RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 NSD3Q9BZ95 1437 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 H2AFXP16104 143 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-213ENST00000537002 ACTN2P35609 894 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 ZSCAN25Q6NSZ9 544 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 ANKRD44Q8N8A2 993 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 TNRQ92752 1358 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 ATP10BO94823 1461 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 RPGRIP1LQ68CZ1 1315 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 CDC42BPAQ5VT25 1732 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 DHX16O60231 1041 aaKnown RBP6.23□□□□□ -1.41
PTPRD-213ENST00000537002 IQCEQ6IPM2 695 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 TAX1BP1Q86VP1 789 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 F13A1P00488 732 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 CCAR1Q8IX12 1150 aaKnown RBP6.23□□□□□ -1.41
PTPRD-213ENST00000537002 CTCFLQ8NI51 663 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-213ENST00000537002 HIP1O00291 1037 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 CCT4P50991 539 aaKnown RBP6.22□□□□□ -1.41
PTPRD-213ENST00000537002 MICALCLQ6ZW33 695 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 ADGRL3Q9HAR2 1447 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 TTC41PQ6P2S7 1318 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 CCDC151A5D8V7 595 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 GBP2P32456 591 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-213ENST00000537002 HNRNPH2P55795 449 aaKnown RBP6.22□□□□□ -1.41
PTPRD-213ENST00000537002 SATB1Q01826 763 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 PIP4K2BP78356 416 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 MAGEC2Q9UBF1 373 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-213ENST00000537002 SETBP1Q9Y6X0 1596 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 ZBTB7BO15156 539 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-213ENST00000537002 DNM1Q05193 864 aaKnown RBP6.22□□□□□ -1.41
PTPRD-213ENST00000537002 FSIP1Q8NA03 581 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 ZNHIT6Q9NWK9 470 aaKnown RBP6.22□□□□□ -1.41
PTPRD-213ENST00000537002 DONSONQ9NYP3 566 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 MYO3AQ8NEV4 1616 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 MYO5CQ9NQX4 1742 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 SDSP20132 328 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 GUCY1B3Q02153 619 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 TYRO3Q06418 890 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 NEXNQ0ZGT2 675 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 AIMP1Q12904 312 aaKnown RBP6.22□□□□□ -1.41
PTPRD-213ENST00000537002 MAP9Q49MG5 647 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 VPS53Q5VIR6 699 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 MCTP2Q6DN12 878 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 DACT1Q9NYF0 836 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 SPG7Q9UQ90 795 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 PTPRTO14522 1441 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 A0A087WUV0 522 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-213ENST00000537002 HOMEZQ8IX15 550 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 JMYQ8N9B5 988 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 NEK11Q8NG66 645 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 STAG1Q8WVM7 1258 aa6.22□□□□□ -1.41
PTPRD-213ENST00000537002 ZNF215Q9UL58 517 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-213ENST00000537002 ISM2Q6H9L7 571 aa6.21□□□□□ -1.41
PTPRD-213ENST00000537002 NBPF11Q86T75 865 aa6.21□□□□□ -1.41
PTPRD-213ENST00000537002 SRLQ86TD4 932 aa6.21□□□□□ -1.41
PTPRD-213ENST00000537002 ZDHHC9Q9Y397 364 aa6.21□□□□□ -1.41
PTPRD-213ENST00000537002 DISP1Q96F81 1524 aa6.21□□□□□ -1.41
PTPRD-213ENST00000537002 SOS1Q07889 1333 aaPredicted RBP6.21□□□□□ -1.41
PTPRD-213ENST00000537002 PPFIA3O75145 1194 aa6.21□□□□□ -1.41
PTPRD-213ENST00000537002 PNMA6AP0CW24 399 aaPredicted RBP6.21□□□□□ -1.41
PTPRD-213ENST00000537002 NYAP1Q6ZVC0 841 aa6.21□□□□□ -1.41
PTPRD-213ENST00000537002 AACSQ86V21 672 aa6.21□□□□□ -1.41
PTPRD-213ENST00000537002 DYDC1Q8WWB3 177 aa6.21□□□□□ -1.41
PTPRD-213ENST00000537002 TM6SF1Q9BZW5 370 aa6.21□□□□□ -1.41
PTPRD-213ENST00000537002 CSB-PGBD3P0DP91 1061 aa6.21□□□□□ -1.42
PTPRD-213ENST00000537002 NBPF20Q3BBV1 942 aa6.21□□□□□ -1.42
PTPRD-213ENST00000537002 KIAA1328Q86T90 577 aa6.21□□□□□ -1.42
PTPRD-213ENST00000537002 AOPEPQ8N6M6 819 aa6.21□□□□□ -1.42
PTPRD-213ENST00000537002 BANK1Q8NDB2 785 aa6.21□□□□□ -1.42
PTPRD-213ENST00000537002 RABGGTAQ92696 567 aa6.21□□□□□ -1.42
PTPRD-213ENST00000537002 TEFQ10587 303 aa6.21□□□□□ -1.42
PTPRD-213ENST00000537002 KMT5BQ4FZB7 885 aa6.21□□□□□ -1.42
PTPRD-213ENST00000537002 CCDC30Q5VVM6 783 aa6.21□□□□□ -1.42
PTPRD-213ENST00000537002 NGDNQ8NEJ9 315 aaKnown RBP6.21□□□□□ -1.42
PTPRD-213ENST00000537002 ERVK-7P63135 1459 aa6.21□□□□□ -1.42
PTPRD-213ENST00000537002 GADD45BO75293 160 aaPredicted RBP6.21□□□□□ -1.42
PTPRD-213ENST00000537002 DNAJC21Q5F1R6 531 aaKnown RBP6.21□□□□□ -1.42
PTPRD-213ENST00000537002 CEP57Q86XR8 500 aa6.21□□□□□ -1.42
PTPRD-213ENST00000537002 C16orf71Q8IYS4 520 aaPredicted RBP6.21□□□□□ -1.42
PTPRD-213ENST00000537002 MYOM1P52179 1685 aa6.21□□□□□ -1.42
PTPRD-213ENST00000537002 MAP2K2P36507 400 aa6.21□□□□□ -1.42
PTPRD-213ENST00000537002 NECAB1Q8N987 351 aa6.21□□□□□ -1.42
PTPRD-213ENST00000537002 RRP15Q9Y3B9 282 aaKnown RBP6.21□□□□□ -1.42
PTPRD-213ENST00000537002 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.21□□□□□ -1.42
PTPRD-213ENST00000537002 RPAP1Q9BWH6 1393 aaPredicted RBP6.21□□□□□ -1.42
PTPRD-213ENST00000537002 FBXO38Q6PIJ6 1188 aa6.21□□□□□ -1.42
PTPRD-213ENST00000537002 FMNL3Q8IVF7 1028 aa6.21□□□□□ -1.42
PTPRD-213ENST00000537002 CD2BP2O95400 341 aaKnown RBP6.2□□□□□ -1.42
PTPRD-213ENST00000537002 PIP4K2AP48426 406 aaPredicted RBP6.2□□□□□ -1.42
PTPRD-213ENST00000537002 CEBPAP49715 358 aaPredicted RBP6.2□□□□□ -1.42
PTPRD-213ENST00000537002 PSME1Q06323 249 aa6.2□□□□□ -1.42
PTPRD-213ENST00000537002 GBP6Q6ZN66 633 aa6.2□□□□□ -1.42
PTPRD-213ENST00000537002 PLA2G4DQ86XP0 818 aa6.2□□□□□ -1.42
PTPRD-213ENST00000537002 JARID2Q92833 1246 aaPredicted RBP6.2□□□□□ -1.42
PTPRD-213ENST00000537002 SRGAP3O43295 1099 aa6.2□□□□□ -1.42
PTPRD-213ENST00000537002 NEFHP12036 1026 aa6.2□□□□□ -1.42
PTPRD-213ENST00000537002 OAS2P29728 719 aaKnown RBP6.2□□□□□ -1.42
PTPRD-213ENST00000537002 HSP90AB2PQ58FF8 381 aa6.2□□□□□ -1.42
PTPRD-213ENST00000537002 ERICH2A1L162 156 aa6.2□□□□□ -1.42
PTPRD-213ENST00000537002 GIGYF1O75420 1035 aaPredicted RBP6.2□□□□□ -1.42
PTPRD-213ENST00000537002 FUCA2Q9BTY2 467 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms