RNA–Protein interactions for RNA: ENST00000538758.1

RIMKLB-208, Transcript of ribosomal modification protein rimK like family member B, humanhuman

TSL 3

Gene RIMKLB, Length 570 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLB-208ENST00000538758 ATF7IPQ6VMQ6 1270 aa11.62□□□□□ -0.55
RIMKLB-208ENST00000538758 DDX46Q7L014 1031 aaKnown RBP11.62□□□□□ -0.55
RIMKLB-208ENST00000538758 TTLL11Q8NHH1 800 aa11.62□□□□□ -0.55
RIMKLB-208ENST00000538758 USP44Q9H0E7 712 aa11.62□□□□□ -0.55
RIMKLB-208ENST00000538758 UTRNP46939 3433 aa11.62□□□□□ -0.55
RIMKLB-208ENST00000538758 ABCC4O15439 1325 aa11.61□□□□□ -0.55
RIMKLB-208ENST00000538758 KIF16BQ96L93 1317 aa11.61□□□□□ -0.55
RIMKLB-208ENST00000538758 DDX60Q8IY21 1712 aaKnown RBP11.61□□□□□ -0.55
RIMKLB-208ENST00000538758 CSF1RP07333 972 aa11.61□□□□□ -0.55
RIMKLB-208ENST00000538758 TRIM27P14373 513 aa11.61□□□□□ -0.55
RIMKLB-208ENST00000538758 CCT4P50991 539 aaKnown RBP11.61□□□□□ -0.55
RIMKLB-208ENST00000538758 FOXO4P98177 505 aa11.61□□□□□ -0.55
RIMKLB-208ENST00000538758 ZKSCAN2Q63HK3 967 aa11.61□□□□□ -0.55
RIMKLB-208ENST00000538758 CELF1Q92879 486 aaKnown RBP11.61□□□□□ -0.55
RIMKLB-208ENST00000538758 CCDC85AQ96PX6 553 aaPredicted RBP11.61□□□□□ -0.55
RIMKLB-208ENST00000538758 SEC31BQ9NQW1 1179 aa11.61□□□□□ -0.55
RIMKLB-208ENST00000538758 UTYO14607 1347 aa11.6□□□□□ -0.55
RIMKLB-208ENST00000538758 ARFGEF1Q9Y6D6 1849 aa11.6□□□□□ -0.55
RIMKLB-208ENST00000538758 TAF1P21675 1872 aa11.6□□□□□ -0.55
RIMKLB-208ENST00000538758 LAMB2P55268 1798 aa11.6□□□□□ -0.55
RIMKLB-208ENST00000538758 CTSWP56202 376 aa11.6□□□□□ -0.55
RIMKLB-208ENST00000538758 RPS8P62241 208 aaKnown RBP11.6□□□□□ -0.55
RIMKLB-208ENST00000538758 GRAPQ13588 217 aa11.6□□□□□ -0.55
RIMKLB-208ENST00000538758 CCDC152Q4G0S7 254 aa11.6□□□□□ -0.55
RIMKLB-208ENST00000538758 EPHA10Q5JZY3 1008 aa11.6□□□□□ -0.55
RIMKLB-208ENST00000538758 INTS3Q68E01 1043 aaKnown RBP11.6□□□□□ -0.55
RIMKLB-208ENST00000538758 SLC51AQ86UW1 340 aa11.6□□□□□ -0.55
RIMKLB-208ENST00000538758 GRAPLQ8TC17 118 aaPredicted RBP11.6□□□□□ -0.55
RIMKLB-208ENST00000538758 CLUAP1Q96AJ1 413 aa11.6□□□□□ -0.55
RIMKLB-208ENST00000538758 KAZALD1Q96I82 304 aa11.6□□□□□ -0.55
RIMKLB-208ENST00000538758 RCAN3Q9UKA8 241 aa11.6□□□□□ -0.55
RIMKLB-208ENST00000538758 PPEF1O14829 653 aaPredicted RBP11.59□□□□□ -0.55
RIMKLB-208ENST00000538758 SP8Q8IXZ3 490 aa11.59□□□□□ -0.55
RIMKLB-208ENST00000538758 SUCLG2Q96I99 432 aa11.59□□□□□ -0.55
RIMKLB-208ENST00000538758 GREM2Q9H772 168 aa11.59□□□□□ -0.55
RIMKLB-208ENST00000538758 ATP6V0A2Q9Y487 856 aa11.59□□□□□ -0.55
RIMKLB-208ENST00000538758 CACNA1SQ13698 1873 aa11.58□□□□□ -0.56
RIMKLB-208ENST00000538758 NFKBIEO00221 500 aa11.58□□□□□ -0.56
RIMKLB-208ENST00000538758 PRELPP51888 382 aa11.58□□□□□ -0.56
RIMKLB-208ENST00000538758 RASSF7Q02833 373 aa11.58□□□□□ -0.56
RIMKLB-208ENST00000538758 CCDC93Q567U6 631 aa11.58□□□□□ -0.56
RIMKLB-208ENST00000538758 SOGA3Q5TF21 947 aa11.58□□□□□ -0.56
RIMKLB-208ENST00000538758 CC2D2BQ6DHV5 1058 aa11.58□□□□□ -0.56
RIMKLB-208ENST00000538758 LMBR1LQ6UX01 489 aa11.58□□□□□ -0.56
RIMKLB-208ENST00000538758 RTKN2Q8IZC4 609 aa11.58□□□□□ -0.56
RIMKLB-208ENST00000538758 PLIN1O60240 522 aa11.57□□□□□ -0.56
RIMKLB-208ENST00000538758 RLBP1P12271 317 aa11.57□□□□□ -0.56
RIMKLB-208ENST00000538758 TMEM57Q8N5G2 664 aa11.57□□□□□ -0.56
RIMKLB-208ENST00000538758 CHD4Q14839 1912 aa11.56□□□□□ -0.56
RIMKLB-208ENST00000538758 ITGA6P23229 1130 aa11.56□□□□□ -0.56
RIMKLB-208ENST00000538758 FAM161AQ3B820 660 aa11.56□□□□□ -0.56
RIMKLB-208ENST00000538758 GRIPAP1Q4V328 841 aa11.56□□□□□ -0.56
RIMKLB-208ENST00000538758 C9orf131Q5VYM1 1079 aa11.56□□□□□ -0.56
RIMKLB-208ENST00000538758 TMC4Q7Z404 712 aa11.56□□□□□ -0.56
RIMKLB-208ENST00000538758 ANKRD18AQ8IVF6 992 aa11.56□□□□□ -0.56
RIMKLB-208ENST00000538758 DZIP1LQ8IYY4 767 aaKnown RBP11.56□□□□□ -0.56
RIMKLB-208ENST00000538758 BICC1Q9H694 974 aaKnown RBP11.56□□□□□ -0.56
RIMKLB-208ENST00000538758 COL4A1P02462 1669 aa11.55□□□□□ -0.56
RIMKLB-208ENST00000538758 RTL9Q8NET4 1388 aa11.55□□□□□ -0.56
RIMKLB-208ENST00000538758 SBF1O95248 1867 aa11.55□□□□□ -0.56
RIMKLB-208ENST00000538758 MYH3P11055 1940 aa11.55□□□□□ -0.56
RIMKLB-208ENST00000538758 ANKRD18BA2A2Z9 1011 aa11.55□□□□□ -0.56
RIMKLB-208ENST00000538758 YY1P25490 414 aa11.55□□□□□ -0.56
RIMKLB-208ENST00000538758 FKBP4Q02790 459 aaKnown RBP eCLIP11.55□□□□□ -0.56
RIMKLB-208ENST00000538758 RABL6Q3YEC7 729 aaPredicted RBP11.55□□□□□ -0.56
RIMKLB-208ENST00000538758 MPNDQ8N594 471 aa11.55□□□□□ -0.56
RIMKLB-208ENST00000538758 ANKRD44Q8N8A2 993 aa11.55□□□□□ -0.56
RIMKLB-208ENST00000538758 CDC5LQ99459 802 aaKnown RBP11.55□□□□□ -0.56
RIMKLB-208ENST00000538758 PSMD1Q99460 953 aa11.55□□□□□ -0.56
RIMKLB-208ENST00000538758 MEIS3Q99687 375 aa11.55□□□□□ -0.56
RIMKLB-208ENST00000538758 TMX4Q9H1E5 349 aaPredicted RBP11.55□□□□□ -0.56
RIMKLB-208ENST00000538758 TAOK3Q9H2K8 898 aa11.55□□□□□ -0.56
RIMKLB-208ENST00000538758 BSDC1Q9NW68 430 aaPredicted RBP11.55□□□□□ -0.56
RIMKLB-208ENST00000538758 CHMP3Q9Y3E7 222 aa11.55□□□□□ -0.56
RIMKLB-208ENST00000538758 LTBP3Q9NS15 1303 aa11.55□□□□□ -0.56
RIMKLB-208ENST00000538758 FER1L6Q2WGJ9 1857 aa11.55□□□□□ -0.56
RIMKLB-208ENST00000538758 SNED1Q8TER0 1413 aa11.54□□□□□ -0.56
RIMKLB-208ENST00000538758 UBTFL1P0CB47 393 aaPredicted RBP11.54□□□□□ -0.56
RIMKLB-208ENST00000538758 LMNB1P20700 586 aa11.54□□□□□ -0.56
RIMKLB-208ENST00000538758 GPSM2P81274 684 aa11.54□□□□□ -0.56
RIMKLB-208ENST00000538758 IFIT5Q13325 482 aaKnown RBP11.54□□□□□ -0.56
RIMKLB-208ENST00000538758 FTSJ3Q8IY81 847 aaKnown RBP11.54□□□□□ -0.56
RIMKLB-208ENST00000538758 PANK1Q8TE04 598 aa11.54□□□□□ -0.56
RIMKLB-208ENST00000538758 ZNF594Q96JF6 807 aaPredicted RBP11.54□□□□□ -0.56
RIMKLB-208ENST00000538758 ZNF277Q9NRM2 450 aaPredicted RBP11.54□□□□□ -0.56
RIMKLB-208ENST00000538758 RNF181Q9P0P0 153 aa11.54□□□□□ -0.56
RIMKLB-208ENST00000538758 MINPP1Q9UNW1 487 aa11.54□□□□□ -0.56
RIMKLB-208ENST00000538758 NSFL1CQ9UNZ2 370 aaKnown RBP11.54□□□□□ -0.56
RIMKLB-208ENST00000538758 CCDC88AQ3V6T2 1871 aa11.53□□□□□ -0.56
RIMKLB-208ENST00000538758 ZBTB7BO15156 539 aaPredicted RBP11.53□□□□□ -0.56
RIMKLB-208ENST00000538758 GNAI3P08754 354 aa11.53□□□□□ -0.56
RIMKLB-208ENST00000538758 IGHMBP2P38935 993 aaKnown RBP11.53□□□□□ -0.56
RIMKLB-208ENST00000538758 CCDC57Q2TAC2 916 aa11.53□□□□□ -0.56
RIMKLB-208ENST00000538758 DPP8Q6V1X1 898 aaPredicted RBP11.53□□□□□ -0.56
RIMKLB-208ENST00000538758 RTFDC1Q9BY42 306 aaPredicted RBP11.53□□□□□ -0.56
RIMKLB-208ENST00000538758 POLLQ9UGP5 575 aa11.53□□□□□ -0.56
RIMKLB-208ENST00000538758 LRRFIP2Q9Y608 721 aaKnown RBP11.53□□□□□ -0.56
RIMKLB-208ENST00000538758 WTIPA6NIX2 430 aaPredicted RBP11.52□□□□□ -0.57
RIMKLB-208ENST00000538758 MS4A1P11836 297 aa11.52□□□□□ -0.57
RIMKLB-208ENST00000538758 IARSP41252 1262 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms