RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 ZC3H15Q8WU90 426 aaKnown RBP14.51□□□□□ -0.09
LMO3-213ENST00000536172 CAPNS2Q96L46 248 aa14.51□□□□□ -0.09
LMO3-213ENST00000536172 TRMT112Q9UI30 125 aaKnown RBP14.51□□□□□ -0.09
LMO3-213ENST00000536172 TLL2Q9Y6L7 1015 aa14.51□□□□□ -0.09
LMO3-213ENST00000536172 LRRC37AA6NMS7 1700 aa14.5□□□□□ -0.09
LMO3-213ENST00000536172 HSPA8P11142 646 aaKnown RBP14.5□□□□□ -0.09
LMO3-213ENST00000536172 MAP2K2P36507 400 aa14.5□□□□□ -0.09
LMO3-213ENST00000536172 PROSER3Q2NL68 480 aa14.5□□□□□ -0.09
LMO3-213ENST00000536172 CIAPIN1Q6FI81 312 aa14.5□□□□□ -0.09
LMO3-213ENST00000536172 HHIPL1Q96JK4 782 aa14.5□□□□□ -0.09
LMO3-213ENST00000536172 GPR101Q96P66 508 aaPredicted RBP14.5□□□□□ -0.09
LMO3-213ENST00000536172 PGAP2Q9UHJ9 254 aa14.5□□□□□ -0.09
LMO3-213ENST00000536172 HOXB7P09629 217 aa14.49□□□□□ -0.09
LMO3-213ENST00000536172 GRAPQ13588 217 aa14.49□□□□□ -0.09
LMO3-213ENST00000536172 CST9Q5W186 159 aa14.49□□□□□ -0.09
LMO3-213ENST00000536172 PAXIP1Q6ZW49 1069 aaPredicted RBP14.49□□□□□ -0.09
LMO3-213ENST00000536172 GRAPLQ8TC17 118 aaPredicted RBP14.49□□□□□ -0.09
LMO3-213ENST00000536172 XAGE3Q8WTP9 111 aa14.49□□□□□ -0.09
LMO3-213ENST00000536172 CHL1O00533 1208 aa14.48□□□□□ -0.09
LMO3-213ENST00000536172 CA12O43570 354 aa14.48□□□□□ -0.09
LMO3-213ENST00000536172 ANXA1P04083 346 aa14.48□□□□□ -0.09
LMO3-213ENST00000536172 HCLS1P14317 486 aaPredicted RBP14.48□□□□□ -0.09
LMO3-213ENST00000536172 GMPSP49915 693 aaPredicted RBP14.48□□□□□ -0.09
LMO3-213ENST00000536172 AIMP1Q12904 312 aaKnown RBP14.48□□□□□ -0.09
LMO3-213ENST00000536172 BCL2L13Q9BXK5 485 aa14.48□□□□□ -0.09
LMO3-213ENST00000536172 DDX60Q8IY21 1712 aaKnown RBP14.48□□□□□ -0.09
LMO3-213ENST00000536172 TAF1P21675 1872 aa14.48□□□□□ -0.09
LMO3-213ENST00000536172 TRAF5O00463 557 aa14.47□□□□□ -0.09
LMO3-213ENST00000536172 SAPCD2Q86UD0 394 aa14.47□□□□□ -0.09
LMO3-213ENST00000536172 PLBD2Q8NHP8 589 aa14.47□□□□□ -0.09
LMO3-213ENST00000536172 H7C1D1 291 aa14.46□□□□□ -0.09
LMO3-213ENST00000536172 CELF2O95319 508 aaKnown RBP14.46□□□□□ -0.09
LMO3-213ENST00000536172 CYP4F22Q6NT55 531 aa14.46□□□□□ -0.09
LMO3-213ENST00000536172 ANKRD13DQ6ZTN6 518 aa14.46□□□□□ -0.09
LMO3-213ENST00000536172 CDC37L1Q7L3B6 337 aa14.46□□□□□ -0.09
LMO3-213ENST00000536172 DPF2Q92785 391 aa14.46□□□□□ -0.09
LMO3-213ENST00000536172 RUNDC1Q96C34 613 aa14.46□□□□□ -0.09
LMO3-213ENST00000536172 DBF4Q9UBU7 674 aaPredicted RBP14.46□□□□□ -0.09
LMO3-213ENST00000536172 MYBBP1AQ9BQG0 1328 aaKnown RBP14.45□□□□□ -0.1
LMO3-213ENST00000536172 RAD17O75943 681 aa14.45□□□□□ -0.1
LMO3-213ENST00000536172 HSP90B1P14625 803 aaKnown RBP14.45□□□□□ -0.1
LMO3-213ENST00000536172 FMR1Q06787 632 aaKnown RBP eCLIP14.45□□□□□ -0.1
LMO3-213ENST00000536172 SF3B3Q15393 1217 aaKnown RBP14.45□□□□□ -0.1
LMO3-213ENST00000536172 HDGFL1Q5TGJ6 251 aa14.45□□□□□ -0.1
LMO3-213ENST00000536172 SLC51AQ86UW1 340 aa14.45□□□□□ -0.1
LMO3-213ENST00000536172 NECTIN2Q92692 538 aa14.45□□□□□ -0.1
LMO3-213ENST00000536172 ABHD8Q96I13 439 aa14.45□□□□□ -0.1
LMO3-213ENST00000536172 HYPKQ9NX55 129 aa14.45□□□□□ -0.1
LMO3-213ENST00000536172 CNOT7Q9UIV1 285 aaKnown RBP14.45□□□□□ -0.1
LMO3-213ENST00000536172 DUOX1Q9NRD9 1551 aa14.44□□□□□ -0.1
LMO3-213ENST00000536172 GRM1Q13255 1194 aa14.44□□□□□ -0.1
LMO3-213ENST00000536172 WASHC4Q2M389 1173 aa14.44□□□□□ -0.1
LMO3-213ENST00000536172 CHPF2Q9P2E5 772 aa14.44□□□□□ -0.1
LMO3-213ENST00000536172 RPS12P25398 132 aaKnown RBP14.43□□□□□ -0.1
LMO3-213ENST00000536172 BRPF1P55201 1214 aaPredicted RBP14.43□□□□□ -0.1
LMO3-213ENST00000536172 TRIM28Q13263 835 aaKnown RBP14.43□□□□□ -0.1
LMO3-213ENST00000536172 WDR43Q15061 677 aaKnown RBP eCLIP14.43□□□□□ -0.1
LMO3-213ENST00000536172 NEUROD2Q15784 382 aa14.43□□□□□ -0.1
LMO3-213ENST00000536172 EYA3Q99504 573 aa14.43□□□□□ -0.1
LMO3-213ENST00000536172 ISCA1Q9BUE6 129 aa14.43□□□□□ -0.1
LMO3-213ENST00000536172 GLIS2Q9BZE0 524 aaPredicted RBP14.43□□□□□ -0.1
LMO3-213ENST00000536172 ZNF316A6NFI3 1004 aaPredicted RBP14.42□□□□□ -0.1
LMO3-213ENST00000536172 YDJCA8MPS7 323 aa14.42□□□□□ -0.1
LMO3-213ENST00000536172 HIRAP54198 1017 aaPredicted RBP14.42□□□□□ -0.1
LMO3-213ENST00000536172 NOGQ13253 232 aa14.42□□□□□ -0.1
LMO3-213ENST00000536172 MICALL2Q8IY33 904 aa14.42□□□□□ -0.1
LMO3-213ENST00000536172 CFAP44Q96MT7 982 aa14.42□□□□□ -0.1
LMO3-213ENST00000536172 CHMP4AQ9BY43 222 aa14.42□□□□□ -0.1
LMO3-213ENST00000536172 NSFL1CQ9UNZ2 370 aaKnown RBP14.42□□□□□ -0.1
LMO3-213ENST00000536172 TRIM35Q9UPQ4 493 aa14.42□□□□□ -0.1
LMO3-213ENST00000536172 LAS1LQ9Y4W2 734 aaKnown RBP14.42□□□□□ -0.1
LMO3-213ENST00000536172 POLR2AP24928 1970 aaKnown RBP14.42□□□□□ -0.1
LMO3-213ENST00000536172 CCDC146Q8IYE0 955 aa14.41□□□□□ -0.1
LMO3-213ENST00000536172 FAM89AQ96GI7 184 aa14.41□□□□□ -0.1
LMO3-213ENST00000536172 C6orf229H3BNL8 230 aa14.4□□□□□ -0.1
LMO3-213ENST00000536172 AOC2O75106 756 aa14.4□□□□□ -0.1
LMO3-213ENST00000536172 CALD1Q05682 793 aaKnown RBP14.4□□□□□ -0.1
LMO3-213ENST00000536172 KRT24Q2M2I5 525 aa14.4□□□□□ -0.1
LMO3-213ENST00000536172 TRPM4Q8TD43 1214 aa14.4□□□□□ -0.1
LMO3-213ENST00000536172 ZNF408Q9H9D4 720 aa14.4□□□□□ -0.1
LMO3-213ENST00000536172 PSMD14O00487 310 aa14.39□□□□□ -0.11
LMO3-213ENST00000536172 IRS4O14654 1257 aaPredicted RBP14.39□□□□□ -0.11
LMO3-213ENST00000536172 RPS8P62241 208 aaKnown RBP14.39□□□□□ -0.11
LMO3-213ENST00000536172 DUSP27Q5VZP5 1158 aa14.39□□□□□ -0.11
LMO3-213ENST00000536172 ZBTB38Q8NAP3 1195 aaPredicted RBP14.39□□□□□ -0.11
LMO3-213ENST00000536172 CELF1Q92879 486 aaKnown RBP14.39□□□□□ -0.11
LMO3-213ENST00000536172 CASP8AP2Q9UKL3 1982 aa14.38□□□□□ -0.11
LMO3-213ENST00000536172 ATP5J2-PTCD1G3V325 749 aa14.38□□□□□ -0.11
LMO3-213ENST00000536172 ECE2O60344 883 aa14.38□□□□□ -0.11
LMO3-213ENST00000536172 GOLGA2Q08379 1002 aa14.38□□□□□ -0.11
LMO3-213ENST00000536172 KRT26Q7Z3Y9 468 aa14.38□□□□□ -0.11
LMO3-213ENST00000536172 RIC3Q7Z5B4 369 aa14.38□□□□□ -0.11
LMO3-213ENST00000536172 USP48Q86UV5 1035 aa14.38□□□□□ -0.11
LMO3-213ENST00000536172 DCPSQ96C86 337 aaKnown RBP14.38□□□□□ -0.11
LMO3-213ENST00000536172 ZC3H12CQ9C0D7 883 aaKnown RBP14.38□□□□□ -0.11
LMO3-213ENST00000536172 DBNDD1Q9H9R9 158 aa14.38□□□□□ -0.11
LMO3-213ENST00000536172 PODXL2Q9NZ53 605 aa14.38□□□□□ -0.11
LMO3-213ENST00000536172 POLLQ9UGP5 575 aa14.38□□□□□ -0.11
LMO3-213ENST00000536172 PSME4Q14997 1843 aa14.38□□□□□ -0.11
LMO3-213ENST00000536172 AKAP11Q9UKA4 1901 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms