RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 PRELPP51888 382 aa17.6■□□□□ 0.41
CD4-208ENST00000538827 NBPF5PQ86XG9 351 aaPredicted RBP17.6■□□□□ 0.41
CD4-208ENST00000538827 NUTM1Q86Y26 1132 aa17.6■□□□□ 0.41
CD4-208ENST00000538827 SYNE4Q8N205 404 aa17.6■□□□□ 0.41
CD4-208ENST00000538827 KAZALD1Q96I82 304 aa17.6■□□□□ 0.41
CD4-208ENST00000538827 SPEF2Q9C093 1822 aa17.6■□□□□ 0.41
CD4-208ENST00000538827 TNRC6CQ9HCJ0 1690 aaKnown RBP17.59■□□□□ 0.41
CD4-208ENST00000538827 ABCC12Q96J65 1359 aa17.59■□□□□ 0.41
CD4-208ENST00000538827 NFIXQ14938 502 aa17.59■□□□□ 0.41
CD4-208ENST00000538827 COL13A1Q5TAT6 717 aaPredicted RBP17.59■□□□□ 0.41
CD4-208ENST00000538827 MSL1Q68DK7 614 aa17.59■□□□□ 0.41
CD4-208ENST00000538827 NYXQ9GZU5 481 aa17.59■□□□□ 0.41
CD4-208ENST00000538827 TOMM70O94826 608 aa17.58■□□□□ 0.4
CD4-208ENST00000538827 LMBR1LQ6UX01 489 aa17.58■□□□□ 0.4
CD4-208ENST00000538827 CCDC85AQ96PX6 553 aaPredicted RBP17.58■□□□□ 0.4
CD4-208ENST00000538827 APBB1O00213 710 aa17.57■□□□□ 0.4
CD4-208ENST00000538827 CAPN15O75808 1086 aa17.57■□□□□ 0.4
CD4-208ENST00000538827 HCLS1P14317 486 aaPredicted RBP17.57■□□□□ 0.4
CD4-208ENST00000538827 CTSWP56202 376 aa17.57■□□□□ 0.4
CD4-208ENST00000538827 FOXO4P98177 505 aa17.57■□□□□ 0.4
CD4-208ENST00000538827 MTX1Q13505 466 aa17.57■□□□□ 0.4
CD4-208ENST00000538827 ERFEQ4G0M1 354 aa17.57■□□□□ 0.4
CD4-208ENST00000538827 PDE8AO60658 829 aa17.56■□□□□ 0.4
CD4-208ENST00000538827 OS9Q13438 667 aaPredicted RBP17.56■□□□□ 0.4
CD4-208ENST00000538827 RABL6Q3YEC7 729 aaPredicted RBP17.56■□□□□ 0.4
CD4-208ENST00000538827 TNS4Q8IZW8 715 aa17.56■□□□□ 0.4
CD4-208ENST00000538827 SSH3Q8TE77 659 aa17.56■□□□□ 0.4
CD4-208ENST00000538827 GCC1Q96CN9 775 aa17.56■□□□□ 0.4
CD4-208ENST00000538827 PLA2G12BQ9BX93 195 aa17.56■□□□□ 0.4
CD4-208ENST00000538827 BCL11AQ9H165 835 aa17.56■□□□□ 0.4
CD4-208ENST00000538827 EXOC6BQ9Y2D4 811 aa17.56■□□□□ 0.4
CD4-208ENST00000538827 HSP90B1P14625 803 aaKnown RBP17.55■□□□□ 0.4
CD4-208ENST00000538827 POLA2Q14181 598 aa17.55■□□□□ 0.4
CD4-208ENST00000538827 FAM161AQ3B820 660 aa17.55■□□□□ 0.4
CD4-208ENST00000538827 CCDC24Q8N4L8 307 aa17.55■□□□□ 0.4
CD4-208ENST00000538827 CNBD1Q8NA66 436 aa17.55■□□□□ 0.4
CD4-208ENST00000538827 ZBTB47Q9UFB7 747 aaPredicted RBP17.55■□□□□ 0.4
CD4-208ENST00000538827 DDR1Q08345 913 aa17.54■□□□□ 0.4
CD4-208ENST00000538827 TPTE2Q6XPS3 522 aa17.54■□□□□ 0.4
CD4-208ENST00000538827 SMC5Q8IY18 1101 aa17.54■□□□□ 0.4
CD4-208ENST00000538827 NLGN1Q8N2Q7 840 aa17.54■□□□□ 0.4
CD4-208ENST00000538827 JMYQ8N9B5 988 aa17.54■□□□□ 0.4
CD4-208ENST00000538827 PDZRN3Q9UPQ7 1066 aa17.54■□□□□ 0.4
CD4-208ENST00000538827 PA2G4Q9UQ80 394 aaKnown RBP17.54■□□□□ 0.4
CD4-208ENST00000538827 NRXN2Q9P2S2 1712 aa17.54■□□□□ 0.4
CD4-208ENST00000538827 SURF6O75683 361 aaKnown RBP17.53■□□□□ 0.4
CD4-208ENST00000538827 SERPINB2P05120 415 aa17.53■□□□□ 0.4
CD4-208ENST00000538827 ST5P78524 1137 aa17.53■□□□□ 0.4
CD4-208ENST00000538827 TAF7LQ5H9L4 462 aa17.53■□□□□ 0.4
CD4-208ENST00000538827 SIL1Q9H173 461 aa17.53■□□□□ 0.4
CD4-208ENST00000538827 DCTPP1Q9H773 170 aa17.53■□□□□ 0.4
CD4-208ENST00000538827 POLRMTO00411 1230 aaKnown RBP17.52■□□□□ 0.4
CD4-208ENST00000538827 MMP10P09238 476 aa17.52■□□□□ 0.4
CD4-208ENST00000538827 TM4SF1P30408 202 aa17.52■□□□□ 0.4
CD4-208ENST00000538827 ANKRD45Q5TZF3 282 aa17.52■□□□□ 0.4
CD4-208ENST00000538827 SKAP1Q86WV1 359 aa17.52■□□□□ 0.4
CD4-208ENST00000538827 KLHDC4Q8TBB5 520 aa17.52■□□□□ 0.4
CD4-208ENST00000538827 KLRG1Q96E93 195 aa17.52■□□□□ 0.4
CD4-208ENST00000538827 ANKRD31Q8N7Z5 1873 aa17.52■□□□□ 0.39
CD4-208ENST00000538827 CCDC57Q2TAC2 916 aa17.51■□□□□ 0.39
CD4-208ENST00000538827 PRR5LQ6MZQ0 368 aa17.51■□□□□ 0.39
CD4-208ENST00000538827 TTLL11Q8NHH1 800 aa17.51■□□□□ 0.39
CD4-208ENST00000538827 GREM2Q9H772 168 aa17.51■□□□□ 0.39
CD4-208ENST00000538827 PARP3Q9Y6F1 533 aa17.51■□□□□ 0.39
CD4-208ENST00000538827 RFX5P48382 616 aaPredicted RBP17.5■□□□□ 0.39
CD4-208ENST00000538827 IFIT5Q13325 482 aaKnown RBP17.5■□□□□ 0.39
CD4-208ENST00000538827 CCDC152Q4G0S7 254 aa17.5■□□□□ 0.39
CD4-208ENST00000538827 HSP90AB4PQ58FF6 505 aa17.5■□□□□ 0.39
CD4-208ENST00000538827 LNPKQ9C0E8 428 aa17.5■□□□□ 0.39
CD4-208ENST00000538827 TAF1P21675 1872 aa17.5■□□□□ 0.39
CD4-208ENST00000538827 ANKRD18BA2A2Z9 1011 aa17.49■□□□□ 0.39
CD4-208ENST00000538827 SMARCA5O60264 1052 aaPredicted RBP17.49■□□□□ 0.39
CD4-208ENST00000538827 CSF1RP07333 972 aa17.49■□□□□ 0.39
CD4-208ENST00000538827 ITGA6P23229 1130 aa17.49■□□□□ 0.39
CD4-208ENST00000538827 RGS3P49796 1198 aa17.49■□□□□ 0.39
CD4-208ENST00000538827 NUCB1Q02818 461 aa17.49■□□□□ 0.39
CD4-208ENST00000538827 G3BP1Q13283 466 aaKnown RBP eCLIP17.49■□□□□ 0.39
CD4-208ENST00000538827 C3orf67Q6ZVT6 689 aa17.49■□□□□ 0.39
CD4-208ENST00000538827 ZNF594Q96JF6 807 aaPredicted RBP17.49■□□□□ 0.39
CD4-208ENST00000538827 RIC1Q4ADV7 1423 aa17.48■□□□□ 0.39
CD4-208ENST00000538827 COL11A2P13942 1736 aaPredicted RBP17.48■□□□□ 0.39
CD4-208ENST00000538827 PTPN12Q05209 780 aaKnown RBP17.48■□□□□ 0.39
CD4-208ENST00000538827 CHD1LQ86WJ1 897 aa17.48■□□□□ 0.39
CD4-208ENST00000538827 NLRP3Q96P20 1036 aa17.48■□□□□ 0.39
CD4-208ENST00000538827 LRRCC1Q9C099 1032 aa17.48■□□□□ 0.39
CD4-208ENST00000538827 RAB11FIP3O75154 756 aa17.47■□□□□ 0.39
CD4-208ENST00000538827 SLC10A5Q5PT55 438 aa17.47■□□□□ 0.39
CD4-208ENST00000538827 ERC1Q8IUD2 1116 aa17.47■□□□□ 0.39
CD4-208ENST00000538827 RBM46Q8TBY0 533 aaKnown RBP17.47■□□□□ 0.39
CD4-208ENST00000538827 COPRSQ9NQ92 184 aa17.47■□□□□ 0.39
CD4-208ENST00000538827 NOP58Q9Y2X3 529 aaKnown RBP17.47■□□□□ 0.39
CD4-208ENST00000538827 COL4A1P02462 1669 aa17.47■□□□□ 0.39
CD4-208ENST00000538827 A0A1B0GUL6 1792 aa17.47■□□□□ 0.39
CD4-208ENST00000538827 CACNA1SQ13698 1873 aa17.47■□□□□ 0.39
CD4-208ENST00000538827 RTL9Q8NET4 1388 aa17.46■□□□□ 0.39
CD4-208ENST00000538827 IL1RAPL2Q9NP60 686 aa17.46■□□□□ 0.39
CD4-208ENST00000538827 RHPN1Q8TCX5 695 aa17.45■□□□□ 0.38
CD4-208ENST00000538827 KIF1BPQ96EK5 621 aa17.45■□□□□ 0.38
CD4-208ENST00000538827 SEC31BQ9NQW1 1179 aa17.45■□□□□ 0.38
CD4-208ENST00000538827 EYA2O00167 538 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms