RNA–Protein interactions for RNA: ENST00000537757.5

LMO3-217, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-217ENST00000537757 CEP85Q6P2H3 762 aa15.46■□□□□ 0.07
LMO3-217ENST00000537757 SIRT2Q8IXJ6 389 aa15.46■□□□□ 0.07
LMO3-217ENST00000537757 C1orf115Q9H7X2 142 aa15.46■□□□□ 0.07
LMO3-217ENST00000537757 PCDHB15Q9Y5E8 787 aa15.46■□□□□ 0.07
LMO3-217ENST00000537757 SRGNP10124 158 aa15.45■□□□□ 0.06
LMO3-217ENST00000537757 RFX5P48382 616 aaPredicted RBP15.45■□□□□ 0.06
LMO3-217ENST00000537757 POLA2Q14181 598 aa15.45■□□□□ 0.06
LMO3-217ENST00000537757 CCDC152Q4G0S7 254 aa15.45■□□□□ 0.06
LMO3-217ENST00000537757 SSH3Q8TE77 659 aa15.45■□□□□ 0.06
LMO3-217ENST00000537757 NEFLP07196 543 aa15.44■□□□□ 0.06
LMO3-217ENST00000537757 KCNA3P22001 575 aa15.44■□□□□ 0.06
LMO3-217ENST00000537757 CRAMP1Q96RY5 1269 aa15.44■□□□□ 0.06
LMO3-217ENST00000537757 GREM2Q9H772 168 aa15.44■□□□□ 0.06
LMO3-217ENST00000537757 PNMA6EA0A0J9YXQ4 647 aa15.43■□□□□ 0.06
LMO3-217ENST00000537757 H0YIN7 160 aa15.43■□□□□ 0.06
LMO3-217ENST00000537757 NPR1P16066 1061 aa15.43■□□□□ 0.06
LMO3-217ENST00000537757 AFDNP55196 1824 aaKnown RBP15.43■□□□□ 0.06
LMO3-217ENST00000537757 ITGA6P23229 1130 aa15.42■□□□□ 0.06
LMO3-217ENST00000537757 FAM161AQ3B820 660 aa15.42■□□□□ 0.06
LMO3-217ENST00000537757 STYK1Q6J9G0 422 aa15.42■□□□□ 0.06
LMO3-217ENST00000537757 C2CD5Q86YS7 1000 aa15.42■□□□□ 0.06
LMO3-217ENST00000537757 MASTLQ96GX5 879 aa15.42■□□□□ 0.06
LMO3-217ENST00000537757 SEC31BQ9NQW1 1179 aa15.42■□□□□ 0.06
LMO3-217ENST00000537757 SRGAP3O43295 1099 aa15.41■□□□□ 0.06
LMO3-217ENST00000537757 PTPN12Q05209 780 aaKnown RBP15.41■□□□□ 0.06
LMO3-217ENST00000537757 IFIT5Q13325 482 aaKnown RBP15.41■□□□□ 0.06
LMO3-217ENST00000537757 HDAC1Q13547 482 aaPredicted RBP15.41■□□□□ 0.06
LMO3-217ENST00000537757 DDX46Q7L014 1031 aaKnown RBP15.41■□□□□ 0.06
LMO3-217ENST00000537757 RBM17Q96I25 401 aaKnown RBP15.41■□□□□ 0.06
LMO3-217ENST00000537757 COPRSQ9NQ92 184 aa15.41■□□□□ 0.06
LMO3-217ENST00000537757 DDX60Q8IY21 1712 aaKnown RBP15.4■□□□□ 0.06
LMO3-217ENST00000537757 ANKRD18BA2A2Z9 1011 aa15.4■□□□□ 0.06
LMO3-217ENST00000537757 BBOX1O75936 387 aa15.4■□□□□ 0.06
LMO3-217ENST00000537757 DPEP1P16444 411 aa15.4■□□□□ 0.06
LMO3-217ENST00000537757 CHRNA5P30532 468 aa15.4■□□□□ 0.06
LMO3-217ENST00000537757 ALDH1B1P30837 517 aa15.4■□□□□ 0.06
LMO3-217ENST00000537757 CCDC57Q2TAC2 916 aa15.4■□□□□ 0.06
LMO3-217ENST00000537757 RPGRQ92834 1020 aaKnown RBP15.4■□□□□ 0.06
LMO3-217ENST00000537757 CCDC85AQ96PX6 553 aaPredicted RBP15.4■□□□□ 0.06
LMO3-217ENST00000537757 NOP58Q9Y2X3 529 aaKnown RBP15.4■□□□□ 0.06
LMO3-217ENST00000537757 A0A0G2JLW4 131 aa15.39■□□□□ 0.05
LMO3-217ENST00000537757 HMMRO75330 724 aa15.39■□□□□ 0.05
LMO3-217ENST00000537757 RPS8P62241 208 aaKnown RBP15.39■□□□□ 0.05
LMO3-217ENST00000537757 GRAPQ13588 217 aa15.39■□□□□ 0.05
LMO3-217ENST00000537757 GRAPLQ8TC17 118 aaPredicted RBP15.39■□□□□ 0.05
LMO3-217ENST00000537757 CELF1Q92879 486 aaKnown RBP15.39■□□□□ 0.05
LMO3-217ENST00000537757 CDC5LQ99459 802 aaKnown RBP15.39■□□□□ 0.05
LMO3-217ENST00000537757 FHDC1Q9C0D6 1143 aaPredicted RBP15.39■□□□□ 0.05
LMO3-217ENST00000537757 FBXO3Q9UK99 471 aa15.39■□□□□ 0.05
LMO3-217ENST00000537757 TNRC6CQ9HCJ0 1690 aaKnown RBP15.38■□□□□ 0.05
LMO3-217ENST00000537757 GOLGB1Q14789 3259 aaKnown RBP15.38■□□□□ 0.05
LMO3-217ENST00000537757 CNKSR1Q969H4 720 aa15.38■□□□□ 0.05
LMO3-217ENST00000537757 SYT17Q9BSW7 474 aa15.38■□□□□ 0.05
LMO3-217ENST00000537757 BSDC1Q9NW68 430 aaPredicted RBP15.38■□□□□ 0.05
LMO3-217ENST00000537757 CHMP3Q9Y3E7 222 aa15.38■□□□□ 0.05
LMO3-217ENST00000537757 LAMB2P55268 1798 aa15.38■□□□□ 0.05
LMO3-217ENST00000537757 ANKRD31Q8N7Z5 1873 aa15.37■□□□□ 0.05
LMO3-217ENST00000537757 CIAO1O76071 339 aa15.37■□□□□ 0.05
LMO3-217ENST00000537757 TMC4Q7Z404 712 aa15.37■□□□□ 0.05
LMO3-217ENST00000537757 ANKRD18AQ8IVF6 992 aa15.37■□□□□ 0.05
LMO3-217ENST00000537757 C7orf43Q8WVR3 580 aa15.37■□□□□ 0.05
LMO3-217ENST00000537757 ZNF594Q96JF6 807 aaPredicted RBP15.37■□□□□ 0.05
LMO3-217ENST00000537757 DCTPP1Q9H773 170 aa15.37■□□□□ 0.05
LMO3-217ENST00000537757 RIPOR2Q9Y4F9 1068 aa15.37■□□□□ 0.05
LMO3-217ENST00000537757 KIF13BQ9NQT8 1826 aa15.37■□□□□ 0.05
LMO3-217ENST00000537757 IGHDP01880 384 aa15.36■□□□□ 0.05
LMO3-217ENST00000537757 ATG9AQ7Z3C6 839 aa15.36■□□□□ 0.05
LMO3-217ENST00000537757 TTLL6Q8N841 843 aa15.36■□□□□ 0.05
LMO3-217ENST00000537757 NLGN2Q8NFZ4 835 aa15.36■□□□□ 0.05
LMO3-217ENST00000537757 KLHDC4Q8TBB5 520 aa15.36■□□□□ 0.05
LMO3-217ENST00000537757 ZNF622Q969S3 477 aaKnown RBP eCLIP15.36■□□□□ 0.05
LMO3-217ENST00000537757 RWDD1Q9H446 243 aaPredicted RBP15.36■□□□□ 0.05
LMO3-217ENST00000537757 PIM2Q9P1W9 311 aa15.36■□□□□ 0.05
LMO3-217ENST00000537757 PPP1R1BQ9UD71 204 aaPredicted RBP15.36■□□□□ 0.05
LMO3-217ENST00000537757 PA2G4Q9UQ80 394 aaKnown RBP15.36■□□□□ 0.05
LMO3-217ENST00000537757 EYA2O00167 538 aa15.35■□□□□ 0.05
LMO3-217ENST00000537757 IGHMBP2P38935 993 aaKnown RBP15.35■□□□□ 0.05
LMO3-217ENST00000537757 LDHAL6AQ6ZMR3 332 aa15.35■□□□□ 0.05
LMO3-217ENST00000537757 SP8Q8IXZ3 490 aa15.35■□□□□ 0.05
LMO3-217ENST00000537757 PUS3Q9BZE2 481 aaKnown RBP15.35■□□□□ 0.05
LMO3-217ENST00000537757 LRRC24Q50LG9 513 aa15.34■□□□□ 0.05
LMO3-217ENST00000537757 PRPF40BQ6NWY9 871 aaKnown RBP15.34■□□□□ 0.05
LMO3-217ENST00000537757 MPHOSPH8Q99549 860 aa15.34■□□□□ 0.05
LMO3-217ENST00000537757 PPP4R2Q9NY27 417 aa15.34■□□□□ 0.05
LMO3-217ENST00000537757 MINPP1Q9UNW1 487 aa15.34■□□□□ 0.05
LMO3-217ENST00000537757 ATP6V0A2Q9Y487 856 aa15.34■□□□□ 0.05
LMO3-217ENST00000537757 LRP5O75197 1615 aa15.33■□□□□ 0.04
LMO3-217ENST00000537757 COL4A1P02462 1669 aa15.33■□□□□ 0.04
LMO3-217ENST00000537757 SURF6O75683 361 aaKnown RBP15.33■□□□□ 0.04
LMO3-217ENST00000537757 IL15P40933 162 aaPredicted RBP15.33■□□□□ 0.04
LMO3-217ENST00000537757 HSP90AB4PQ58FF6 505 aa15.33■□□□□ 0.04
LMO3-217ENST00000537757 DALRD3Q5D0E6 543 aaKnown RBP15.33■□□□□ 0.04
LMO3-217ENST00000537757 TAF7LQ5H9L4 462 aa15.33■□□□□ 0.04
LMO3-217ENST00000537757 KIAA1551Q9HCM1 1747 aa15.32■□□□□ 0.04
LMO3-217ENST00000537757 PPEF1O14829 653 aaPredicted RBP15.32■□□□□ 0.04
LMO3-217ENST00000537757 RAB11FIP3O75154 756 aa15.32■□□□□ 0.04
LMO3-217ENST00000537757 G3BP1Q13283 466 aaKnown RBP eCLIP15.32■□□□□ 0.04
LMO3-217ENST00000537757 CC2D2BQ6DHV5 1058 aa15.32■□□□□ 0.04
LMO3-217ENST00000537757 SMC5Q8IY18 1101 aa15.32■□□□□ 0.04
LMO3-217ENST00000537757 KLHL34Q8N239 644 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms