RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 FOXD4L5Q5VV16 416 aaPredicted RBP13.7□□□□□ -0.22
SLC28A1-204ENST00000538177 USPL1Q5W0Q7 1092 aa13.7□□□□□ -0.22
SLC28A1-204ENST00000538177 ZNF589Q86UQ0 364 aaPredicted RBP13.7□□□□□ -0.22
SLC28A1-204ENST00000538177 TICAM2Q86XR7 235 aa13.7□□□□□ -0.22
SLC28A1-204ENST00000538177 FOXD4L4Q8WXT5 416 aaPredicted RBP13.7□□□□□ -0.22
SLC28A1-204ENST00000538177 SH2B1Q9NRF2 756 aaPredicted RBP13.7□□□□□ -0.22
SLC28A1-204ENST00000538177 GPT2Q8TD30 523 aa13.69□□□□□ -0.22
SLC28A1-204ENST00000538177 CHAMP1Q96JM3 812 aa13.69□□□□□ -0.22
SLC28A1-204ENST00000538177 ALDH8A1Q9H2A2 487 aaPredicted RBP13.69□□□□□ -0.22
SLC28A1-204ENST00000538177 HMG20BQ9P0W2 317 aa13.69□□□□□ -0.22
SLC28A1-204ENST00000538177 COL14A1Q05707 1796 aaKnown RBP13.69□□□□□ -0.22
SLC28A1-204ENST00000538177 PLA2G12BQ9BX93 195 aa13.69□□□□□ -0.22
SLC28A1-204ENST00000538177 LARGE1O95461 756 aa13.68□□□□□ -0.22
SLC28A1-204ENST00000538177 PCCAP05165 728 aaPredicted RBP13.68□□□□□ -0.22
SLC28A1-204ENST00000538177 KBTBD3Q8NAB2 608 aa13.68□□□□□ -0.22
SLC28A1-204ENST00000538177 LARP6Q9BRS8 491 aaKnown RBP13.68□□□□□ -0.22
SLC28A1-204ENST00000538177 FBXO3Q9UK99 471 aa13.68□□□□□ -0.22
SLC28A1-204ENST00000538177 BCL9O00512 1426 aa13.68□□□□□ -0.22
SLC28A1-204ENST00000538177 NCLP19338 710 aaKnown RBP13.68□□□□□ -0.22
SLC28A1-204ENST00000538177 LRRC24Q50LG9 513 aa13.68□□□□□ -0.22
SLC28A1-204ENST00000538177 CAVIN1Q6NZI2 390 aaKnown RBP13.68□□□□□ -0.22
SLC28A1-204ENST00000538177 KIF6Q6ZMV9 814 aa13.68□□□□□ -0.22
SLC28A1-204ENST00000538177 DNAJC2Q99543 621 aaKnown RBP13.68□□□□□ -0.22
SLC28A1-204ENST00000538177 SMC3Q9UQE7 1217 aa13.68□□□□□ -0.22
SLC28A1-204ENST00000538177 MBD3O95983 291 aa13.67□□□□□ -0.22
SLC28A1-204ENST00000538177 ZNF594Q96JF6 807 aaPredicted RBP13.67□□□□□ -0.22
SLC28A1-204ENST00000538177 NDUFB9Q9Y6M9 179 aa13.67□□□□□ -0.22
SLC28A1-204ENST00000538177 ZNF609O15014 1411 aa13.67□□□□□ -0.22
SLC28A1-204ENST00000538177 TIMM10P62072 90 aa13.66□□□□□ -0.22
SLC28A1-204ENST00000538177 ZSCAN23Q3MJ62 389 aa13.66□□□□□ -0.22
SLC28A1-204ENST00000538177 MCMDC2Q4G0Z9 681 aa13.66□□□□□ -0.22
SLC28A1-204ENST00000538177 GIGYF2Q6Y7W6 1299 aaKnown RBP13.66□□□□□ -0.22
SLC28A1-204ENST00000538177 NEUROD6Q96NK8 337 aa13.66□□□□□ -0.22
SLC28A1-204ENST00000538177 ITGB4P16144 1822 aa13.66□□□□□ -0.22
SLC28A1-204ENST00000538177 MAP3K15Q6ZN16 1313 aa13.66□□□□□ -0.22
SLC28A1-204ENST00000538177 LRP6O75581 1613 aa13.66□□□□□ -0.22
SLC28A1-204ENST00000538177 PALLDQ8WX93 1383 aa13.66□□□□□ -0.22
SLC28A1-204ENST00000538177 EXOC5O00471 708 aa13.66□□□□□ -0.22
SLC28A1-204ENST00000538177 CSF1RP07333 972 aa13.66□□□□□ -0.22
SLC28A1-204ENST00000538177 ZSCAN22P10073 491 aaPredicted RBP13.66□□□□□ -0.22
SLC28A1-204ENST00000538177 CYP19A1P11511 503 aaPredicted RBP13.66□□□□□ -0.22
SLC28A1-204ENST00000538177 SYT1P21579 422 aa13.66□□□□□ -0.22
SLC28A1-204ENST00000538177 RPS6KB1P23443 525 aa13.66□□□□□ -0.22
SLC28A1-204ENST00000538177 BLOC1S2Q6QNY1 142 aa13.66□□□□□ -0.22
SLC28A1-204ENST00000538177 CCDC83Q8IWF9 413 aa13.66□□□□□ -0.22
SLC28A1-204ENST00000538177 ZBTB38Q8NAP3 1195 aaPredicted RBP13.66□□□□□ -0.22
SLC28A1-204ENST00000538177 AHDC1Q5TGY3 1603 aaPredicted RBP13.66□□□□□ -0.22
SLC28A1-204ENST00000538177 STX6O43752 255 aa13.65□□□□□ -0.22
SLC28A1-204ENST00000538177 ST3GAL1Q11201 340 aa13.65□□□□□ -0.22
SLC28A1-204ENST00000538177 ANKRD1Q15327 319 aa13.65□□□□□ -0.22
SLC28A1-204ENST00000538177 ME3Q16798 604 aa13.65□□□□□ -0.22
SLC28A1-204ENST00000538177 CCDC57Q2TAC2 916 aa13.65□□□□□ -0.22
SLC28A1-204ENST00000538177 DDX46Q7L014 1031 aaKnown RBP13.65□□□□□ -0.22
SLC28A1-204ENST00000538177 FAM43AQ8N2R8 423 aa13.65□□□□□ -0.22
SLC28A1-204ENST00000538177 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.65□□□□□ -0.22
SLC28A1-204ENST00000538177 SLC4A9Q96Q91 983 aa13.65□□□□□ -0.22
SLC28A1-204ENST00000538177 PUS3Q9BZE2 481 aaKnown RBP13.65□□□□□ -0.22
SLC28A1-204ENST00000538177 PAG1Q9NWQ8 432 aa13.65□□□□□ -0.22
SLC28A1-204ENST00000538177 CEP126Q9P2H0 1117 aa13.65□□□□□ -0.22
SLC28A1-204ENST00000538177 TPCN1Q9ULQ1 816 aa13.65□□□□□ -0.22
SLC28A1-204ENST00000538177 ZNF330Q9Y3S2 320 aaPredicted RBP13.65□□□□□ -0.22
SLC28A1-204ENST00000538177 TAF6LQ9Y6J9 622 aa13.65□□□□□ -0.22
SLC28A1-204ENST00000538177 U3KPZ7 1027 aaPredicted RBP13.65□□□□□ -0.22
SLC28A1-204ENST00000538177 COL22A1Q8NFW1 1626 aaPredicted RBP13.65□□□□□ -0.22
SLC28A1-204ENST00000538177 SH3TC1Q8TE82 1336 aa13.65□□□□□ -0.22
SLC28A1-204ENST00000538177 KRT32Q14532 448 aa13.65□□□□□ -0.22
SLC28A1-204ENST00000538177 RTN4Q9NQC3 1192 aaKnown RBP13.65□□□□□ -0.22
SLC28A1-204ENST00000538177 A0A1B0GUL7 405 aa13.64□□□□□ -0.23
SLC28A1-204ENST00000538177 COL9A3Q14050 684 aaPredicted RBP13.64□□□□□ -0.23
SLC28A1-204ENST00000538177 TMEM87AQ8NBN3 555 aa13.64□□□□□ -0.23
SLC28A1-204ENST00000538177 FAM89AQ96GI7 184 aa13.64□□□□□ -0.23
SLC28A1-204ENST00000538177 HELLSQ9NRZ9 838 aa13.64□□□□□ -0.23
SLC28A1-204ENST00000538177 NSFL1CQ9UNZ2 370 aaKnown RBP13.64□□□□□ -0.23
SLC28A1-204ENST00000538177 CDHR2Q9BYE9 1310 aa13.64□□□□□ -0.23
SLC28A1-204ENST00000538177 PLCH1Q4KWH8 1693 aa13.64□□□□□ -0.23
SLC28A1-204ENST00000538177 GOLIM4O00461 696 aa13.64□□□□□ -0.23
SLC28A1-204ENST00000538177 CHGBP05060 677 aa13.64□□□□□ -0.23
SLC28A1-204ENST00000538177 GJB2P29033 226 aa13.64□□□□□ -0.23
SLC28A1-204ENST00000538177 HSP90AB3PQ58FF7 597 aa13.64□□□□□ -0.23
SLC28A1-204ENST00000538177 SEC62Q99442 399 aaKnown RBP13.64□□□□□ -0.23
SLC28A1-204ENST00000538177 TMEM63CQ9P1W3 806 aa13.64□□□□□ -0.23
SLC28A1-204ENST00000538177 COL16A1Q07092 1604 aaPredicted RBP13.63□□□□□ -0.23
SLC28A1-204ENST00000538177 ROBO1Q9Y6N7 1651 aa13.63□□□□□ -0.23
SLC28A1-204ENST00000538177 HLFQ16534 295 aa13.63□□□□□ -0.23
SLC28A1-204ENST00000538177 ZMYM1Q5SVZ6 1142 aa13.63□□□□□ -0.23
SLC28A1-204ENST00000538177 CCDC129Q6ZRS4 1044 aa13.63□□□□□ -0.23
SLC28A1-204ENST00000538177 NLRP10Q86W26 655 aa13.63□□□□□ -0.23
SLC28A1-204ENST00000538177 RBM27Q9P2N5 1060 aaKnown RBP13.63□□□□□ -0.23
SLC28A1-204ENST00000538177 AKAP2Q9Y2D5 859 aa13.63□□□□□ -0.23
SLC28A1-204ENST00000538177 F13A1P00488 732 aa13.62□□□□□ -0.23
SLC28A1-204ENST00000538177 IFIT1P09914 478 aaKnown RBP13.62□□□□□ -0.23
SLC28A1-204ENST00000538177 PDIA4P13667 645 aaKnown RBP13.62□□□□□ -0.23
SLC28A1-204ENST00000538177 TOB2Q14106 344 aaPredicted RBP13.62□□□□□ -0.23
SLC28A1-204ENST00000538177 USP48Q86UV5 1035 aa13.62□□□□□ -0.23
SLC28A1-204ENST00000538177 CCDC9Q9Y3X0 531 aaKnown RBP13.62□□□□□ -0.23
SLC28A1-204ENST00000538177 IFIT5Q13325 482 aaKnown RBP13.62□□□□□ -0.23
SLC28A1-204ENST00000538177 NECAB1Q8N987 351 aa13.62□□□□□ -0.23
SLC28A1-204ENST00000538177 CDCA7Q9BWT1 371 aaPredicted RBP13.62□□□□□ -0.23
SLC28A1-204ENST00000538177 MTMR6Q9Y217 621 aa13.62□□□□□ -0.23
SLC28A1-204ENST00000538177 ATP6V1DQ9Y5K8 247 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms