RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 KRT27Q7Z3Y8 459 aa6.64□□□□□ -1.35
LINC02408-202ENST00000538573 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.64□□□□□ -1.35
LINC02408-202ENST00000538573 SSH1Q8WYL5 1049 aa6.64□□□□□ -1.35
LINC02408-202ENST00000538573 FRAT1Q92837 279 aaPredicted RBP6.64□□□□□ -1.35
LINC02408-202ENST00000538573 ZNF428Q96B54 188 aa6.64□□□□□ -1.35
LINC02408-202ENST00000538573 FMNL2Q96PY5 1086 aa6.64□□□□□ -1.35
LINC02408-202ENST00000538573 SMC4Q9NTJ3 1288 aa6.64□□□□□ -1.35
LINC02408-202ENST00000538573 RGS17Q9UGC6 210 aaPredicted RBP6.64□□□□□ -1.35
LINC02408-202ENST00000538573 ASAP1Q9ULH1 1129 aa6.64□□□□□ -1.35
LINC02408-202ENST00000538573 MRC1P22897 1456 aa6.64□□□□□ -1.35
LINC02408-202ENST00000538573 BRWD3Q6RI45 1802 aa6.64□□□□□ -1.35
LINC02408-202ENST00000538573 BCL9O00512 1426 aa6.63□□□□□ -1.35
LINC02408-202ENST00000538573 KCNQ2O43526 872 aa6.63□□□□□ -1.35
LINC02408-202ENST00000538573 GIGYF1O75420 1035 aaPredicted RBP6.63□□□□□ -1.35
LINC02408-202ENST00000538573 NR1I2O75469 434 aa6.63□□□□□ -1.35
LINC02408-202ENST00000538573 SNRPA1P09661 255 aaKnown RBP6.63□□□□□ -1.35
LINC02408-202ENST00000538573 RRP1P56182 461 aaKnown RBP6.63□□□□□ -1.35
LINC02408-202ENST00000538573 IRX6P78412 446 aaPredicted RBP6.63□□□□□ -1.35
LINC02408-202ENST00000538573 ALDH1L2Q3SY69 923 aa6.63□□□□□ -1.35
LINC02408-202ENST00000538573 CCDC30Q5VVM6 783 aa6.63□□□□□ -1.35
LINC02408-202ENST00000538573 ZNF496Q96IT1 587 aaPredicted RBP6.63□□□□□ -1.35
LINC02408-202ENST00000538573 ATG3Q9NT62 314 aa6.63□□□□□ -1.35
LINC02408-202ENST00000538573 SOS1Q07889 1333 aaPredicted RBP6.62□□□□□ -1.35
LINC02408-202ENST00000538573 PRAMEF22A3QJZ6 481 aa6.62□□□□□ -1.35
LINC02408-202ENST00000538573 RNF223E7ERA6 249 aa6.62□□□□□ -1.35
LINC02408-202ENST00000538573 HOXB7P09629 217 aa6.62□□□□□ -1.35
LINC02408-202ENST00000538573 HDGFL1Q5TGJ6 251 aa6.62□□□□□ -1.35
LINC02408-202ENST00000538573 FAM196AQ6ZSG2 479 aa6.62□□□□□ -1.35
LINC02408-202ENST00000538573 STK31Q9BXU1 1019 aa6.62□□□□□ -1.35
LINC02408-202ENST00000538573 CHMP4AQ9BY43 222 aa6.62□□□□□ -1.35
LINC02408-202ENST00000538573 NOB1Q9ULX3 412 aaKnown RBP6.62□□□□□ -1.35
LINC02408-202ENST00000538573 HEG1Q9ULI3 1381 aa6.61□□□□□ -1.35
LINC02408-202ENST00000538573 RNF123Q5XPI4 1314 aa6.61□□□□□ -1.35
LINC02408-202ENST00000538573 IPO8O15397 1037 aaKnown RBP6.61□□□□□ -1.35
LINC02408-202ENST00000538573 HIC1Q14526 733 aa6.61□□□□□ -1.35
LINC02408-202ENST00000538573 ZKSCAN2Q63HK3 967 aa6.61□□□□□ -1.35
LINC02408-202ENST00000538573 PTF1AQ7RTS3 328 aa6.61□□□□□ -1.35
LINC02408-202ENST00000538573 PODXL2Q9NZ53 605 aa6.61□□□□□ -1.35
LINC02408-202ENST00000538573 GTF3C3Q9Y5Q9 886 aa6.61□□□□□ -1.35
LINC02408-202ENST00000538573 USP16Q9Y5T5 823 aa6.61□□□□□ -1.35
LINC02408-202ENST00000538573 SBF2Q86WG5 1849 aa6.61□□□□□ -1.35
LINC02408-202ENST00000538573 UBR2Q8IWV8 1755 aa6.61□□□□□ -1.35
LINC02408-202ENST00000538573 PAPPAQ13219 1627 aa6.61□□□□□ -1.35
LINC02408-202ENST00000538573 KIF16BQ96L93 1317 aa6.6□□□□□ -1.35
LINC02408-202ENST00000538573 PPEF1O14829 653 aaPredicted RBP6.6□□□□□ -1.35
LINC02408-202ENST00000538573 TLL1O43897 1013 aa6.6□□□□□ -1.35
LINC02408-202ENST00000538573 TRIM37O94972 964 aa6.6□□□□□ -1.35
LINC02408-202ENST00000538573 BRPF1P55201 1214 aaPredicted RBP6.6□□□□□ -1.35
LINC02408-202ENST00000538573 ANKLE1Q8NAG6 615 aa6.6□□□□□ -1.35
LINC02408-202ENST00000538573 SMARCC1Q92922 1105 aaPredicted RBP6.6□□□□□ -1.35
LINC02408-202ENST00000538573 CLUAP1Q96AJ1 413 aa6.6□□□□□ -1.35
LINC02408-202ENST00000538573 TEX13AQ9BXU3 409 aaPredicted RBP6.6□□□□□ -1.35
LINC02408-202ENST00000538573 CHPF2Q9P2E5 772 aa6.6□□□□□ -1.35
LINC02408-202ENST00000538573 DBF4Q9UBU7 674 aaPredicted RBP6.6□□□□□ -1.35
LINC02408-202ENST00000538573 C5P01031 1676 aa6.6□□□□□ -1.35
LINC02408-202ENST00000538573 CACNA1FO60840 1977 aa6.6□□□□□ -1.35
LINC02408-202ENST00000538573 KCPQ6ZWJ8 1503 aa6.6□□□□□ -1.35
LINC02408-202ENST00000538573 RGS12O14924 1447 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 PALLDQ8WX93 1383 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 NHSQ6T4R5 1651 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 LOC102724428A0A0B4J2F2 783 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 STARD3NLO95772 234 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 S1PR4O95977 384 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 ADH1BP00325 375 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 ANXA1P04083 346 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 A1BGP04217 495 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 MS4A1P11836 297 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 MYL6BP14649 208 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 ATP6V1AP38606 617 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 PIP4K2AP48426 406 aaPredicted RBP6.59□□□□□ -1.35
LINC02408-202ENST00000538573 SIK1P57059 783 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 PKDCCQ504Y2 493 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 C20orf194Q5TEA3 1177 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 ATF7IPQ6VMQ6 1270 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 G2E3Q7L622 706 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 DNAJC10Q8IXB1 793 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 FTSJ3Q8IY81 847 aaKnown RBP6.59□□□□□ -1.35
LINC02408-202ENST00000538573 DZIP1LQ8IYY4 767 aaKnown RBP6.59□□□□□ -1.35
LINC02408-202ENST00000538573 VSIG10Q8N0Z9 540 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 RDH13Q8NBN7 331 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 PANK1Q8TE04 598 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 PXYLP1Q8TE99 480 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 SLC6A16Q9GZN6 736 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 PHAXQ9H814 394 aaKnown RBP6.59□□□□□ -1.35
LINC02408-202ENST00000538573 DDX21Q9NR30 783 aaKnown RBP eCLIP6.59□□□□□ -1.35
LINC02408-202ENST00000538573 TNNQ9UQP3 1299 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 BTAF1O14981 1849 aa6.59□□□□□ -1.35
LINC02408-202ENST00000538573 SLC10A3P09131 477 aa6.58□□□□□ -1.36
LINC02408-202ENST00000538573 TRIM27P14373 513 aa6.58□□□□□ -1.36
LINC02408-202ENST00000538573 AIMP1Q12904 312 aaKnown RBP6.58□□□□□ -1.36
LINC02408-202ENST00000538573 FLIIQ13045 1269 aa6.58□□□□□ -1.36
LINC02408-202ENST00000538573 FKBP5Q13451 457 aaPredicted RBP6.58□□□□□ -1.36
LINC02408-202ENST00000538573 PDE3AQ14432 1141 aa6.58□□□□□ -1.36
LINC02408-202ENST00000538573 PROSER3Q2NL68 480 aa6.58□□□□□ -1.36
LINC02408-202ENST00000538573 SPRYD7Q5W111 196 aa6.58□□□□□ -1.36
LINC02408-202ENST00000538573 ZNF598Q86UK7 904 aaKnown RBP6.58□□□□□ -1.36
LINC02408-202ENST00000538573 ARHGAP45Q92619 1136 aa6.58□□□□□ -1.36
LINC02408-202ENST00000538573 SLC4A9Q96Q91 983 aa6.58□□□□□ -1.36
LINC02408-202ENST00000538573 CRBNQ96SW2 442 aa6.58□□□□□ -1.36
LINC02408-202ENST00000538573 API5Q9BZZ5 524 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms