RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 DCTPP1Q9H773 170 aa14.34□□□□□ -0.11
CDCA3-206ENST00000536241 PA2G4Q9UQ80 394 aaKnown RBP14.34□□□□□ -0.11
CDCA3-206ENST00000536241 ABCC12Q96J65 1359 aa14.34□□□□□ -0.11
CDCA3-206ENST00000536241 SF3B3Q15393 1217 aaKnown RBP14.33□□□□□ -0.12
CDCA3-206ENST00000536241 MTFR1LQ9H019 292 aa14.33□□□□□ -0.12
CDCA3-206ENST00000536241 COL24A1Q17RW2 1714 aa14.33□□□□□ -0.12
CDCA3-206ENST00000536241 KDM2BQ8NHM5 1336 aa14.32□□□□□ -0.12
CDCA3-206ENST00000536241 SURF6O75683 361 aaKnown RBP14.32□□□□□ -0.12
CDCA3-206ENST00000536241 ITGA6P23229 1130 aa14.32□□□□□ -0.12
CDCA3-206ENST00000536241 IFIT5Q13325 482 aaKnown RBP14.32□□□□□ -0.12
CDCA3-206ENST00000536241 CCDC57Q2TAC2 916 aa14.32□□□□□ -0.12
CDCA3-206ENST00000536241 FAM161AQ3B820 660 aa14.32□□□□□ -0.12
CDCA3-206ENST00000536241 CCDC152Q4G0S7 254 aa14.32□□□□□ -0.12
CDCA3-206ENST00000536241 ZNF594Q96JF6 807 aaPredicted RBP14.32□□□□□ -0.12
CDCA3-206ENST00000536241 SEC31BQ9NQW1 1179 aa14.32□□□□□ -0.12
CDCA3-206ENST00000536241 PTPN12Q05209 780 aaKnown RBP14.31□□□□□ -0.12
CDCA3-206ENST00000536241 CENPQQ7L2Z9 268 aaPredicted RBP14.31□□□□□ -0.12
CDCA3-206ENST00000536241 EXOC6BQ9Y2D4 811 aa14.31□□□□□ -0.12
CDCA3-206ENST00000536241 ANKRD18BA2A2Z9 1011 aa14.31□□□□□ -0.12
CDCA3-206ENST00000536241 SMC5Q8IY18 1101 aa14.31□□□□□ -0.12
CDCA3-206ENST00000536241 GCC1Q96CN9 775 aa14.31□□□□□ -0.12
CDCA3-206ENST00000536241 BRIP1Q9BX63 1249 aa14.31□□□□□ -0.12
CDCA3-206ENST00000536241 SIL1Q9H173 461 aa14.31□□□□□ -0.12
CDCA3-206ENST00000536241 COPRSQ9NQ92 184 aa14.31□□□□□ -0.12
CDCA3-206ENST00000536241 NOP58Q9Y2X3 529 aaKnown RBP14.31□□□□□ -0.12
CDCA3-206ENST00000536241 DDX60Q8IY21 1712 aaKnown RBP14.31□□□□□ -0.12
CDCA3-206ENST00000536241 APBB1O00213 710 aa14.3□□□□□ -0.12
CDCA3-206ENST00000536241 POLD1P28340 1107 aa14.3□□□□□ -0.12
CDCA3-206ENST00000536241 G3BP1Q13283 466 aaKnown RBP eCLIP14.3□□□□□ -0.12
CDCA3-206ENST00000536241 MYH3P11055 1940 aa14.29□□□□□ -0.12
CDCA3-206ENST00000536241 KLRG2A4D1S0 409 aaPredicted RBP14.29□□□□□ -0.12
CDCA3-206ENST00000536241 SOCS7O14512 581 aa14.29□□□□□ -0.12
CDCA3-206ENST00000536241 TAF7LQ5H9L4 462 aa14.29□□□□□ -0.12
CDCA3-206ENST00000536241 ANKRD45Q5TZF3 282 aa14.29□□□□□ -0.12
CDCA3-206ENST00000536241 PUS3Q9BZE2 481 aaKnown RBP14.29□□□□□ -0.12
CDCA3-206ENST00000536241 CASZ1Q86V15 1759 aa14.28□□□□□ -0.12
CDCA3-206ENST00000536241 PDE6BP35913 854 aa14.28□□□□□ -0.12
CDCA3-206ENST00000536241 OS9Q13438 667 aaPredicted RBP14.28□□□□□ -0.12
CDCA3-206ENST00000536241 CRY2Q49AN0 593 aa14.28□□□□□ -0.12
CDCA3-206ENST00000536241 LRRC24Q50LG9 513 aa14.28□□□□□ -0.12
CDCA3-206ENST00000536241 BCL11AQ9H165 835 aa14.28□□□□□ -0.12
CDCA3-206ENST00000536241 NRXN2Q9P2S2 1712 aa14.28□□□□□ -0.12
CDCA3-206ENST00000536241 HSP90AB4PQ58FF6 505 aa14.27□□□□□ -0.12
CDCA3-206ENST00000536241 LDHAL6AQ6ZMR3 332 aa14.27□□□□□ -0.12
CDCA3-206ENST00000536241 DDX46Q7L014 1031 aaKnown RBP14.27□□□□□ -0.12
CDCA3-206ENST00000536241 RPGRQ92834 1020 aaKnown RBP14.27□□□□□ -0.12
CDCA3-206ENST00000536241 CELF1Q92879 486 aaKnown RBP14.27□□□□□ -0.12
CDCA3-206ENST00000536241 SGIP1Q9BQI5 828 aa14.27□□□□□ -0.12
CDCA3-206ENST00000536241 PDZRN3Q9UPQ7 1066 aa14.27□□□□□ -0.12
CDCA3-206ENST00000536241 EYA2O00167 538 aa14.26□□□□□ -0.13
CDCA3-206ENST00000536241 SMARCA5O60264 1052 aaPredicted RBP14.26□□□□□ -0.13
CDCA3-206ENST00000536241 RAB11FIP3O75154 756 aa14.26□□□□□ -0.13
CDCA3-206ENST00000536241 SASH1O94885 1247 aa14.26□□□□□ -0.13
CDCA3-206ENST00000536241 PTGER2P43116 358 aa14.26□□□□□ -0.13
CDCA3-206ENST00000536241 RPS8P62241 208 aaKnown RBP14.26□□□□□ -0.13
CDCA3-206ENST00000536241 ATG9AQ7Z3C6 839 aa14.26□□□□□ -0.13
CDCA3-206ENST00000536241 RBM17Q96I25 401 aaKnown RBP14.26□□□□□ -0.13
CDCA3-206ENST00000536241 CDC5LQ99459 802 aaKnown RBP14.26□□□□□ -0.13
CDCA3-206ENST00000536241 MPHOSPH8Q99549 860 aa14.26□□□□□ -0.13
CDCA3-206ENST00000536241 RTL9Q8NET4 1388 aa14.26□□□□□ -0.13
CDCA3-206ENST00000536241 SRGNP10124 158 aa14.25□□□□□ -0.13
CDCA3-206ENST00000536241 IGHMBP2P38935 993 aaKnown RBP14.25□□□□□ -0.13
CDCA3-206ENST00000536241 NUCB1Q02818 461 aa14.25□□□□□ -0.13
CDCA3-206ENST00000536241 RIC1Q4ADV7 1423 aa14.25□□□□□ -0.13
CDCA3-206ENST00000536241 ANKRD18AQ8IVF6 992 aa14.25□□□□□ -0.13
CDCA3-206ENST00000536241 RHPN1Q8TCX5 695 aa14.25□□□□□ -0.13
CDCA3-206ENST00000536241 CNNM1Q9NRU3 951 aa14.25□□□□□ -0.13
CDCA3-206ENST00000536241 RIPOR2Q9Y4F9 1068 aa14.25□□□□□ -0.13
CDCA3-206ENST00000536241 LAMB2P55268 1798 aa14.25□□□□□ -0.13
CDCA3-206ENST00000536241 TAF1P21675 1872 aa14.25□□□□□ -0.13
CDCA3-206ENST00000536241 H0YIN7 160 aa14.25□□□□□ -0.13
CDCA3-206ENST00000536241 CHRNA5P30532 468 aa14.25□□□□□ -0.13
CDCA3-206ENST00000536241 HOXA10P31260 410 aaPredicted RBP14.25□□□□□ -0.13
CDCA3-206ENST00000536241 CHD1LQ86WJ1 897 aa14.25□□□□□ -0.13
CDCA3-206ENST00000536241 SKAP1Q86WV1 359 aa14.25□□□□□ -0.13
CDCA3-206ENST00000536241 C2CD5Q86YS7 1000 aa14.25□□□□□ -0.13
CDCA3-206ENST00000536241 KIF1BPQ96EK5 621 aa14.25□□□□□ -0.13
CDCA3-206ENST00000536241 LRRCC1Q9C099 1032 aa14.25□□□□□ -0.13
CDCA3-206ENST00000536241 SPON1Q9HCB6 807 aa14.25□□□□□ -0.13
CDCA3-206ENST00000536241 IL1RAPL2Q9NP60 686 aa14.25□□□□□ -0.13
CDCA3-206ENST00000536241 FBXO3Q9UK99 471 aa14.25□□□□□ -0.13
CDCA3-206ENST00000536241 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.25□□□□□ -0.13
CDCA3-206ENST00000536241 TNRC6CQ9HCJ0 1690 aaKnown RBP14.25□□□□□ -0.13
CDCA3-206ENST00000536241 CIAO1O76071 339 aa14.24□□□□□ -0.13
CDCA3-206ENST00000536241 NPR1P16066 1061 aa14.24□□□□□ -0.13
CDCA3-206ENST00000536241 IL15P40933 162 aaPredicted RBP14.24□□□□□ -0.13
CDCA3-206ENST00000536241 TFCP2Q12800 502 aa14.24□□□□□ -0.13
CDCA3-206ENST00000536241 GRAPQ13588 217 aa14.24□□□□□ -0.13
CDCA3-206ENST00000536241 ERC1Q8IUD2 1116 aa14.24□□□□□ -0.13
CDCA3-206ENST00000536241 C16orf71Q8IYS4 520 aaPredicted RBP14.24□□□□□ -0.13
CDCA3-206ENST00000536241 GRAPLQ8TC17 118 aaPredicted RBP14.24□□□□□ -0.13
CDCA3-206ENST00000536241 ZNF622Q969S3 477 aaKnown RBP eCLIP14.24□□□□□ -0.134e-7■□□□□ 9.1
CDCA3-206ENST00000536241 CRAMP1Q96RY5 1269 aa14.24□□□□□ -0.13
CDCA3-206ENST00000536241 LNPKQ9C0E8 428 aa14.24□□□□□ -0.13
CDCA3-206ENST00000536241 BSDC1Q9NW68 430 aaPredicted RBP14.24□□□□□ -0.13
CDCA3-206ENST00000536241 ZBTB47Q9UFB7 747 aaPredicted RBP14.24□□□□□ -0.13
CDCA3-206ENST00000536241 ANKRD31Q8N7Z5 1873 aa14.24□□□□□ -0.13
CDCA3-206ENST00000536241 MASTLQ96GX5 879 aa14.23□□□□□ -0.13
CDCA3-206ENST00000536241 CEP126Q9P2H0 1117 aa14.23□□□□□ -0.13
CDCA3-206ENST00000536241 PPP1R1BQ9UD71 204 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms