1Q2KHR3 1735 aa17.46■□□□□ 0.39
CDCA3-207ENST00000538862 IFIT2P09913 472 aaKnown RBP17.45■□□□□ 0.38
CDCA3-207ENST00000538862 AK2P54819 239 aa17.45■□□□□ 0.38
CDCA3-207ENST00000538862 PROSER3Q2NL68 480 aa17.45■□□□□ 0.38
CDCA3-207ENST00000538862 TMEM87AQ8NBN3 555 aa17.45■□□□□ 0.38
CDCA3-207ENST00000538862 LINC00116Q8NCU8 138 aa17.45■□□□□ 0.38
CDCA3-207ENST00000538862 EVI5LQ96CN4 794 aa17.45■□□□□ 0.38
CDCA3-207ENST00000538862 SLC4A9Q96Q91 983 aa17.45■□□□□ 0.38
CDCA3-207ENST00000538862 TM6SF1Q9BZW5 370 aa17.45■□□□□ 0.38
CDCA3-207ENST00000538862 DDX21Q9NR30 783 aaKnown RBP eCLIP17.45■□□□□ 0.38
CDCA3-207ENST00000538862 GRM8O00222 908 aa17.45■□□□□ 0.38
CDCA3-207ENST00000538862 PTCD1O75127 700 aaKnown RBP17.45■□□□□ 0.38
CDCA3-207ENST00000538862 SLC52A2Q9HAB3 445 aa17.45■□□□□ 0.38
CDCA3-207ENST00000538862 PHF14O94880 888 aa17.44■□□□□ 0.38
CDCA3-207ENST00000538862 MSNP26038 577 aaKnown RBP17.44■□□□□ 0.38
CDCA3-207ENST00000538862 AMIGO3Q86WK7 504 aa17.44■□□□□ 0.38
CDCA3-207ENST00000538862 RPAP1Q9BWH6 1393 aaPredicted RBP17.44■□□□□ 0.38
CDCA3-207ENST00000538862 HIP1O00291 1037 aa17.43■□□□□ 0.38
CDCA3-207ENST00000538862 RUFY3Q7L099 469 aa17.43■□□□□ 0.38
CDCA3-207ENST00000538862 MRC1P22897 1456 aa17.43■□□□□ 0.38
CDCA3-207ENST00000538862 SLC39A6Q13433 755 aa17.43■□□□□ 0.38
CDCA3-207ENST00000538862 VPS53Q5VIR6 699 aa17.43■□□□□ 0.38
CDCA3-207ENST00000538862 USP48Q86UV5 1035 aa17.43■□□□□ 0.38
CDCA3-207ENST00000538862 UBR3Q6ZT12 1888 aa17.42■□□□□ 0.38
CDCA3-207ENST00000538862 TCHHQ07283 1943 aa17.42■□□□□ 0.38
CDCA3-207ENST00000538862 ZSCAN22P10073 491 aaPredicted RBP17.42■□□□□ 0.38
CDCA3-207ENST00000538862 CWF19L2Q2TBE0 894 aaKnown RBP17.42■□□□□ 0.38
CDCA3-207ENST00000538862 COL23A1Q86Y22 540 aaPredicted RBP17.42■□□□□ 0.38
CDCA3-207ENST00000538862 ZSCAN31Q96LW9 406 aaPredicted RBP17.42■□□□□ 0.38
CDCA3-207ENST00000538862 AK7Q96M32 723 aa17.42■□□□□ 0.38
CDCA3-207ENST00000538862 NOL7Q9UMY1 257 aaKnown RBP17.42■□□□□ 0.38
CDCA3-207ENST00000538862 PA2G4Q9UQ80 394 aaKnown RBP17.42■□□□□ 0.38
CDCA3-207ENST00000538862 CASTP20810 708 aaKnown RBP17.41■□□□□ 0.38
CDCA3-207ENST00000538862 PTGER2P43116 358 aa17.41■□□□□ 0.38
CDCA3-207ENST00000538862 G3BP1Q13283 466 aaKnown RBP eCLIP17.41■□□□□ 0.38
CDCA3-207ENST00000538862 AACSQ86V21 672 aa17.41■□□□□ 0.38
CDCA3-207ENST00000538862 MTFR1LQ9H019 292 aa17.41■□□□□ 0.38
CDCA3-207ENST00000538862 TSPY26PQ9H489 355 aa17.41■□□□□ 0.38
CDCA3-207ENST00000538862 ZSWIM6Q9HCJ5 1215 aa17.41■□□□□ 0.38
CDCA3-207ENST00000538862 PPP1R1BQ9UD71 204 aaPredicted RBP17.41■□□□□ 0.38
CDCA3-207ENST00000538862 ATP6V1DQ9Y5K8 247 aa17.41■□□□□ 0.38
CDCA3-207ENST00000538862 PRAMEF22A3QJZ6 481 aa17.41■□□□□ 0.38
CDCA3-207ENST00000538862 STX6O43752 255 aa17.41■□□□□ 0.38
CDCA3-207ENST00000538862 PDIA6Q15084 440 aa17.41■□□□□ 0.38
CDCA3-207ENST00000538862 NECTIN1Q15223 517 aa17.41■□□□□ 0.38
CDCA3-207ENST00000538862 KLHL34Q8N239 644 aa17.41■□□□□ 0.38
CDCA3-207ENST00000538862 KAZALD1Q96I82 304 aa17.41■□□□□ 0.38
CDCA3-207ENST00000538862 SUCLG2Q96I99 432 aa17.41■□□□□ 0.38
CDCA3-207ENST00000538862 SH2B1Q9NRF2 756 aaPredicted RBP17.41■□□□□ 0.38
CDCA3-207ENST00000538862 SNRKQ9NRH2 765 aa17.41■□□□□ 0.38
CDCA3-207ENST00000538862 SMC3Q9UQE7 1217 aa17.41■□□□□ 0.38
CDCA3-207ENST00000538862 SASH1O94885 1247 aa17.4■□□□□ 0.38
CDCA3-207ENST00000538862 PTH1RQ03431 593 aa17.4■□□□□ 0.38
CDCA3-207ENST00000538862 COL5A3P25940 1745 aaPredicted RBP17.39■□□□□ 0.38
CDCA3-207ENST00000538862 GADD45BO75293 160 aaPredicted RBP17.39■□□□□ 0.37
CDCA3-207ENST00000538862 SYT1P21579 422 aa17.39■□□□□ 0.37
CDCA3-207ENST00000538862 BICC1Q9H694 974 aaKnown RBP17.39■□□□□ 0.37
CDCA3-207ENST00000538862 PDRG1Q9NUG6 133 aa17.39■□□□□ 0.37
CDCA3-207ENST00000538862 CYP46A1Q9Y6A2 500 aa17.39■□□□□ 0.37
CDCA3-207ENST00000538862 MYH14Q7Z406 1995 aaKnown RBP17.39■□□□□ 0.37
CDCA3-207ENST00000538862 CCDC171Q6TFL3 1326 aa17.39■□□□□ 0.37
CDCA3-207ENST00000538862 ZKSCAN1P17029 563 aaPredicted RBP17.39■□□□□ 0.37
CDCA3-207ENST00000538862 MCM5P33992 734 aa17.39■□□□□ 0.37
CDCA3-207ENST00000538862 PRPF40BQ6NWY9 871 aaKnown RBP17.39■□□□□ 0.37
CDCA3-207ENST00000538862 GNPATO15228 680 aa17.38■□□□□ 0.37
CDCA3-207ENST00000538862 LETM1O95202 739 aaPredicted RBP17.38■□□□□ 0.37
CDCA3-207ENST00000538862 F13A1P00488 732 aa17.38■□□□□ 0.37
CDCA3-207ENST00000538862 PDIA4P13667 645 aaKnown RBP17.38■□□□□ 0.37
CDCA3-207ENST00000538862 MSL1Q68DK7 614 aa17.38■□□□□ 0.37
CDCA3-207ENST00000538862 ZNF790Q6PG37 636 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms