RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 CCDC144BQ3MJ40 725 aa16.74■□□□□ 0.27
CLPB-209ENST00000538039 CCDC144CPQ8IYA2 1237 aa16.74■□□□□ 0.27
CLPB-209ENST00000538039 FAM200AQ8TCP9 573 aa16.74■□□□□ 0.27
CLPB-209ENST00000538039 CCDC9Q9Y3X0 531 aaKnown RBP16.74■□□□□ 0.27
CLPB-209ENST00000538039 ANKARQ7Z5J8 1434 aa16.74■□□□□ 0.27
CLPB-209ENST00000538039 CEBPZQ03701 1054 aaKnown RBP16.74■□□□□ 0.27
CLPB-209ENST00000538039 MAP3K11Q16584 847 aa16.74■□□□□ 0.27
CLPB-209ENST00000538039 BLOC1S2Q6QNY1 142 aa16.74■□□□□ 0.27
CLPB-209ENST00000538039 DBNLQ9UJU6 430 aaKnown RBP16.73■□□□□ 0.27
CLPB-209ENST00000538039 CHD2O14647 1828 aaKnown RBP16.73■□□□□ 0.27
CLPB-209ENST00000538039 SPDYE4A6NLX3 237 aa16.73■□□□□ 0.27
CLPB-209ENST00000538039 G3BP1Q13283 466 aaKnown RBP eCLIP16.73■□□□□ 0.27
CLPB-209ENST00000538039 DNAJC25Q9H1X3 360 aa16.73■□□□□ 0.27
CLPB-209ENST00000538039 ESCO1Q5FWF5 840 aa16.73■□□□□ 0.27
CLPB-209ENST00000538039 PPP4R3BQ5MIZ7 849 aa16.73■□□□□ 0.27
CLPB-209ENST00000538039 LINS1Q8NG48 757 aa16.73■□□□□ 0.27
CLPB-209ENST00000538039 ERCC4Q92889 916 aaPredicted RBP16.73■□□□□ 0.27
CLPB-209ENST00000538039 SPATA32Q96LK8 384 aa16.73■□□□□ 0.27
CLPB-209ENST00000538039 UTYO14607 1347 aa16.73■□□□□ 0.27
CLPB-209ENST00000538039 STOX1Q6ZVD7 989 aa16.72■□□□□ 0.27
CLPB-209ENST00000538039 ORAI2Q96SN7 254 aa16.72■□□□□ 0.27
CLPB-209ENST00000538039 KIF3AQ9Y496 699 aa16.72■□□□□ 0.27
CLPB-209ENST00000538039 ZSCAN20P17040 1043 aaPredicted RBP16.72■□□□□ 0.27
CLPB-209ENST00000538039 TNMDQ9H2S6 317 aa16.72■□□□□ 0.27
CLPB-209ENST00000538039 PLEKHO1Q53GL0 409 aaPredicted RBP16.71■□□□□ 0.27
CLPB-209ENST00000538039 BRF1Q92994 677 aa16.71■□□□□ 0.27
CLPB-209ENST00000538039 GPATCH3Q96I76 525 aa16.71■□□□□ 0.27
CLPB-209ENST00000538039 ELP1O95163 1332 aa16.71■□□□□ 0.27
CLPB-209ENST00000538039 ZNF609O15014 1411 aa16.71■□□□□ 0.26
CLPB-209ENST00000538039 ADD1P35611 737 aaKnown RBP16.71■□□□□ 0.26
CLPB-209ENST00000538039 TFCP2Q12800 502 aa16.71■□□□□ 0.26
CLPB-209ENST00000538039 RESTQ13127 1097 aa16.71■□□□□ 0.26
CLPB-209ENST00000538039 JCADQ9P266 1359 aa16.7■□□□□ 0.26
CLPB-209ENST00000538039 NEURL1BA8MQ27 555 aa16.7■□□□□ 0.26
CLPB-209ENST00000538039 CYP21A2P08686 494 aa16.7■□□□□ 0.26
CLPB-209ENST00000538039 PSME1Q06323 249 aa16.7■□□□□ 0.26
CLPB-209ENST00000538039 RBM43Q6ZSC3 357 aaKnown RBP16.7■□□□□ 0.26
CLPB-209ENST00000538039 PLA2G4DQ86XP0 818 aa16.7■□□□□ 0.26
CLPB-209ENST00000538039 ERC1Q8IUD2 1116 aa16.7■□□□□ 0.26
CLPB-209ENST00000538039 CACTINQ8WUQ7 758 aaKnown RBP16.7■□□□□ 0.26
CLPB-209ENST00000538039 ZHX1Q9UKY1 873 aaPredicted RBP16.7■□□□□ 0.26
CLPB-209ENST00000538039 GCP02774 474 aa16.7■□□□□ 0.26
CLPB-209ENST00000538039 C11orf57Q6ZUT1 292 aaPredicted RBP16.7■□□□□ 0.26
CLPB-209ENST00000538039 C16orf45Q96MC5 204 aaPredicted RBP16.7■□□□□ 0.26
CLPB-209ENST00000538039 RFX5P48382 616 aaPredicted RBP16.69■□□□□ 0.26
CLPB-209ENST00000538039 SCRN1Q12765 414 aa16.69■□□□□ 0.26
CLPB-209ENST00000538039 Q6ZUG5 572 aa16.69■□□□□ 0.26
CLPB-209ENST00000538039 XAGE3Q8WTP9 111 aa16.69■□□□□ 0.26
CLPB-209ENST00000538039 GOLPH3LQ9H4A5 285 aa16.69■□□□□ 0.26
CLPB-209ENST00000538039 CLSTN2Q9H4D0 955 aa16.69■□□□□ 0.26
CLPB-209ENST00000538039 CTDNEP1O95476 244 aa16.69■□□□□ 0.26
CLPB-209ENST00000538039 U2AF2P26368 475 aaKnown RBP eCLIP16.69■□□□□ 0.26
CLPB-209ENST00000538039 ZNF75DP51815 510 aa16.69■□□□□ 0.26
CLPB-209ENST00000538039 COPS6Q7L5N1 327 aa16.69■□□□□ 0.26
CLPB-209ENST00000538039 ANKRD24Q8TF21 1146 aa16.69■□□□□ 0.26
CLPB-209ENST00000538039 MYD88Q99836 296 aa16.69■□□□□ 0.26
CLPB-209ENST00000538039 USP27XA6NNY8 438 aa16.68■□□□□ 0.26
CLPB-209ENST00000538039 C1orf141Q5JVX7 400 aa16.68■□□□□ 0.26
CLPB-209ENST00000538039 USPL1Q5W0Q7 1092 aa16.68■□□□□ 0.26
CLPB-209ENST00000538039 ARHGEF25Q86VW2 580 aa16.68■□□□□ 0.26
CLPB-209ENST00000538039 GTF3C6Q969F1 213 aa16.68■□□□□ 0.26
CLPB-209ENST00000538039 DBNDD2Q9BQY9 259 aa16.68■□□□□ 0.26
CLPB-209ENST00000538039 DDX21Q9NR30 783 aaKnown RBP eCLIP16.68■□□□□ 0.26
CLPB-209ENST00000538039 C5P01031 1676 aa16.68■□□□□ 0.26
CLPB-209ENST00000538039 PSMA5P28066 241 aa16.68■□□□□ 0.26
CLPB-209ENST00000538039 PTPN12Q05209 780 aaKnown RBP16.68■□□□□ 0.26
CLPB-209ENST00000538039 GCKRQ14397 625 aa16.68■□□□□ 0.26
CLPB-209ENST00000538039 ZSCAN25Q6NSZ9 544 aa16.68■□□□□ 0.26
CLPB-209ENST00000538039 LRP10Q7Z4F1 713 aa16.68■□□□□ 0.26
CLPB-209ENST00000538039 RIC3Q7Z5B4 369 aa16.68■□□□□ 0.26
CLPB-209ENST00000538039 THEMISQ8N1K5 641 aaPredicted RBP16.68■□□□□ 0.26
CLPB-209ENST00000538039 LMOD2Q6P5Q4 547 aa16.68■□□□□ 0.26
CLPB-209ENST00000538039 DDX46Q7L014 1031 aaKnown RBP16.68■□□□□ 0.26
CLPB-209ENST00000538039 IGSF3O75054 1194 aa16.67■□□□□ 0.26
CLPB-209ENST00000538039 DNAJC2Q99543 621 aaKnown RBP16.67■□□□□ 0.26
CLPB-209ENST00000538039 TRIM5Q9C035 493 aa16.67■□□□□ 0.26
CLPB-209ENST00000538039 SIPA1L3O60292 1781 aaPredicted RBP16.67■□□□□ 0.26
CLPB-209ENST00000538039 ATP5J2-PTCD1G3V325 749 aa16.67■□□□□ 0.26
CLPB-209ENST00000538039 PTCD1O75127 700 aaKnown RBP16.67■□□□□ 0.26
CLPB-209ENST00000538039 TSGA10IPQ3SY00 556 aa16.67■□□□□ 0.26
CLPB-209ENST00000538039 SMAP1Q8IYB5 467 aaPredicted RBP16.67■□□□□ 0.26
CLPB-209ENST00000538039 NFATC2IPQ8NCF5 419 aa16.67■□□□□ 0.26
CLPB-209ENST00000538039 CTIFO43310 598 aaKnown RBP16.66■□□□□ 0.26
CLPB-209ENST00000538039 ZNF165P49910 485 aa16.66■□□□□ 0.26
CLPB-209ENST00000538039 CHST3Q7LGC8 479 aa16.66■□□□□ 0.26
CLPB-209ENST00000538039 MTERF4Q7Z6M4 381 aaKnown RBP16.66■□□□□ 0.26
CLPB-209ENST00000538039 ANKRD7Q92527 254 aa16.66■□□□□ 0.26
CLPB-209ENST00000538039 NCOA5Q9HCD5 579 aaKnown RBP16.66■□□□□ 0.26
CLPB-209ENST00000538039 RGPD5Q99666 1765 aa16.66■□□□□ 0.26
CLPB-209ENST00000538039 IQCB1Q15051 598 aa16.66■□□□□ 0.26
CLPB-209ENST00000538039 ALDH8A1Q9H2A2 487 aaPredicted RBP16.66■□□□□ 0.26
CLPB-209ENST00000538039 NPHP3Q7Z494 1330 aa16.66■□□□□ 0.26
CLPB-209ENST00000538039 TNNI3KQ59H18 835 aa16.66■□□□□ 0.26
CLPB-209ENST00000538039 BICD2Q8TD16 824 aa16.66■□□□□ 0.26
CLPB-209ENST00000538039 NEK1Q96PY6 1258 aa16.66■□□□□ 0.26
CLPB-209ENST00000538039 FPGT-TNNI3KV9GXZ4 949 aa16.66■□□□□ 0.26
CLPB-209ENST00000538039 NCBP1Q09161 790 aaKnown RBP16.65■□□□□ 0.26
CLPB-209ENST00000538039 ILDR1Q86SU0 546 aaPredicted RBP16.65■□□□□ 0.26
CLPB-209ENST00000538039 DRC7Q8IY82 874 aa16.65■□□□□ 0.26
CLPB-209ENST00000538039 TDRD7Q8NHU6 1098 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms