RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 SH2B1Q9NRF2 756 aaPredicted RBP18.35■□□□□ 0.53
CHFR-213ENST00000536843 HYPKQ9NX55 129 aa18.35■□□□□ 0.53
CHFR-213ENST00000536843 SGSM2O43147 1006 aa18.34■□□□□ 0.53
CHFR-213ENST00000536843 UBTFL1P0CB47 393 aaPredicted RBP18.34■□□□□ 0.53
CHFR-213ENST00000536843 PNMA6AP0CW24 399 aaPredicted RBP18.34■□□□□ 0.53
CHFR-213ENST00000536843 PLEKHO1Q53GL0 409 aaPredicted RBP18.34■□□□□ 0.53
CHFR-213ENST00000536843 ARHGEF25Q86VW2 580 aa18.34■□□□□ 0.53
CHFR-213ENST00000536843 TXLNBQ8N3L3 684 aa18.34■□□□□ 0.53
CHFR-213ENST00000536843 ZSCAN31Q96LW9 406 aaPredicted RBP18.34■□□□□ 0.53
CHFR-213ENST00000536843 TRERF1Q96PN7 1200 aa18.34■□□□□ 0.53
CHFR-213ENST00000536843 PLA2G4AP47712 749 aa18.34■□□□□ 0.53
CHFR-213ENST00000536843 AKAP4Q5JQC9 854 aa18.34■□□□□ 0.53
CHFR-213ENST00000536843 TEX35Q5T0J7 233 aa18.34■□□□□ 0.53
CHFR-213ENST00000536843 CCDC83Q8IWF9 413 aa18.34■□□□□ 0.53
CHFR-213ENST00000536843 RASEFQ8IZ41 740 aa18.34■□□□□ 0.53
CHFR-213ENST00000536843 GTF3C6Q969F1 213 aa18.34■□□□□ 0.53
CHFR-213ENST00000536843 LSG1Q9H089 658 aaKnown RBP18.34■□□□□ 0.53
CHFR-213ENST00000536843 TMEM94Q12767 1356 aa18.34■□□□□ 0.53
CHFR-213ENST00000536843 CLCN6P51797 869 aa18.33■□□□□ 0.53
CHFR-213ENST00000536843 CCZ1BP86790 482 aa18.33■□□□□ 0.53
CHFR-213ENST00000536843 CCZ1P86791 482 aaPredicted RBP18.33■□□□□ 0.53
CHFR-213ENST00000536843 CHMP4AQ9BY43 222 aa18.33■□□□□ 0.53
CHFR-213ENST00000536843 CHPF2Q9P2E5 772 aa18.33■□□□□ 0.53
CHFR-213ENST00000536843 NPHP3Q7Z494 1330 aa18.33■□□□□ 0.52
CHFR-213ENST00000536843 VPS37CA5D8V6 355 aaPredicted RBP18.33■□□□□ 0.52
CHFR-213ENST00000536843 TEFQ10587 303 aa18.33■□□□□ 0.52
CHFR-213ENST00000536843 LARP6Q9BRS8 491 aaKnown RBP18.33■□□□□ 0.52
CHFR-213ENST00000536843 PXDNLA1KZ92 1463 aa18.32■□□□□ 0.52
CHFR-213ENST00000536843 BTBD11A6QL63 1104 aa18.32■□□□□ 0.52
CHFR-213ENST00000536843 DNAJC25Q9H1X3 360 aa18.32■□□□□ 0.52
CHFR-213ENST00000536843 RGPD2P0DJD1 1756 aa18.32■□□□□ 0.52
CHFR-213ENST00000536843 MED1Q15648 1581 aaPredicted RBP18.32■□□□□ 0.52
CHFR-213ENST00000536843 ZRANB2O95218 330 aaKnown RBP eCLIP18.32■□□□□ 0.52
CHFR-213ENST00000536843 SCAND2PQ9GZW5 306 aaPredicted RBP18.32■□□□□ 0.52
CHFR-213ENST00000536843 YY1AP1Q9H869 796 aa18.32■□□□□ 0.52
CHFR-213ENST00000536843 CHMP3Q9Y3E7 222 aa18.32■□□□□ 0.52
CHFR-213ENST00000536843 CACNA1FO60840 1977 aa18.32■□□□□ 0.52
CHFR-213ENST00000536843 DCCP43146 1447 aa18.31■□□□□ 0.52
CHFR-213ENST00000536843 ANXA1P04083 346 aa18.31■□□□□ 0.52
CHFR-213ENST00000536843 TPM4P67936 248 aa18.31■□□□□ 0.52
CHFR-213ENST00000536843 ARID5BQ14865 1188 aa18.31■□□□□ 0.52
CHFR-213ENST00000536843 VPS53Q5VIR6 699 aa18.31■□□□□ 0.52
CHFR-213ENST00000536843 ANKRD24Q8TF21 1146 aa18.31■□□□□ 0.52
CHFR-213ENST00000536843 RNMTO43148 476 aaKnown RBP18.31■□□□□ 0.52
CHFR-213ENST00000536843 HOXB7P09629 217 aa18.31■□□□□ 0.52
CHFR-213ENST00000536843 IQCB1Q15051 598 aa18.31■□□□□ 0.52
CHFR-213ENST00000536843 ERCC6LQ2NKX8 1250 aa18.31■□□□□ 0.52
CHFR-213ENST00000536843 CCDC93Q567U6 631 aa18.31■□□□□ 0.52
CHFR-213ENST00000536843 RASSF4Q9H2L5 321 aa18.31■□□□□ 0.52
CHFR-213ENST00000536843 CCDC69A6NI79 296 aa18.3■□□□□ 0.52
CHFR-213ENST00000536843 ST3GAL1Q11201 340 aa18.3■□□□□ 0.52
CHFR-213ENST00000536843 AMOTQ4VCS5 1084 aa18.3■□□□□ 0.52
CHFR-213ENST00000536843 CASTP20810 708 aaKnown RBP18.3■□□□□ 0.52
CHFR-213ENST00000536843 KRT28Q7Z3Y7 464 aa18.3■□□□□ 0.52
CHFR-213ENST00000536843 PPP1R42Q7Z4L9 355 aa18.3■□□□□ 0.52
CHFR-213ENST00000536843 SSH3Q8TE77 659 aa18.3■□□□□ 0.52
CHFR-213ENST00000536843 AXIN2Q9Y2T1 843 aa18.3■□□□□ 0.52
CHFR-213ENST00000536843 PI4KAP2A4QPH2 592 aa18.29■□□□□ 0.52
CHFR-213ENST00000536843 ATF3P18847 181 aa18.29■□□□□ 0.52
CHFR-213ENST00000536843 PI4KAP1Q8N8J0 262 aa18.29■□□□□ 0.52
CHFR-213ENST00000536843 NFATC2IPQ8NCF5 419 aa18.29■□□□□ 0.52
CHFR-213ENST00000536843 UBXN6Q9BZV1 441 aa18.29■□□□□ 0.52
CHFR-213ENST00000536843 GOLGA6L4A6NEF3 574 aa18.29■□□□□ 0.52
CHFR-213ENST00000536843 C1orf141Q5JVX7 400 aa18.29■□□□□ 0.52
CHFR-213ENST00000536843 BEND3Q5T5X7 828 aa18.29■□□□□ 0.52
CHFR-213ENST00000536843 RGS22Q8NE09 1264 aa18.29■□□□□ 0.52
CHFR-213ENST00000536843 IL1RAPL2Q9NP60 686 aa18.29■□□□□ 0.52
CHFR-213ENST00000536843 TRMT1Q9NXH9 659 aaKnown RBP18.29■□□□□ 0.52
CHFR-213ENST00000536843 PXDNQ92626 1479 aa18.28■□□□□ 0.52
CHFR-213ENST00000536843 GOLGA6L19H0YKK7 550 aa18.28■□□□□ 0.52
CHFR-213ENST00000536843 PAXIP1Q6ZW49 1069 aaPredicted RBP18.28■□□□□ 0.52
CHFR-213ENST00000536843 FILIP1Q7Z7B0 1213 aa18.28■□□□□ 0.52
CHFR-213ENST00000536843 DNAAF4Q8WXU2 420 aa18.28■□□□□ 0.52
CHFR-213ENST00000536843 TM6SF1Q9BZW5 370 aa18.28■□□□□ 0.52
CHFR-213ENST00000536843 C1orf167Q5SNV9 1468 aa18.28■□□□□ 0.52
CHFR-213ENST00000536843 ATP8B1O43520 1251 aa18.28■□□□□ 0.52
CHFR-213ENST00000536843 NBPF7P0C2Y1 421 aaPredicted RBP18.28■□□□□ 0.52
CHFR-213ENST00000536843 LARP1BQ659C4 914 aaKnown RBP18.28■□□□□ 0.52
CHFR-213ENST00000536843 CDC37L1Q7L3B6 337 aa18.28■□□□□ 0.52
CHFR-213ENST00000536843 NEK11Q8NG66 645 aa18.28■□□□□ 0.52
CHFR-213ENST00000536843 PDRG1Q9NUG6 133 aa18.28■□□□□ 0.52
CHFR-213ENST00000536843 RSPH14Q9UHP6 348 aa18.28■□□□□ 0.52
CHFR-213ENST00000536843 PHRF1Q9P1Y6 1649 aaKnown RBP18.28■□□□□ 0.52
CHFR-213ENST00000536843 SLIT3O75094 1523 aa18.27■□□□□ 0.52
CHFR-213ENST00000536843 TUBB4AP04350 444 aa18.27■□□□□ 0.52
CHFR-213ENST00000536843 TNNT3P45378 269 aaPredicted RBP18.27■□□□□ 0.52
CHFR-213ENST00000536843 SNW1Q13573 536 aaKnown RBP18.27■□□□□ 0.52
CHFR-213ENST00000536843 POLA2Q14181 598 aa18.27■□□□□ 0.52
CHFR-213ENST00000536843 SPATA32Q96LK8 384 aa18.27■□□□□ 0.52
CHFR-213ENST00000536843 ARGLU1Q9NWB6 273 aaPredicted RBP18.27■□□□□ 0.52
CHFR-213ENST00000536843 KDM3BQ7LBC6 1761 aa18.27■□□□□ 0.51
CHFR-213ENST00000536843 NPHP1O15259 732 aa18.27■□□□□ 0.51
CHFR-213ENST00000536843 SURF6O75683 361 aaKnown RBP18.27■□□□□ 0.51
CHFR-213ENST00000536843 CPA1P15085 419 aa18.27■□□□□ 0.51
CHFR-213ENST00000536843 PDCP20941 246 aa18.27■□□□□ 0.51
CHFR-213ENST00000536843 NOP2P46087 812 aaKnown RBP18.27■□□□□ 0.51
CHFR-213ENST00000536843 SYT10Q6XYQ8 523 aa18.27■□□□□ 0.51
CHFR-213ENST00000536843 N4BP2Q86UW6 1770 aaPredicted RBP18.26■□□□□ 0.51
CHFR-213ENST00000536843 LMO7Q8WWI1 1683 aa18.26■□□□□ 0.51
CHFR-213ENST00000536843 NR1I2O75469 434 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms