RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 CASP8AP2Q9UKL3 1982 aa18.44■□□□□ 0.54
SMARCA4-206ENST00000538456 MAP2K2P36507 400 aa18.43■□□□□ 0.54
SMARCA4-206ENST00000538456 CIAPIN1Q6FI81 312 aa18.43■□□□□ 0.54
SMARCA4-206ENST00000538456 MPNDQ8N594 471 aa18.43■□□□□ 0.54
SMARCA4-206ENST00000538456 NECTIN2Q92692 538 aa18.43■□□□□ 0.54
SMARCA4-206ENST00000538456 ZNF428Q96B54 188 aa18.43■□□□□ 0.54
SMARCA4-206ENST00000538456 KIAA2012Q0VF49 1180 aa18.42■□□□□ 0.54
SMARCA4-206ENST00000538456 AIMP1Q12904 312 aaKnown RBP18.42■□□□□ 0.54
SMARCA4-206ENST00000538456 SP8Q8IXZ3 490 aa18.42■□□□□ 0.54
SMARCA4-206ENST00000538456 TRPM4Q8TD43 1214 aa18.42■□□□□ 0.54
SMARCA4-206ENST00000538456 SHTN1A0MZ66 631 aa18.41■□□□□ 0.54
SMARCA4-206ENST00000538456 BBOX1O75936 387 aa18.41■□□□□ 0.54
SMARCA4-206ENST00000538456 TNIP1Q15025 636 aa18.41■□□□□ 0.54
SMARCA4-206ENST00000538456 DDX46Q7L014 1031 aaKnown RBP18.41■□□□□ 0.54
SMARCA4-206ENST00000538456 NLRP10Q86W26 655 aa18.41■□□□□ 0.54
SMARCA4-206ENST00000538456 PNNQ9H307 717 aaKnown RBP18.41■□□□□ 0.54
SMARCA4-206ENST00000538456 DUOX1Q9NRD9 1551 aa18.41■□□□□ 0.54
SMARCA4-206ENST00000538456 CDHR2Q9BYE9 1310 aa18.41■□□□□ 0.54
SMARCA4-206ENST00000538456 HIRAP54198 1017 aaPredicted RBP18.4■□□□□ 0.54
SMARCA4-206ENST00000538456 COPS6Q7L5N1 327 aa18.4■□□□□ 0.54
SMARCA4-206ENST00000538456 XAGE3Q8WTP9 111 aa18.4■□□□□ 0.54
SMARCA4-206ENST00000538456 CFAP44Q96MT7 982 aa18.4■□□□□ 0.54
SMARCA4-206ENST00000538456 TRMT112Q9UI30 125 aaKnown RBP18.4■□□□□ 0.54
SMARCA4-206ENST00000538456 LRRC37AA6NMS7 1700 aa18.4■□□□□ 0.54
SMARCA4-206ENST00000538456 YDJCA8MPS7 323 aa18.39■□□□□ 0.53
SMARCA4-206ENST00000538456 RIPK4P57078 832 aa18.39■□□□□ 0.53
SMARCA4-206ENST00000538456 MLLT1Q03111 559 aaPredicted RBP18.39■□□□□ 0.53
SMARCA4-206ENST00000538456 GRAPQ13588 217 aa18.39■□□□□ 0.53
SMARCA4-206ENST00000538456 HSP90AB3PQ58FF7 597 aa18.39■□□□□ 0.53
SMARCA4-206ENST00000538456 GRAPLQ8TC17 118 aaPredicted RBP18.39■□□□□ 0.53
SMARCA4-206ENST00000538456 PGAP2Q9UHJ9 254 aa18.39■□□□□ 0.53
SMARCA4-206ENST00000538456 DDX60Q8IY21 1712 aaKnown RBP18.39■□□□□ 0.53
SMARCA4-206ENST00000538456 CA12O43570 354 aa18.38■□□□□ 0.53
SMARCA4-206ENST00000538456 BRPF1P55201 1214 aaPredicted RBP18.38■□□□□ 0.53
SMARCA4-206ENST00000538456 CDC37L1Q7L3B6 337 aa18.38■□□□□ 0.53
SMARCA4-206ENST00000538456 MICALL2Q8IY33 904 aa18.38■□□□□ 0.53
SMARCA4-206ENST00000538456 ZC3H15Q8WU90 426 aaKnown RBP18.38■□□□□ 0.53
SMARCA4-206ENST00000538456 CNOT7Q9UIV1 285 aaKnown RBP18.38■□□□□ 0.53
SMARCA4-206ENST00000538456 SH3TC1Q8TE82 1336 aa18.38■□□□□ 0.53
SMARCA4-206ENST00000538456 DLK2Q6UY11 383 aa18.37■□□□□ 0.53
SMARCA4-206ENST00000538456 HHIPL1Q96JK4 782 aa18.37■□□□□ 0.53
SMARCA4-206ENST00000538456 MCOLN1Q9GZU1 580 aa18.37■□□□□ 0.53
SMARCA4-206ENST00000538456 ZBTB12Q9Y330 459 aaPredicted RBP18.37■□□□□ 0.53
SMARCA4-206ENST00000538456 POLR2AP24928 1970 aaKnown RBP18.37■□□□□ 0.53
SMARCA4-206ENST00000538456 H7C1D1 291 aa18.36■□□□□ 0.53
SMARCA4-206ENST00000538456 SLC34A2O95436 690 aa18.36■□□□□ 0.53
SMARCA4-206ENST00000538456 TCIRG1Q13488 830 aa18.36■□□□□ 0.53
SMARCA4-206ENST00000538456 USP48Q86UV5 1035 aa18.36■□□□□ 0.53
SMARCA4-206ENST00000538456 HUNKP57058 714 aa18.35■□□□□ 0.53
SMARCA4-206ENST00000538456 KRT24Q2M2I5 525 aa18.35■□□□□ 0.53
SMARCA4-206ENST00000538456 ZIC5Q96T25 663 aa18.35■□□□□ 0.53
SMARCA4-206ENST00000538456 DBNDD1Q9H9R9 158 aa18.35■□□□□ 0.53
SMARCA4-206ENST00000538456 COL4A1P02462 1669 aa18.34■□□□□ 0.53
SMARCA4-206ENST00000538456 PSMD14O00487 310 aa18.34■□□□□ 0.53
SMARCA4-206ENST00000538456 TBC1D10BQ4KMP7 808 aaPredicted RBP18.34■□□□□ 0.53
SMARCA4-206ENST00000538456 SAMD7Q7Z3H4 446 aa18.34■□□□□ 0.53
SMARCA4-206ENST00000538456 RIMBP2O15034 1052 aa18.33■□□□□ 0.52
SMARCA4-206ENST00000538456 TMPOP42166 694 aaKnown RBP18.33■□□□□ 0.52
SMARCA4-206ENST00000538456 RGS19P49795 217 aa18.33■□□□□ 0.52
SMARCA4-206ENST00000538456 LMOD3Q0VAK6 560 aa18.33■□□□□ 0.52
SMARCA4-206ENST00000538456 NOGQ13253 232 aa18.33■□□□□ 0.52
SMARCA4-206ENST00000538456 DGKZQ13574 1117 aa18.33■□□□□ 0.52
SMARCA4-206ENST00000538456 WASHC4Q2M389 1173 aa18.33■□□□□ 0.52
SMARCA4-206ENST00000538456 TMC4Q7Z404 712 aa18.33■□□□□ 0.52
SMARCA4-206ENST00000538456 BABAM1Q9NWV8 329 aa18.33■□□□□ 0.52
SMARCA4-206ENST00000538456 CHPF2Q9P2E5 772 aa18.33■□□□□ 0.52
SMARCA4-206ENST00000538456 NSFL1CQ9UNZ2 370 aaKnown RBP18.33■□□□□ 0.52
SMARCA4-206ENST00000538456 EGFRP00533 1210 aa18.32■□□□□ 0.52
SMARCA4-206ENST00000538456 NEUROD2Q15784 382 aa18.32■□□□□ 0.52
SMARCA4-206ENST00000538456 KRT26Q7Z3Y9 468 aa18.32■□□□□ 0.52
SMARCA4-206ENST00000538456 CELF1Q92879 486 aaKnown RBP18.32■□□□□ 0.52
SMARCA4-206ENST00000538456 FAM89AQ96GI7 184 aa18.32■□□□□ 0.52
SMARCA4-206ENST00000538456 LAS1LQ9Y4W2 734 aaKnown RBP18.32■□□□□ 0.52
SMARCA4-206ENST00000538456 ADM5C9JUS6 153 aa18.31■□□□□ 0.52
SMARCA4-206ENST00000538456 C6orf229H3BNL8 230 aa18.31■□□□□ 0.52
SMARCA4-206ENST00000538456 RTL5Q5HYW3 569 aaPredicted RBP18.31■□□□□ 0.52
SMARCA4-206ENST00000538456 ATP5J2-PTCD1G3V325 749 aa18.3■□□□□ 0.52
SMARCA4-206ENST00000538456 GPSM2P81274 684 aa18.3■□□□□ 0.52
SMARCA4-206ENST00000538456 DOK7Q18PE1 504 aa18.3■□□□□ 0.52
SMARCA4-206ENST00000538456 RBM26Q5T8P6 1007 aaKnown RBP18.3■□□□□ 0.52
SMARCA4-206ENST00000538456 CCDC146Q8IYE0 955 aa18.3■□□□□ 0.52
SMARCA4-206ENST00000538456 DPF2Q92785 391 aa18.3■□□□□ 0.52
SMARCA4-206ENST00000538456 KCNQ5Q9NR82 932 aa18.3■□□□□ 0.52
SMARCA4-206ENST00000538456 SCN9AQ15858 1988 aa18.3■□□□□ 0.52
SMARCA4-206ENST00000538456 ECE2O60344 883 aa18.29■□□□□ 0.52
SMARCA4-206ENST00000538456 HDGFL1Q5TGJ6 251 aa18.29■□□□□ 0.52
SMARCA4-206ENST00000538456 PLBD2Q8NHP8 589 aa18.29■□□□□ 0.52
SMARCA4-206ENST00000538456 GBA2Q9HCG7 927 aaPredicted RBP18.29■□□□□ 0.52
SMARCA4-206ENST00000538456 POLLQ9UGP5 575 aa18.29■□□□□ 0.52
SMARCA4-206ENST00000538456 RTL9Q8NET4 1388 aa18.29■□□□□ 0.52
SMARCA4-206ENST00000538456 TNRC18O15417 2968 aaPredicted RBP18.28■□□□□ 0.52
SMARCA4-206ENST00000538456 AKAP11Q9UKA4 1901 aa18.28■□□□□ 0.52
SMARCA4-206ENST00000538456 FAM155AB1AL88 458 aaPredicted RBP18.28■□□□□ 0.52
SMARCA4-206ENST00000538456 RGMBQ6NW40 437 aa18.28■□□□□ 0.52
SMARCA4-206ENST00000538456 DCPSQ96C86 337 aaKnown RBP18.28■□□□□ 0.52
SMARCA4-206ENST00000538456 CHL1O00533 1208 aa18.27■□□□□ 0.52
SMARCA4-206ENST00000538456 SF3B3Q15393 1217 aaKnown RBP18.27■□□□□ 0.52
SMARCA4-206ENST00000538456 ANKRD13DQ6ZTN6 518 aa18.27■□□□□ 0.52
SMARCA4-206ENST00000538456 C2orf69Q8N8R5 385 aa18.27■□□□□ 0.52
SMARCA4-206ENST00000538456 ISCA1Q9BUE6 129 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 201.6 ms