RNA–Protein interactions for RNA: ENST00000536688.5

RFX4-204, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 2,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-204ENST00000536688 DDR1Q08345 913 aa11.83□□□□□ -0.52
RFX4-204ENST00000536688 CAMK4Q16566 473 aa11.83□□□□□ -0.52
RFX4-204ENST00000536688 MAP9Q49MG5 647 aa11.83□□□□□ -0.52
RFX4-204ENST00000536688 TTLL5Q6EMB2 1281 aa11.83□□□□□ -0.52
RFX4-204ENST00000536688 NBPF10Q6P3W6 841 aaKnown RBP11.83□□□□□ -0.52
RFX4-204ENST00000536688 LRRC31Q6UY01 552 aa11.83□□□□□ -0.52
RFX4-204ENST00000536688 HDXQ7Z353 690 aa11.83□□□□□ -0.52
RFX4-204ENST00000536688 CKAP2LQ8IYA6 745 aa11.83□□□□□ -0.52
RFX4-204ENST00000536688 FAM71BQ8TC56 605 aa11.83□□□□□ -0.52
RFX4-204ENST00000536688 DDX11Q96FC9 970 aa11.83□□□□□ -0.52
RFX4-204ENST00000536688 CCDC34Q96HJ3 373 aa11.83□□□□□ -0.52
RFX4-204ENST00000536688 UPF3BQ9BZI7 483 aaKnown RBP11.83□□□□□ -0.52
RFX4-204ENST00000536688 TRAK1Q9UPV9 953 aa11.83□□□□□ -0.52
RFX4-204ENST00000536688 PARP3Q9Y6F1 533 aa11.83□□□□□ -0.52
RFX4-204ENST00000536688 AOX1Q06278 1338 aa11.83□□□□□ -0.52
RFX4-204ENST00000536688 SALL3Q9BXA9 1300 aa11.83□□□□□ -0.52
RFX4-204ENST00000536688 CDK12Q9NYV4 1490 aaPredicted RBP11.83□□□□□ -0.52
RFX4-204ENST00000536688 GOLGA6L4A6NEF3 574 aa11.82□□□□□ -0.52
RFX4-204ENST00000536688 TMCO5BA8MYB1 307 aa11.82□□□□□ -0.52
RFX4-204ENST00000536688 ERLIN2O94905 339 aa11.82□□□□□ -0.52
RFX4-204ENST00000536688 MNAT1P51948 309 aa11.82□□□□□ -0.52
RFX4-204ENST00000536688 IRX1P78414 480 aaPredicted RBP11.82□□□□□ -0.52
RFX4-204ENST00000536688 SETQ01105 290 aaPredicted RBP11.82□□□□□ -0.52
RFX4-204ENST00000536688 ZKSCAN8Q15776 578 aaPredicted RBP11.82□□□□□ -0.52
RFX4-204ENST00000536688 NBPF9Q3BBW0 867 aa11.82□□□□□ -0.52
RFX4-204ENST00000536688 TRIM65Q6PJ69 517 aa11.82□□□□□ -0.52
RFX4-204ENST00000536688 NOL8Q76FK4 1167 aaKnown RBP11.82□□□□□ -0.52
RFX4-204ENST00000536688 POTEDQ86YR6 584 aa11.82□□□□□ -0.52
RFX4-204ENST00000536688 USP16Q9Y5T5 823 aa11.82□□□□□ -0.52
RFX4-204ENST00000536688 TUBBP07437 444 aa11.82□□□□□ -0.52
RFX4-204ENST00000536688 GNAI3P08754 354 aa11.82□□□□□ -0.52
RFX4-204ENST00000536688 CARD6Q9BX69 1037 aa11.82□□□□□ -0.52
RFX4-204ENST00000536688 PARD6BQ9BYG5 372 aa11.82□□□□□ -0.52
RFX4-204ENST00000536688 GNL3LQ9NVN8 582 aaKnown RBP11.82□□□□□ -0.52
RFX4-204ENST00000536688 VPS18Q9P253 973 aa11.82□□□□□ -0.52
RFX4-204ENST00000536688 CHD2O14647 1828 aaKnown RBP11.82□□□□□ -0.52
RFX4-204ENST00000536688 GOLGA6L9A6NEM1 432 aa11.81□□□□□ -0.52
RFX4-204ENST00000536688 SFPQP23246 707 aaKnown RBP eCLIP11.81□□□□□ -0.52
RFX4-204ENST00000536688 HNRNPH1P31943 449 aaKnown RBP11.81□□□□□ -0.52
RFX4-204ENST00000536688 TXLNAP40222 546 aa11.81□□□□□ -0.52
RFX4-204ENST00000536688 HAP1P54257 671 aaPredicted RBP11.81□□□□□ -0.52
RFX4-204ENST00000536688 GNAI1P63096 354 aa11.81□□□□□ -0.52
RFX4-204ENST00000536688 MAP3K9P80192 1104 aa11.81□□□□□ -0.52
RFX4-204ENST00000536688 HOMER1Q86YM7 354 aa11.81□□□□□ -0.52
RFX4-204ENST00000536688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.81□□□□□ -0.52
RFX4-204ENST00000536688 PLCH2O75038 1416 aa11.81□□□□□ -0.52
RFX4-204ENST00000536688 ATXN2Q99700 1313 aaKnown RBP11.81□□□□□ -0.52
RFX4-204ENST00000536688 BECN2A8MW95 431 aa11.81□□□□□ -0.52
RFX4-204ENST00000536688 GJB2P29033 226 aa11.81□□□□□ -0.52
RFX4-204ENST00000536688 NEDD9Q14511 834 aa11.81□□□□□ -0.52
RFX4-204ENST00000536688 VPS53Q5VIR6 699 aa11.81□□□□□ -0.52
RFX4-204ENST00000536688 CCDC30Q5VVM6 783 aa11.81□□□□□ -0.52
RFX4-204ENST00000536688 FOXR1Q6PIV2 292 aa11.81□□□□□ -0.52
RFX4-204ENST00000536688 RUFY3Q7L099 469 aa11.81□□□□□ -0.52
RFX4-204ENST00000536688 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.81□□□□□ -0.52
RFX4-204ENST00000536688 GOLGA1Q92805 767 aa11.81□□□□□ -0.52
RFX4-204ENST00000536688 MIEF2Q96C03 454 aa11.81□□□□□ -0.52
RFX4-204ENST00000536688 ACBD3Q9H3P7 528 aa11.81□□□□□ -0.52
RFX4-204ENST00000536688 STAP2Q9UGK3 403 aa11.81□□□□□ -0.52
RFX4-204ENST00000536688 ERLIN1O75477 346 aa11.8□□□□□ -0.52
RFX4-204ENST00000536688 AK2P54819 239 aa11.8□□□□□ -0.52
RFX4-204ENST00000536688 NUTM1Q86Y26 1132 aa11.8□□□□□ -0.52
RFX4-204ENST00000536688 FMNL3Q8IVF7 1028 aa11.8□□□□□ -0.52
RFX4-204ENST00000536688 MICALL1Q8N3F8 863 aa11.8□□□□□ -0.52
RFX4-204ENST00000536688 NAT10Q9H0A0 1025 aaKnown RBP11.8□□□□□ -0.52
RFX4-204ENST00000536688 RAB21Q9UL25 225 aa11.8□□□□□ -0.52
RFX4-204ENST00000536688 AKAP2Q9Y2D5 859 aa11.8□□□□□ -0.52
RFX4-204ENST00000536688 ANKRD26Q9UPS8 1709 aa11.8□□□□□ -0.52
RFX4-204ENST00000536688 URI1O94763 535 aaPredicted RBP11.79□□□□□ -0.52
RFX4-204ENST00000536688 FCHSD2O94868 740 aa11.79□□□□□ -0.52
RFX4-204ENST00000536688 GBP6Q6ZN66 633 aa11.79□□□□□ -0.52
RFX4-204ENST00000536688 TICAM2Q86XR7 235 aa11.79□□□□□ -0.52
RFX4-204ENST00000536688 GIMAP7Q8NHV1 300 aa11.79□□□□□ -0.52
RFX4-204ENST00000536688 ANO10Q9NW15 660 aa11.79□□□□□ -0.52
RFX4-204ENST00000536688 ANKRD33BA6NCL7 494 aa11.79□□□□□ -0.52
RFX4-204ENST00000536688 ZSCAN12O43309 604 aa11.79□□□□□ -0.52
RFX4-204ENST00000536688 BEND6Q5SZJ8 279 aaPredicted RBP11.79□□□□□ -0.52
RFX4-204ENST00000536688 SPATA32Q96LK8 384 aa11.79□□□□□ -0.52
RFX4-204ENST00000536688 PPP6R1Q9UPN7 881 aa11.79□□□□□ -0.52
RFX4-204ENST00000536688 MRFAP1Q9Y605 127 aa11.79□□□□□ -0.52
RFX4-204ENST00000536688 IFT172Q9UG01 1749 aa11.79□□□□□ -0.52
RFX4-204ENST00000536688 PNPLA6Q8IY17 1366 aa11.78□□□□□ -0.52
RFX4-204ENST00000536688 ADGRB1O14514 1584 aa11.78□□□□□ -0.52
RFX4-204ENST00000536688 IRF6O14896 467 aa11.78□□□□□ -0.52
RFX4-204ENST00000536688 TUBB2AQ13885 445 aa11.78□□□□□ -0.52
RFX4-204ENST00000536688 PPP2R5AQ15172 486 aa11.78□□□□□ -0.52
RFX4-204ENST00000536688 HSP90B2PQ58FF3 399 aa11.78□□□□□ -0.52
RFX4-204ENST00000536688 EFCAB2Q5VUJ9 269 aa11.78□□□□□ -0.52
RFX4-204ENST00000536688 DHX40Q8IX18 779 aaKnown RBP11.78□□□□□ -0.52
RFX4-204ENST00000536688 TUBB2BQ9BVA1 445 aa11.78□□□□□ -0.52
RFX4-204ENST00000536688 TM6SF1Q9BZW5 370 aa11.78□□□□□ -0.52
RFX4-204ENST00000536688 GBP3Q9H0R5 595 aa11.78□□□□□ -0.52
RFX4-204ENST00000536688 PDE11AQ9HCR9 933 aa11.78□□□□□ -0.52
RFX4-204ENST00000536688 CPSF1Q10570 1443 aaKnown RBP11.78□□□□□ -0.52
RFX4-204ENST00000536688 QRICH2Q9H0J4 1663 aa11.78□□□□□ -0.52
RFX4-204ENST00000536688 RAPGEF3O95398 923 aa11.78□□□□□ -0.52
RFX4-204ENST00000536688 PPP2R3AQ06190 1150 aa11.78□□□□□ -0.52
RFX4-204ENST00000536688 KCNV1Q6PIU1 500 aa11.78□□□□□ -0.52
RFX4-204ENST00000536688 CEP57L1Q8IYX8 460 aa11.78□□□□□ -0.52
RFX4-204ENST00000536688 PRPF38AQ8NAV1 312 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms