RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 FAM157BP0CG42 384 aa8.7□□□□□ -1.02
PRKDC-208ENST00000536710 CCDC155Q8N6L0 562 aa8.7□□□□□ -1.02
PRKDC-208ENST00000536710 KIFC2Q96AC6 838 aa8.7□□□□□ -1.02
PRKDC-208ENST00000536710 PNMA5Q96PV4 448 aa8.7□□□□□ -1.02
PRKDC-208ENST00000536710 EGFRP00533 1210 aa8.69□□□□□ -1.02
PRKDC-208ENST00000536710 CES1P23141 567 aa8.69□□□□□ -1.02
PRKDC-208ENST00000536710 IRS1P35568 1242 aa8.69□□□□□ -1.02
PRKDC-208ENST00000536710 CCINQ13939 588 aa8.69□□□□□ -1.02
PRKDC-208ENST00000536710 C1orf127Q8N9H9 656 aa8.69□□□□□ -1.02
PRKDC-208ENST00000536710 EPS8L3Q8TE67 593 aaKnown RBP8.69□□□□□ -1.02
PRKDC-208ENST00000536710 FRMD6Q96NE9 622 aa8.69□□□□□ -1.02
PRKDC-208ENST00000536710 CNTN3Q9P232 1028 aa8.69□□□□□ -1.02
PRKDC-208ENST00000536710 SCAMP3O14828 347 aaKnown RBP8.68□□□□□ -1.02
PRKDC-208ENST00000536710 EREGO14944 169 aa8.68□□□□□ -1.02
PRKDC-208ENST00000536710 THBS1P07996 1170 aa8.68□□□□□ -1.02
PRKDC-208ENST00000536710 MAPTP10636 758 aaKnown RBP8.68□□□□□ -1.02
PRKDC-208ENST00000536710 EIF4BP23588 611 aaKnown RBP8.68□□□□□ -1.02
PRKDC-208ENST00000536710 KCNQ4P56696 695 aa8.68□□□□□ -1.02
PRKDC-208ENST00000536710 DBN1Q16643 649 aa8.68□□□□□ -1.02
PRKDC-208ENST00000536710 PI16Q6UXB8 463 aa8.68□□□□□ -1.02
PRKDC-208ENST00000536710 IRX2Q9BZI1 471 aaPredicted RBP8.68□□□□□ -1.02
PRKDC-208ENST00000536710 NPHS2Q9NP85 383 aa8.68□□□□□ -1.02
PRKDC-208ENST00000536710 C11orf16Q9NQ32 467 aa8.68□□□□□ -1.02
PRKDC-208ENST00000536710 GADD45BO75293 160 aaPredicted RBP8.67□□□□□ -1.02
PRKDC-208ENST00000536710 RARAP10276 462 aa8.67□□□□□ -1.02
PRKDC-208ENST00000536710 TARSP26639 723 aaKnown RBP8.67□□□□□ -1.02
PRKDC-208ENST00000536710 TNP2Q05952 138 aa8.67□□□□□ -1.02
PRKDC-208ENST00000536710 TRIM22Q8IYM9 498 aa8.67□□□□□ -1.02
PRKDC-208ENST00000536710 ABHD17AQ96GS6 310 aa8.67□□□□□ -1.02
PRKDC-208ENST00000536710 CUEDC1Q9NWM3 386 aaPredicted RBP8.67□□□□□ -1.02
PRKDC-208ENST00000536710 GMPR2Q9P2T1 348 aaKnown RBP8.67□□□□□ -1.02
PRKDC-208ENST00000536710 AK5Q9Y6K8 562 aa8.67□□□□□ -1.02
PRKDC-208ENST00000536710 PHF20L1A8MW92 1017 aa8.66□□□□□ -1.02
PRKDC-208ENST00000536710 EFSO43281 561 aa8.66□□□□□ -1.02
PRKDC-208ENST00000536710 C9orf131Q5VYM1 1079 aa8.66□□□□□ -1.02
PRKDC-208ENST00000536710 PMEPA1Q969W9 287 aa8.66□□□□□ -1.02
PRKDC-208ENST00000536710 TRIM47Q96LD4 638 aa8.66□□□□□ -1.02
PRKDC-208ENST00000536710 GSX2Q9BZM3 304 aa8.66□□□□□ -1.02
PRKDC-208ENST00000536710 CHRDQ9H2X0 955 aa8.66□□□□□ -1.02
PRKDC-208ENST00000536710 STRN4Q9NRL3 753 aa8.66□□□□□ -1.02
PRKDC-208ENST00000536710 MARK1Q9P0L2 795 aa8.66□□□□□ -1.02
PRKDC-208ENST00000536710 KANSL3Q9P2N6 904 aa8.66□□□□□ -1.02
PRKDC-208ENST00000536710 BNIP3LO60238 219 aa8.65□□□□□ -1.02
PRKDC-208ENST00000536710 CYP2E1P05181 493 aaPredicted RBP8.65□□□□□ -1.02
PRKDC-208ENST00000536710 NFKB1P19838 968 aa8.65□□□□□ -1.02
PRKDC-208ENST00000536710 CD33P20138 364 aa8.65□□□□□ -1.02
PRKDC-208ENST00000536710 LAMC2Q13753 1193 aa8.65□□□□□ -1.02
PRKDC-208ENST00000536710 GTPBP3Q969Y2 492 aaKnown RBP8.65□□□□□ -1.02
PRKDC-208ENST00000536710 CDC14CA4D256 554 aa8.64□□□□□ -1.03
PRKDC-208ENST00000536710 MMP20O60882 483 aa8.64□□□□□ -1.03
PRKDC-208ENST00000536710 ITGA6P23229 1130 aa8.64□□□□□ -1.03
PRKDC-208ENST00000536710 ERCC5P28715 1186 aaPredicted RBP8.64□□□□□ -1.03
PRKDC-208ENST00000536710 SPEM2Q0P670 501 aa8.64□□□□□ -1.03
PRKDC-208ENST00000536710 UBAP2LQ14157 1087 aaKnown RBP8.64□□□□□ -1.03
PRKDC-208ENST00000536710 GRIN2CQ14957 1233 aa8.64□□□□□ -1.03
PRKDC-208ENST00000536710 RAB44Q7Z6P3 723 aaPredicted RBP8.64□□□□□ -1.03
PRKDC-208ENST00000536710 BHMTQ93088 406 aa8.64□□□□□ -1.03
PRKDC-208ENST00000536710 ZNF837Q96EG3 531 aaPredicted RBP8.64□□□□□ -1.03
PRKDC-208ENST00000536710 C12orf49Q9H741 205 aa8.64□□□□□ -1.03
PRKDC-208ENST00000536710 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.64□□□□□ -1.03
PRKDC-208ENST00000536710 GIPC1O14908 333 aa8.63□□□□□ -1.03
PRKDC-208ENST00000536710 PSAPP07602 524 aa8.63□□□□□ -1.03
PRKDC-208ENST00000536710 HDLBPQ00341 1268 aaKnown RBP8.63□□□□□ -1.03
PRKDC-208ENST00000536710 GALNT12Q8IXK2 581 aa8.63□□□□□ -1.03
PRKDC-208ENST00000536710 CRELD1Q96HD1 420 aa8.63□□□□□ -1.03
PRKDC-208ENST00000536710 GMCL1Q96IK5 515 aa8.63□□□□□ -1.03
PRKDC-208ENST00000536710 OSBPL7Q9BZF2 842 aa8.63□□□□□ -1.03
PRKDC-208ENST00000536710 ZFATQ9P243 1243 aa8.63□□□□□ -1.03
PRKDC-208ENST00000536710 PHF24Q9UPV7 400 aa8.63□□□□□ -1.03
PRKDC-208ENST00000536710 EDN3P14138 238 aa8.62□□□□□ -1.03
PRKDC-208ENST00000536710 SNRPBP14678 240 aaKnown RBP8.62□□□□□ -1.03
PRKDC-208ENST00000536710 ZNF76P36508 570 aa8.62□□□□□ -1.03
PRKDC-208ENST00000536710 NEUROD1Q13562 356 aa8.62□□□□□ -1.03
PRKDC-208ENST00000536710 LDLRAD1Q5T700 205 aa8.62□□□□□ -1.03
PRKDC-208ENST00000536710 FOXR1Q6PIV2 292 aa8.62□□□□□ -1.03
PRKDC-208ENST00000536710 NXPE4Q6UWF7 544 aa8.62□□□□□ -1.03
PRKDC-208ENST00000536710 NCAPG2Q86XI2 1143 aa8.62□□□□□ -1.03
PRKDC-208ENST00000536710 RNF34Q969K3 372 aa8.62□□□□□ -1.03
PRKDC-208ENST00000536710 TRERF1Q96PN7 1200 aa8.62□□□□□ -1.03
PRKDC-208ENST00000536710 BCO2Q9BYV7 579 aa8.62□□□□□ -1.03
PRKDC-208ENST00000536710 ATXN7L1Q9ULK2 861 aaPredicted RBP8.62□□□□□ -1.03
PRKDC-208ENST00000536710 C11orf95C9JLR9 678 aaPredicted RBP8.61□□□□□ -1.03
PRKDC-208ENST00000536710 OR13H1Q8NG92 308 aa8.61□□□□□ -1.03
PRKDC-208ENST00000536710 SLC30A3Q99726 388 aa8.61□□□□□ -1.03
PRKDC-208ENST00000536710 EHD4Q9H223 541 aa8.61□□□□□ -1.03
PRKDC-208ENST00000536710 NDFIP2Q9NV92 336 aa8.61□□□□□ -1.03
PRKDC-208ENST00000536710 USP35Q9P2H5 1018 aa8.61□□□□□ -1.03
PRKDC-208ENST00000536710 FAM8A1Q9UBU6 413 aa8.61□□□□□ -1.03
PRKDC-208ENST00000536710 GPR25O00155 361 aa8.6□□□□□ -1.03
PRKDC-208ENST00000536710 CTSHP09668 335 aa8.6□□□□□ -1.03
PRKDC-208ENST00000536710 USP17L7P0C7H9 530 aa8.6□□□□□ -1.03
PRKDC-208ENST00000536710 FGFR3P22607 806 aa8.6□□□□□ -1.03
PRKDC-208ENST00000536710 Q6ZNB5 142 aa8.6□□□□□ -1.03
PRKDC-208ENST00000536710 NT5DC4Q86YG4 428 aa8.6□□□□□ -1.03
PRKDC-208ENST00000536710 SUV39H2Q9H5I1 410 aa8.6□□□□□ -1.03
PRKDC-208ENST00000536710 IGFLR1Q9H665 355 aa8.6□□□□□ -1.03
PRKDC-208ENST00000536710 LATS2Q9NRM7 1088 aa8.6□□□□□ -1.03
PRKDC-208ENST00000536710 METTL5Q9NRN9 209 aaKnown RBP8.6□□□□□ -1.03
PRKDC-208ENST00000536710 PPP4R2Q9NY27 417 aa8.6□□□□□ -1.03
PRKDC-208ENST00000536710 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms