RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 VTI1AQ96AJ9 217 aa8.9□□□□□ -0.98
SRGAP1-203ENST00000537585 TNFRSF10BO14763 440 aa8.89□□□□□ -0.99
SRGAP1-203ENST00000537585 LILRB5O75023 590 aa8.89□□□□□ -0.99
SRGAP1-203ENST00000537585 SHISA2Q6UWI4 295 aa8.89□□□□□ -0.99
SRGAP1-203ENST00000537585 HFE2Q6ZVN8 426 aa8.89□□□□□ -0.99
SRGAP1-203ENST00000537585 RTCBQ9Y3I0 505 aaKnown RBP8.89□□□□□ -0.99
SRGAP1-203ENST00000537585 ELOAQ14241 798 aaKnown RBP8.88□□□□□ -0.99
SRGAP1-203ENST00000537585 NAA30Q147X3 362 aaPredicted RBP8.88□□□□□ -0.99
SRGAP1-203ENST00000537585 TRIP4Q15650 581 aaPredicted RBP8.88□□□□□ -0.99
SRGAP1-203ENST00000537585 GRIK5Q16478 980 aa8.88□□□□□ -0.99
SRGAP1-203ENST00000537585 PRRT3Q5FWE3 981 aa8.88□□□□□ -0.99
SRGAP1-203ENST00000537585 PERM1Q5SV97 790 aa8.88□□□□□ -0.99
SRGAP1-203ENST00000537585 DHX32Q7L7V1 743 aaKnown RBP8.88□□□□□ -0.99
SRGAP1-203ENST00000537585 FAM35AQ86V20 835 aa8.88□□□□□ -0.99
SRGAP1-203ENST00000537585 LPIN3Q9BQK8 851 aa8.88□□□□□ -0.99
SRGAP1-203ENST00000537585 KCNMB2Q9Y691 235 aa8.88□□□□□ -0.99
SRGAP1-203ENST00000537585 A0A0A0MRY4 1105 aa8.87□□□□□ -0.99
SRGAP1-203ENST00000537585 RARAP10276 462 aa8.87□□□□□ -0.99
SRGAP1-203ENST00000537585 SELPP16109 830 aa8.87□□□□□ -0.99
SRGAP1-203ENST00000537585 SCNN1AP37088 669 aa8.87□□□□□ -0.99
SRGAP1-203ENST00000537585 SWI5Q1ZZU3 235 aa8.87□□□□□ -0.99
SRGAP1-203ENST00000537585 TRAPPC3LQ5T215 181 aa8.87□□□□□ -0.99
SRGAP1-203ENST00000537585 ILDR2Q71H61 639 aa8.87□□□□□ -0.99
SRGAP1-203ENST00000537585 ZMYND15Q9H091 742 aa8.87□□□□□ -0.99
SRGAP1-203ENST00000537585 TPSG1Q9NRR2 321 aa8.87□□□□□ -0.99
SRGAP1-203ENST00000537585 GATA4P43694 442 aa8.86□□□□□ -0.99
SRGAP1-203ENST00000537585 DMRTC2Q8IXT2 367 aaPredicted RBP8.86□□□□□ -0.99
SRGAP1-203ENST00000537585 CXXC1Q9P0U4 656 aaPredicted RBP8.86□□□□□ -0.99
SRGAP1-203ENST00000537585 ATG7O95352 703 aa8.85□□□□□ -0.99
SRGAP1-203ENST00000537585 MAP3K6O95382 1288 aa8.85□□□□□ -0.99
SRGAP1-203ENST00000537585 EPB42P16452 691 aa8.85□□□□□ -0.99
SRGAP1-203ENST00000537585 TRIM28Q13263 835 aaKnown RBP8.85□□□□□ -0.99
SRGAP1-203ENST00000537585 CMTR1Q8N1G2 835 aaKnown RBP8.85□□□□□ -0.99
SRGAP1-203ENST00000537585 XYLBO75191 536 aa8.84□□□□□ -0.99
SRGAP1-203ENST00000537585 RSPO4Q2I0M5 234 aaPredicted RBP8.84□□□□□ -0.99
SRGAP1-203ENST00000537585 TRPM4Q8TD43 1214 aa8.84□□□□□ -0.99
SRGAP1-203ENST00000537585 SEMA6BQ9H3T3 888 aa8.84□□□□□ -0.99
SRGAP1-203ENST00000537585 SPDYE3A6NKU9 549 aa8.83□□□□□ -1
SRGAP1-203ENST00000537585 J3QW42 95 aa8.83□□□□□ -1
SRGAP1-203ENST00000537585 ZBTB39O15060 712 aa8.83□□□□□ -1
SRGAP1-203ENST00000537585 RGS9O75916 674 aaPredicted RBP8.83□□□□□ -1
SRGAP1-203ENST00000537585 XP32Q5T750 250 aa8.83□□□□□ -1
SRGAP1-203ENST00000537585 C16orf46Q6P387 395 aa8.83□□□□□ -1
SRGAP1-203ENST00000537585 NSUN5Q96P11 429 aaKnown RBP8.83□□□□□ -1
SRGAP1-203ENST00000537585 MMP20O60882 483 aa8.82□□□□□ -1
SRGAP1-203ENST00000537585 APBA3O96018 575 aa8.82□□□□□ -1
SRGAP1-203ENST00000537585 GPLD1P80108 840 aa8.82□□□□□ -1
SRGAP1-203ENST00000537585 MBTPS1Q14703 1052 aa8.82□□□□□ -1
SRGAP1-203ENST00000537585 NKAPLQ5M9Q1 402 aa8.82□□□□□ -1
SRGAP1-203ENST00000537585 C1orf115Q9H7X2 142 aa8.82□□□□□ -1
SRGAP1-203ENST00000537585 EFCC1Q9HA90 598 aa8.82□□□□□ -1
SRGAP1-203ENST00000537585 SEPT3Q9UH03 358 aa8.82□□□□□ -1
SRGAP1-203ENST00000537585 FOXD4L6Q3SYB3 417 aaPredicted RBP8.81□□□□□ -1
SRGAP1-203ENST00000537585 FOXD4L3Q6VB84 417 aaPredicted RBP8.81□□□□□ -1
SRGAP1-203ENST00000537585 FMR1NBQ8N0W7 255 aaPredicted RBP8.81□□□□□ -1
SRGAP1-203ENST00000537585 SMG9Q9H0W8 520 aaKnown RBP8.81□□□□□ -1
SRGAP1-203ENST00000537585 EGFRP00533 1210 aa8.8□□□□□ -1
SRGAP1-203ENST00000537585 EIF2AK2P19525 551 aaKnown RBP8.8□□□□□ -1
SRGAP1-203ENST00000537585 COL13A1Q5TAT6 717 aaPredicted RBP8.8□□□□□ -1
SRGAP1-203ENST00000537585 MSL1Q68DK7 614 aa8.8□□□□□ -1
SRGAP1-203ENST00000537585 CLP1Q92989 425 aaKnown RBP8.8□□□□□ -1
SRGAP1-203ENST00000537585 PBXIP1Q96AQ6 731 aa8.8□□□□□ -1
SRGAP1-203ENST00000537585 TLR7Q9NYK1 1049 aaKnown RBP8.8□□□□□ -1
SRGAP1-203ENST00000537585 DEAF1O75398 565 aaPredicted RBP8.79□□□□□ -1
SRGAP1-203ENST00000537585 ELNP15502 786 aa8.79□□□□□ -1
SRGAP1-203ENST00000537585 ADGRE1Q14246 886 aa8.79□□□□□ -1
SRGAP1-203ENST00000537585 ELMSAN1Q6PJG2 1045 aa8.79□□□□□ -1
SRGAP1-203ENST00000537585 ADAMTSL4Q6UY14 1074 aa8.78□□□□□ -1
SRGAP1-203ENST00000537585 CARNS1A5YM72 827 aa8.77□□□□□ -1.01
SRGAP1-203ENST00000537585 NRLP54845 237 aa8.77□□□□□ -1.01
SRGAP1-203ENST00000537585 ATCAYQ86WG3 371 aa8.77□□□□□ -1.01
SRGAP1-203ENST00000537585 Q8N3U1 123 aa8.77□□□□□ -1.01
SRGAP1-203ENST00000537585 CCDC82Q8N4S0 544 aa8.77□□□□□ -1.01
SRGAP1-203ENST00000537585 CCDC97Q96F63 343 aaPredicted RBP8.77□□□□□ -1.01
SRGAP1-203ENST00000537585 FRRS1LQ9P0K9 344 aa8.77□□□□□ -1.01
SRGAP1-203ENST00000537585 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.77□□□□□ -1.01
SRGAP1-203ENST00000537585 DYRK3O43781 588 aa8.76□□□□□ -1.01
SRGAP1-203ENST00000537585 BRD2P25440 801 aaKnown RBP8.76□□□□□ -1.01
SRGAP1-203ENST00000537585 ZAP70P43403 619 aa8.76□□□□□ -1.01
SRGAP1-203ENST00000537585 RAC1P63000 192 aa8.76□□□□□ -1.01
SRGAP1-203ENST00000537585 GPR152Q8TDT2 470 aa8.76□□□□□ -1.01
SRGAP1-203ENST00000537585 COL26A1Q96A83 441 aa8.76□□□□□ -1.01
SRGAP1-203ENST00000537585 PLD4Q96BZ4 506 aa8.76□□□□□ -1.01
SRGAP1-203ENST00000537585 ATP2B4P23634 1241 aa8.75□□□□□ -1.01
SRGAP1-203ENST00000537585 NRG1Q02297 640 aaPredicted RBP8.75□□□□□ -1.01
SRGAP1-203ENST00000537585 LENG1Q96BZ8 264 aaPredicted RBP8.75□□□□□ -1.01
SRGAP1-203ENST00000537585 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.75□□□□□ -1.01
SRGAP1-203ENST00000537585 TRIM33Q9UPN9 1127 aa8.75□□□□□ -1.01
SRGAP1-203ENST00000537585 GTF3C3Q9Y5Q9 886 aa8.75□□□□□ -1.01
SRGAP1-203ENST00000537585 LOC102724428A0A0B4J2F2 783 aa8.74□□□□□ -1.01
SRGAP1-203ENST00000537585 UBAP1LF5GYI3 381 aa8.74□□□□□ -1.01
SRGAP1-203ENST00000537585 CYP2E1P05181 493 aaPredicted RBP8.74□□□□□ -1.01
SRGAP1-203ENST00000537585 SIK1P57059 783 aa8.74□□□□□ -1.01
SRGAP1-203ENST00000537585 ATP11AP98196 1134 aa8.74□□□□□ -1.01
SRGAP1-203ENST00000537585 GDF6Q6KF10 455 aaPredicted RBP8.74□□□□□ -1.01
SRGAP1-203ENST00000537585 WFDC8Q8IUA0 241 aa8.74□□□□□ -1.01
SRGAP1-203ENST00000537585 NACC1Q96RE7 527 aa8.74□□□□□ -1.01
SRGAP1-203ENST00000537585 C11orf16Q9NQ32 467 aa8.74□□□□□ -1.01
SRGAP1-203ENST00000537585 PSAPP07602 524 aa8.73□□□□□ -1.01
SRGAP1-203ENST00000537585 TXNRD3Q86VQ6 643 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms