RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-208ENST00000537607 TOP1P11387 765 aaKnown RBP14.21□□□□□ -0.13
CIT-208ENST00000537607 KIAA1328Q86T90 577 aa14.21□□□□□ -0.13
CIT-208ENST00000537607 SMARCC1Q92922 1105 aaPredicted RBP14.21□□□□□ -0.13
CIT-208ENST00000537607 UBA5Q9GZZ9 404 aa14.21□□□□□ -0.13
CIT-208ENST00000537607 TTC41PQ6P2S7 1318 aa14.21□□□□□ -0.14
CIT-208ENST00000537607 RDXP35241 583 aaKnown RBP14.21□□□□□ -0.14
CIT-208ENST00000537607 BICC1Q9H694 974 aaKnown RBP14.21□□□□□ -0.14
CIT-208ENST00000537607 TFCP2Q12800 502 aa14.2□□□□□ -0.14
CIT-208ENST00000537607 Q6ZUG5 572 aa14.2□□□□□ -0.14
CIT-208ENST00000537607 EDC4Q6P2E9 1401 aaKnown RBP14.2□□□□□ -0.14
CIT-208ENST00000537607 TMEM266Q2M3C6 531 aa14.2□□□□□ -0.14
CIT-208ENST00000537607 GIMAP6Q6P9H5 292 aa14.2□□□□□ -0.14
CIT-208ENST00000537607 TXLNBQ8N3L3 684 aa14.2□□□□□ -0.14
CIT-208ENST00000537607 LGR6Q9HBX8 967 aa14.2□□□□□ -0.14
CIT-208ENST00000537607 FBXO3Q9UK99 471 aa14.2□□□□□ -0.14
CIT-208ENST00000537607 IRS4O14654 1257 aaPredicted RBP14.2□□□□□ -0.14
CIT-208ENST00000537607 HCLS1P14317 486 aaPredicted RBP14.2□□□□□ -0.14
CIT-208ENST00000537607 MAST1Q9Y2H9 1570 aa14.2□□□□□ -0.14
CIT-208ENST00000537607 IDEP14735 1019 aa14.2□□□□□ -0.14
CIT-208ENST00000537607 ZNF790Q6PG37 636 aa14.2□□□□□ -0.14
CIT-208ENST00000537607 UTP14AQ9BVJ6 771 aaKnown RBP14.2□□□□□ -0.14
CIT-208ENST00000537607 CHL1O00533 1208 aa14.19□□□□□ -0.14
CIT-208ENST00000537607 PTPN14Q15678 1187 aa14.19□□□□□ -0.14
CIT-208ENST00000537607 OTUD7AQ8TE49 926 aaPredicted RBP14.19□□□□□ -0.14
CIT-208ENST00000537607 CPLX3Q8WVH0 158 aa14.19□□□□□ -0.14
CIT-208ENST00000537607 ZSCAN16Q9H4T2 348 aaPredicted RBP14.19□□□□□ -0.14
CIT-208ENST00000537607 CNPY2Q9Y2B0 182 aa14.19□□□□□ -0.14
CIT-208ENST00000537607 CFAP65Q6ZU64 1925 aaKnown RBP14.19□□□□□ -0.14
CIT-208ENST00000537607 UBA7P41226 1012 aa14.19□□□□□ -0.14
CIT-208ENST00000537607 NAA16Q6N069 864 aaPredicted RBP14.19□□□□□ -0.14
CIT-208ENST00000537607 CHST3Q7LGC8 479 aa14.19□□□□□ -0.14
CIT-208ENST00000537607 BTG4Q9NY30 223 aa14.19□□□□□ -0.14
CIT-208ENST00000537607 SBNO1A3KN83 1393 aa14.19□□□□□ -0.14
CIT-208ENST00000537607 ATP10AO60312 1499 aa14.19□□□□□ -0.14
CIT-208ENST00000537607 CHMLP26374 656 aa14.19□□□□□ -0.14
CIT-208ENST00000537607 ESR2Q92731 530 aa14.19□□□□□ -0.14
CIT-208ENST00000537607 ALG1Q9BT22 464 aa14.19□□□□□ -0.14
CIT-208ENST00000537607 MATR3P43243 847 aaKnown RBP eCLIP14.18□□□□□ -0.14
CIT-208ENST00000537607 TRMT1LQ7Z2T5 733 aaKnown RBP14.18□□□□□ -0.14
CIT-208ENST00000537607 SNX21Q969T3 373 aa14.18□□□□□ -0.14
CIT-208ENST00000537607 PTPRTO14522 1441 aa14.18□□□□□ -0.14
CIT-208ENST00000537607 ST5P78524 1137 aa14.18□□□□□ -0.14
CIT-208ENST00000537607 TNIP1Q15025 636 aa14.18□□□□□ -0.14
CIT-208ENST00000537607 UBXN4Q92575 508 aa14.18□□□□□ -0.14
CIT-208ENST00000537607 FEZ1Q99689 392 aa14.18□□□□□ -0.14
CIT-208ENST00000537607 TCP11L1Q9NUJ3 509 aa14.18□□□□□ -0.14
CIT-208ENST00000537607 F8W031 263 aaPredicted RBP14.18□□□□□ -0.14
CIT-208ENST00000537607 PPP1R12BO60237 982 aaPredicted RBP14.18□□□□□ -0.14
CIT-208ENST00000537607 FAM89AQ96GI7 184 aa14.18□□□□□ -0.14
CIT-208ENST00000537607 KRT23Q9C075 422 aa14.18□□□□□ -0.14
CIT-208ENST00000537607 CCDC102BQ68D86 513 aa14.17□□□□□ -0.14
CIT-208ENST00000537607 ZNF397Q8NF99 534 aaPredicted RBP14.17□□□□□ -0.14
CIT-208ENST00000537607 CUL5Q93034 780 aa14.17□□□□□ -0.14
CIT-208ENST00000537607 ADCY5O95622 1261 aa14.17□□□□□ -0.14
CIT-208ENST00000537607 HLA-DOAP06340 250 aa14.17□□□□□ -0.14
CIT-208ENST00000537607 RBM25P49756 843 aaKnown RBP14.17□□□□□ -0.14
CIT-208ENST00000537607 FKBP15Q5T1M5 1219 aa14.17□□□□□ -0.14
CIT-208ENST00000537607 CCDC12Q8WUD4 166 aaPredicted RBP14.17□□□□□ -0.14
CIT-208ENST00000537607 AK2P54819 239 aa14.17□□□□□ -0.14
CIT-208ENST00000537607 TIMM10P62072 90 aa14.17□□□□□ -0.14
CIT-208ENST00000537607 ENOX2Q16206 610 aaKnown RBP14.17□□□□□ -0.14
CIT-208ENST00000537607 STX1AQ16623 288 aa14.17□□□□□ -0.14
CIT-208ENST00000537607 ZSCAN23Q3MJ62 389 aa14.17□□□□□ -0.14
CIT-208ENST00000537607 KLHDC4Q8TBB5 520 aa14.17□□□□□ -0.14
CIT-208ENST00000537607 TRMT1Q9NXH9 659 aaKnown RBP14.17□□□□□ -0.14
CIT-208ENST00000537607 PCDH11XQ9BZA7 1347 aa14.17□□□□□ -0.14
CIT-208ENST00000537607 PCDH11YQ9BZA8 1340 aa14.17□□□□□ -0.14
CIT-208ENST00000537607 PRC1O43663 620 aa14.16□□□□□ -0.14
CIT-208ENST00000537607 ERLIN1O75477 346 aa14.16□□□□□ -0.14
CIT-208ENST00000537607 WDR78Q5VTH9 848 aa14.16□□□□□ -0.14
CIT-208ENST00000537607 CACNA2D4Q7Z3S7 1137 aa14.16□□□□□ -0.14
CIT-208ENST00000537607 ZGPATQ8N5A5 531 aaKnown RBP14.16□□□□□ -0.14
CIT-208ENST00000537607 SBNO2Q9Y2G9 1366 aa14.16□□□□□ -0.14
CIT-208ENST00000537607 MAGI3Q5TCQ9 1506 aa14.16□□□□□ -0.14
CIT-208ENST00000537607 DNM1Q05193 864 aaKnown RBP14.16□□□□□ -0.14
CIT-208ENST00000537607 CEP170Q5SW79 1584 aa14.16□□□□□ -0.14
CIT-208ENST00000537607 ABCA5Q8WWZ7 1642 aa14.16□□□□□ -0.14
CIT-208ENST00000537607 RTN1Q16799 776 aa14.16□□□□□ -0.14
CIT-208ENST00000537607 IFIT1BQ5T764 474 aaKnown RBP14.16□□□□□ -0.14
CIT-208ENST00000537607 CREB3L3Q68CJ9 461 aa14.16□□□□□ -0.14
CIT-208ENST00000537607 TPTE2Q6XPS3 522 aa14.16□□□□□ -0.14
CIT-208ENST00000537607 USP48Q86UV5 1035 aa14.16□□□□□ -0.14
CIT-208ENST00000537607 MIGA1Q8NAN2 632 aa14.16□□□□□ -0.14
CIT-208ENST00000537607 CNNM2Q9H8M5 875 aa14.16□□□□□ -0.14
CIT-208ENST00000537607 CABP5Q9NP86 173 aa14.16□□□□□ -0.14
CIT-208ENST00000537607 NSFL1CQ9UNZ2 370 aaKnown RBP14.16□□□□□ -0.14
CIT-208ENST00000537607 RNF113AO15541 343 aaKnown RBP14.15□□□□□ -0.14
CIT-208ENST00000537607 ERLIN2O94905 339 aa14.15□□□□□ -0.14
CIT-208ENST00000537607 PAF1Q8N7H5 531 aa14.15□□□□□ -0.14
CIT-208ENST00000537607 TSG101Q99816 390 aa14.15□□□□□ -0.14
CIT-208ENST00000537607 TSPY3P0CV98 308 aa14.15□□□□□ -0.14
CIT-208ENST00000537607 TSPY8P0CW00 308 aa14.15□□□□□ -0.14
CIT-208ENST00000537607 TMTC2Q8N394 836 aa14.15□□□□□ -0.14
CIT-208ENST00000537607 ZSCAN12O43309 604 aa14.15□□□□□ -0.14
CIT-208ENST00000537607 SPA17Q15506 151 aa14.15□□□□□ -0.14
CIT-208ENST00000537607 URI1O94763 535 aaPredicted RBP14.15□□□□□ -0.14
CIT-208ENST00000537607 CPA1P15085 419 aa14.15□□□□□ -0.14
CIT-208ENST00000537607 TMC6Q7Z403 805 aa14.15□□□□□ -0.14
CIT-208ENST00000537607 DDX17Q92841 729 aaKnown RBP14.15□□□□□ -0.14
CIT-208ENST00000537607 F13A1P00488 732 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms