RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 FAM135BQ49AJ0 1406 aa9.88□□□□□ -0.83
SRGAP1-202ENST00000537556 NPHP3Q7Z494 1330 aa9.88□□□□□ -0.83
SRGAP1-202ENST00000537556 EXOC5O00471 708 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 PAX7P23759 505 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 INPP5BP32019 993 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 INHBEP58166 350 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 TUBB4BP68371 445 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 IQCB1Q15051 598 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 RSRC2Q7L4I2 434 aaKnown RBP9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 PRPF38AQ8NAV1 312 aaKnown RBP9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 ERCC4Q92889 916 aaPredicted RBP9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 TATDN2Q93075 761 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 ESYT1Q9BSJ8 1104 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 CARD14Q9BXL6 1004 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 SCAND2PQ9GZW5 306 aaPredicted RBP9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 ODF2LQ9ULJ1 636 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 MRPL12P52815 198 aaKnown RBP9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 RWDD2BP57060 319 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 VPS53Q5VIR6 699 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 CPLX2Q6PUV4 134 aaKnown RBP9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 BORCS6Q96GS4 357 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 BICC1Q9H694 974 aaKnown RBP9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 ANO2Q9NQ90 1003 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 CPSF2Q9P2I0 782 aaKnown RBP9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 ZNF777Q9ULD5 760 aaPredicted RBP9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 PALD1Q9ULE6 856 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 PARP3Q9Y6F1 533 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 TSPY4P0CV99 314 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 TSPY10P0CW01 314 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 GNAI1P63096 354 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 ICA1Q05084 483 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 PPP2R3AQ06190 1150 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 TRAF1Q13077 416 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 LIMCH1Q9UPQ0 1083 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 FAM169AQ9Y6X4 670 aa9.87□□□□□ -0.83
SRGAP1-202ENST00000537556 IQGAP1P46940 1657 aa9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 SHANK2Q9UPX8 1470 aa9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 PSME1Q06323 249 aa9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 PREPLQ4J6C6 727 aaPredicted RBP9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 TTC6Q86TZ1 520 aa9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 ANKRD18AQ8IVF6 992 aa9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 CCDC102AQ96A19 550 aa9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 SYTL4Q96C24 671 aaPredicted RBP9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 PRAM1Q96QH2 718 aa9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 MTMR6Q9Y217 621 aa9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 ADGRB2O60241 1585 aa9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 PRG4Q92954 1404 aaPredicted RBP9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 ZNF518AQ6AHZ1 1483 aa9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 ARID3CA6NKF2 412 aa9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 ZSCAN12O43309 604 aa9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 GNAI3P08754 354 aa9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 MAP3K9P80192 1104 aa9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 GRIK3Q13003 919 aa9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 RBBP5Q15291 538 aaKnown RBP9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 GBP3Q9H0R5 595 aa9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 EPC1Q9H2F5 836 aa9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 OSBPL3Q9H4L5 887 aa9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 KIF24Q5T7B8 1368 aa9.86□□□□□ -0.83
SRGAP1-202ENST00000537556 PTCH1Q13635 1447 aa9.85□□□□□ -0.83
SRGAP1-202ENST00000537556 TMPOP42166 694 aaKnown RBP9.85□□□□□ -0.83
SRGAP1-202ENST00000537556 TBC1D8BQ0IIM8 1120 aa9.85□□□□□ -0.83
SRGAP1-202ENST00000537556 STX1AQ16623 288 aa9.85□□□□□ -0.83
SRGAP1-202ENST00000537556 RPAP2Q8IXW5 612 aaPredicted RBP9.85□□□□□ -0.83
SRGAP1-202ENST00000537556 CEP112Q8N8E3 955 aa9.85□□□□□ -0.83
SRGAP1-202ENST00000537556 TEX13AQ9BXU3 409 aaPredicted RBP9.85□□□□□ -0.83
SRGAP1-202ENST00000537556 FAM204AQ9H8W3 233 aa9.85□□□□□ -0.83
SRGAP1-202ENST00000537556 MSH6P52701 1360 aa9.85□□□□□ -0.83
SRGAP1-202ENST00000537556 C9orf84Q5VXU9 1444 aa9.85□□□□□ -0.83
SRGAP1-202ENST00000537556 IQGAP2Q13576 1575 aa9.85□□□□□ -0.83
SRGAP1-202ENST00000537556 TUBBP07437 444 aa9.85□□□□□ -0.83
SRGAP1-202ENST00000537556 USP5P45974 858 aa9.85□□□□□ -0.83
SRGAP1-202ENST00000537556 MTHFSP49914 203 aa9.85□□□□□ -0.83
SRGAP1-202ENST00000537556 BEND6Q5SZJ8 279 aaPredicted RBP9.85□□□□□ -0.83
SRGAP1-202ENST00000537556 WWC2Q6AWC2 1192 aa9.85□□□□□ -0.83
SRGAP1-202ENST00000537556 CCDC26Q8TAB7 109 aa9.85□□□□□ -0.83
SRGAP1-202ENST00000537556 AFAP1L1Q8TED9 768 aa9.85□□□□□ -0.83
SRGAP1-202ENST00000537556 ZNF483Q8TF39 744 aaPredicted RBP9.85□□□□□ -0.83
SRGAP1-202ENST00000537556 GOLGA6L9A6NEM1 432 aa9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 TRIM65Q6PJ69 517 aa9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 BICD2Q8TD16 824 aa9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 OTUD7AQ8TE49 926 aaPredicted RBP9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 ZKSCAN4Q969J2 545 aaPredicted RBP9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 NAT10Q9H0A0 1025 aaKnown RBP9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 ABCC4O15439 1325 aa9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 YTHDC2Q9H6S0 1430 aaKnown RBP9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 MYO5CQ9NQX4 1742 aa9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 VPS37CA5D8V6 355 aaPredicted RBP9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 NEFHP12036 1026 aa9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 PLPPR3Q6T4P5 718 aa9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 IQCA1Q86XH1 822 aa9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 ZNF513Q8N8E2 541 aaPredicted RBP9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 API5Q9BZZ5 524 aaKnown RBP9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 GJB2P29033 226 aa9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 ANKRD44Q8N8A2 993 aa9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 SPATA32Q96LK8 384 aa9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 PSMD1Q99460 953 aa9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 PLEKHA4Q9H4M7 779 aa9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 IRAK4Q9NWZ3 460 aa9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 L1RE1Q9UN81 338 aa9.84□□□□□ -0.83
SRGAP1-202ENST00000537556 TRIM35Q9UPQ4 493 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms