RNA–Protein interactions for RNA: ENST00000537179.1

LPCAT3-206, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-206ENST00000537179 KIAA2012Q0VF49 1180 aa20.43■□□□□ 0.86
LPCAT3-206ENST00000537179 SAMD7Q7Z3H4 446 aa20.43■□□□□ 0.86
LPCAT3-206ENST00000537179 ZNF296Q8WUU4 475 aaPredicted RBP20.43■□□□□ 0.86
LPCAT3-206ENST00000537179 LRRC37AA6NMS7 1700 aa20.43■□□□□ 0.86
LPCAT3-206ENST00000537179 DDX60Q8IY21 1712 aaKnown RBP20.43■□□□□ 0.86
LPCAT3-206ENST00000537179 EGFRP00533 1210 aa20.42■□□□□ 0.86
LPCAT3-206ENST00000537179 RASAL3Q86YV0 1011 aa20.42■□□□□ 0.86
LPCAT3-206ENST00000537179 TMX4Q9H1E5 349 aaPredicted RBP20.42■□□□□ 0.86
LPCAT3-206ENST00000537179 KNSTRNQ9Y448 316 aa20.42■□□□□ 0.86
LPCAT3-206ENST00000537179 GPTP24298 496 aa20.41■□□□□ 0.86
LPCAT3-206ENST00000537179 TBC1D10BQ4KMP7 808 aaPredicted RBP20.41■□□□□ 0.86
LPCAT3-206ENST00000537179 AMER1Q5JTC6 1135 aaPredicted RBP20.41■□□□□ 0.86
LPCAT3-206ENST00000537179 ABCC4O15439 1325 aa20.4■□□□□ 0.86
LPCAT3-206ENST00000537179 NTSR2O95665 410 aa20.4■□□□□ 0.86
LPCAT3-206ENST00000537179 SUSD4Q5VX71 490 aa20.4■□□□□ 0.86
LPCAT3-206ENST00000537179 FBXO46Q6PJ61 603 aaPredicted RBP20.4■□□□□ 0.86
LPCAT3-206ENST00000537179 DPP8Q6V1X1 898 aaPredicted RBP20.4■□□□□ 0.86
LPCAT3-206ENST00000537179 REM2Q8IYK8 340 aaPredicted RBP20.4■□□□□ 0.86
LPCAT3-206ENST00000537179 ZBTB12Q9Y330 459 aaPredicted RBP20.4■□□□□ 0.86
LPCAT3-206ENST00000537179 MAP3K15Q6ZN16 1313 aa20.39■□□□□ 0.85
LPCAT3-206ENST00000537179 ERVV-1B6SEH8 477 aa20.39■□□□□ 0.85
LPCAT3-206ENST00000537179 DPF2Q92785 391 aa20.38■□□□□ 0.85
LPCAT3-206ENST00000537179 DCPSQ96C86 337 aaKnown RBP20.38■□□□□ 0.85
LPCAT3-206ENST00000537179 TRIOBPQ9H2D6 2365 aa20.38■□□□□ 0.85
LPCAT3-206ENST00000537179 KIAA0100Q14667 2235 aaKnown RBP20.38■□□□□ 0.85
LPCAT3-206ENST00000537179 KDM3BQ7LBC6 1761 aa20.37■□□□□ 0.85
LPCAT3-206ENST00000537179 U2SURPO15042 1029 aaKnown RBP20.37■□□□□ 0.85
LPCAT3-206ENST00000537179 TBC1D8O95759 1140 aa20.37■□□□□ 0.85
LPCAT3-206ENST00000537179 MPNDQ8N594 471 aa20.37■□□□□ 0.85
LPCAT3-206ENST00000537179 NGEFQ8N5V2 710 aa20.37■□□□□ 0.85
LPCAT3-206ENST00000537179 CEP290O15078 2479 aa20.36■□□□□ 0.85
LPCAT3-206ENST00000537179 TTLL7Q6ZT98 887 aa20.36■□□□□ 0.85
LPCAT3-206ENST00000537179 SCN9AQ15858 1988 aa20.35■□□□□ 0.85
LPCAT3-206ENST00000537179 PSMD14O00487 310 aa20.35■□□□□ 0.85
LPCAT3-206ENST00000537179 CDCA5Q96FF9 252 aa20.35■□□□□ 0.85
LPCAT3-206ENST00000537179 KIF6Q6ZMV9 814 aa20.34■□□□□ 0.85
LPCAT3-206ENST00000537179 SP8Q8IXZ3 490 aa20.34■□□□□ 0.85
LPCAT3-206ENST00000537179 PHACTR3Q96KR7 559 aa20.34■□□□□ 0.85
LPCAT3-206ENST00000537179 NLRP3Q96P20 1036 aa20.34■□□□□ 0.85
LPCAT3-206ENST00000537179 ZBTB3Q9H5J0 574 aa20.34■□□□□ 0.85
LPCAT3-206ENST00000537179 GGA3Q9NZ52 723 aa20.34■□□□□ 0.85
LPCAT3-206ENST00000537179 POTEFA5A3E0 1075 aa20.33■□□□□ 0.85
LPCAT3-206ENST00000537179 GPR25O00155 361 aa20.33■□□□□ 0.85
LPCAT3-206ENST00000537179 RBM26Q5T8P6 1007 aaKnown RBP20.33■□□□□ 0.85
LPCAT3-206ENST00000537179 SULF1Q8IWU6 871 aa20.33■□□□□ 0.85
LPCAT3-206ENST00000537179 ZNF34Q8IZ26 560 aa20.33■□□□□ 0.85
LPCAT3-206ENST00000537179 ASTN2O75129 1339 aaPredicted RBP20.32■□□□□ 0.84
LPCAT3-206ENST00000537179 NOM1Q5C9Z4 860 aaKnown RBP20.32■□□□□ 0.84
LPCAT3-206ENST00000537179 MCM10Q7L590 875 aa20.32■□□□□ 0.84
LPCAT3-206ENST00000537179 BBOX1O75936 387 aa20.31■□□□□ 0.84
LPCAT3-206ENST00000537179 KIF4BQ2VIQ3 1234 aa20.31■□□□□ 0.84
LPCAT3-206ENST00000537179 PSME4Q14997 1843 aa20.31■□□□□ 0.84
LPCAT3-206ENST00000537179 CUL9Q8IWT3 2517 aa20.3■□□□□ 0.84
LPCAT3-206ENST00000537179 PPP1R42Q7Z4L9 355 aa20.3■□□□□ 0.84
LPCAT3-206ENST00000537179 DBNDD1Q9H9R9 158 aa20.3■□□□□ 0.84
LPCAT3-206ENST00000537179 RANBP2P49792 3224 aaKnown RBP20.29■□□□□ 0.84
LPCAT3-206ENST00000537179 HSPA5P11021 654 aaKnown RBP20.29■□□□□ 0.84
LPCAT3-206ENST00000537179 RPS12P25398 132 aaKnown RBP20.29■□□□□ 0.84
LPCAT3-206ENST00000537179 PRKAR2BP31323 418 aa20.29■□□□□ 0.84
LPCAT3-206ENST00000537179 RTL9Q8NET4 1388 aa20.29■□□□□ 0.84
LPCAT3-206ENST00000537179 A0A0C4DFX4 3053 aa20.29■□□□□ 0.84
LPCAT3-206ENST00000537179 COL6A3P12111 3177 aa20.28■□□□□ 0.84
LPCAT3-206ENST00000537179 FKBP1BP68106 108 aa20.28■□□□□ 0.84
LPCAT3-206ENST00000537179 SLC10A5Q5PT55 438 aa20.28■□□□□ 0.84
LPCAT3-206ENST00000537179 COLQQ9Y215 455 aaPredicted RBP20.28■□□□□ 0.84
LPCAT3-206ENST00000537179 DLG5Q8TDM6 1919 aa20.27■□□□□ 0.84
LPCAT3-206ENST00000537179 FKTNO75072 461 aa20.27■□□□□ 0.84
LPCAT3-206ENST00000537179 PARP10Q53GL7 1025 aa20.27■□□□□ 0.84
LPCAT3-206ENST00000537179 GIGYF2Q6Y7W6 1299 aaKnown RBP20.27■□□□□ 0.84
LPCAT3-206ENST00000537179 RTF1Q92541 710 aaKnown RBP20.27■□□□□ 0.84
LPCAT3-206ENST00000537179 RSPH6AQ9H0K4 717 aa20.27■□□□□ 0.84
LPCAT3-206ENST00000537179 RRP7AQ9Y3A4 280 aaKnown RBP20.27■□□□□ 0.84
LPCAT3-206ENST00000537179 DLL1O00548 723 aa20.26■□□□□ 0.83
LPCAT3-206ENST00000537179 MYL6BP14649 208 aa20.26■□□□□ 0.83
LPCAT3-206ENST00000537179 EIF4G2P78344 907 aaKnown RBP eCLIP20.26■□□□□ 0.83
LPCAT3-206ENST00000537179 DCTN1Q14203 1278 aa20.26■□□□□ 0.83
LPCAT3-206ENST00000537179 MOB2Q70IA6 237 aa20.26■□□□□ 0.83
LPCAT3-206ENST00000537179 KCNQ5Q9NR82 932 aa20.26■□□□□ 0.83
LPCAT3-206ENST00000537179 TM4SF4P48230 202 aa20.25■□□□□ 0.83
LPCAT3-206ENST00000537179 GRAPQ13588 217 aa20.25■□□□□ 0.83
LPCAT3-206ENST00000537179 GRAPLQ8TC17 118 aaPredicted RBP20.25■□□□□ 0.83
LPCAT3-206ENST00000537179 UTP14AQ9BVJ6 771 aaKnown RBP20.25■□□□□ 0.83
LPCAT3-206ENST00000537179 R3HDMLQ9H3Y0 253 aa20.25■□□□□ 0.83
LPCAT3-206ENST00000537179 COL4A1P02462 1669 aa20.25■□□□□ 0.83
LPCAT3-206ENST00000537179 LAMB1P07942 1786 aa20.24■□□□□ 0.83
LPCAT3-206ENST00000537179 WASHC4Q2M389 1173 aa20.24■□□□□ 0.83
LPCAT3-206ENST00000537179 CC2D1BQ5T0F9 858 aaKnown RBP20.24■□□□□ 0.83
LPCAT3-206ENST00000537179 ANGEL2Q5VTE6 544 aaKnown RBP20.24■□□□□ 0.83
LPCAT3-206ENST00000537179 INTS3Q68E01 1043 aaKnown RBP20.24■□□□□ 0.83
LPCAT3-206ENST00000537179 CFHR5Q9BXR6 569 aa20.24■□□□□ 0.83
LPCAT3-206ENST00000537179 MIS18AQ9NYP9 233 aa20.24■□□□□ 0.83
LPCAT3-206ENST00000537179 RIMBP2O15034 1052 aa20.23■□□□□ 0.83
LPCAT3-206ENST00000537179 ECE2O60344 883 aa20.23■□□□□ 0.83
LPCAT3-206ENST00000537179 DDX46Q7L014 1031 aaKnown RBP20.23■□□□□ 0.83
LPCAT3-206ENST00000537179 UBE2Q2LH0YL09 131 aa20.22■□□□□ 0.83
LPCAT3-206ENST00000537179 HCLS1P14317 486 aaPredicted RBP20.22■□□□□ 0.83
LPCAT3-206ENST00000537179 MKRN3Q13064 507 aaKnown RBP20.21■□□□□ 0.83
LPCAT3-206ENST00000537179 TRIM17Q9Y577 477 aa20.21■□□□□ 0.83
LPCAT3-206ENST00000537179 ZNF609O15014 1411 aa20.2■□□□□ 0.82
LPCAT3-206ENST00000537179 EN2P19622 333 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms