RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 RGS9O75916 674 aaPredicted RBP10.07□□□□□ -0.8
VBP1-203ENST00000535916 CPB1P15086 417 aa10.07□□□□□ -0.8
VBP1-203ENST00000535916 FAM35AQ86V20 835 aa10.07□□□□□ -0.8
VBP1-203ENST00000535916 IFT43Q96FT9 208 aa10.07□□□□□ -0.8
VBP1-203ENST00000535916 PRIMPOLQ96LW4 560 aa10.07□□□□□ -0.8
VBP1-203ENST00000535916 OPLAHO14841 1288 aa10.06□□□□□ -0.8
VBP1-203ENST00000535916 SASH3O75995 380 aa10.06□□□□□ -0.8
VBP1-203ENST00000535916 SELPP16109 830 aa10.06□□□□□ -0.8
VBP1-203ENST00000535916 DHX32Q7L7V1 743 aaKnown RBP10.06□□□□□ -0.8
VBP1-203ENST00000535916 ZMIZ1Q9ULJ6 1067 aa10.06□□□□□ -0.8
VBP1-203ENST00000535916 ZBTB42B2RXF5 422 aa10.05□□□□□ -0.8
VBP1-203ENST00000535916 PRMT3O60678 531 aa10.05□□□□□ -0.8
VBP1-203ENST00000535916 ELNP15502 786 aa10.05□□□□□ -0.8
VBP1-203ENST00000535916 RAC1P63000 192 aa10.05□□□□□ -0.8
VBP1-203ENST00000535916 MLLT1Q03111 559 aaPredicted RBP10.05□□□□□ -0.8
VBP1-203ENST00000535916 LPIN3Q9BQK8 851 aa10.05□□□□□ -0.8
VBP1-203ENST00000535916 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.05□□□□□ -0.8
VBP1-203ENST00000535916 RTCBQ9Y3I0 505 aaKnown RBP10.05□□□□□ -0.8
VBP1-203ENST00000535916 RARAP10276 462 aa10.04□□□□□ -0.8
VBP1-203ENST00000535916 NKAPLQ5M9Q1 402 aa10.04□□□□□ -0.8
VBP1-203ENST00000535916 COX20Q5RI15 118 aa10.04□□□□□ -0.8
VBP1-203ENST00000535916 PERM1Q5SV97 790 aa10.04□□□□□ -0.8
VBP1-203ENST00000535916 SHISA2Q6UWI4 295 aa10.04□□□□□ -0.8
VBP1-203ENST00000535916 TREML1Q86YW5 311 aa10.04□□□□□ -0.8
VBP1-203ENST00000535916 DMRTC2Q8IXT2 367 aaPredicted RBP10.04□□□□□ -0.8
VBP1-203ENST00000535916 STK32AQ8WU08 396 aa10.04□□□□□ -0.8
VBP1-203ENST00000535916 ACIN1Q9UKV3 1341 aaKnown RBP10.04□□□□□ -0.8
VBP1-203ENST00000535916 C9orf172C9J069 976 aa10.03□□□□□ -0.8
VBP1-203ENST00000535916 PLAURQ03405 335 aa10.03□□□□□ -0.8
VBP1-203ENST00000535916 MBTPS1Q14703 1052 aa10.03□□□□□ -0.8
VBP1-203ENST00000535916 PCSK7Q16549 785 aa10.03□□□□□ -0.8
VBP1-203ENST00000535916 SWI5Q1ZZU3 235 aa10.03□□□□□ -0.8
VBP1-203ENST00000535916 ILDR2Q71H61 639 aa10.03□□□□□ -0.8
VBP1-203ENST00000535916 TRPM4Q8TD43 1214 aa10.03□□□□□ -0.8
VBP1-203ENST00000535916 KRTAP9-9Q9BYP9 154 aa10.03□□□□□ -0.8
VBP1-203ENST00000535916 KRTAP9-4Q9BYQ2 154 aa10.03□□□□□ -0.8
VBP1-203ENST00000535916 C11orf16Q9NQ32 467 aa10.03□□□□□ -0.8
VBP1-203ENST00000535916 GPLD1P80108 840 aa10.02□□□□□ -0.81
VBP1-203ENST00000535916 ADGRE1Q14246 886 aa10.02□□□□□ -0.81
VBP1-203ENST00000535916 OCLNQ16625 522 aa10.02□□□□□ -0.81
VBP1-203ENST00000535916 RGL4Q8IZJ4 473 aa10.02□□□□□ -0.81
VBP1-203ENST00000535916 FMR1NBQ8N0W7 255 aaPredicted RBP10.02□□□□□ -0.81
VBP1-203ENST00000535916 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.01□□□□□ -0.81
VBP1-203ENST00000535916 FAM69CQ0P6D2 419 aa10.01□□□□□ -0.81
VBP1-203ENST00000535916 ELOAQ14241 798 aaKnown RBP10.01□□□□□ -0.81
VBP1-203ENST00000535916 GRIK5Q16478 980 aa10.01□□□□□ -0.81
VBP1-203ENST00000535916 SAP130Q9H0E3 1048 aa10.01□□□□□ -0.81
VBP1-203ENST00000535916 FRRS1LQ9P0K9 344 aa10.01□□□□□ -0.81
VBP1-203ENST00000535916 DYRK3O43781 588 aa10□□□□□ -0.81
VBP1-203ENST00000535916 XYLBO75191 536 aa10□□□□□ -0.81
VBP1-203ENST00000535916 MSL1Q68DK7 614 aa10□□□□□ -0.81
VBP1-203ENST00000535916 ELMSAN1Q6PJG2 1045 aa10□□□□□ -0.81
VBP1-203ENST00000535916 HFE2Q6ZVN8 426 aa10□□□□□ -0.81
VBP1-203ENST00000535916 CMTR1Q8N1G2 835 aaKnown RBP10□□□□□ -0.81
VBP1-203ENST00000535916 LENG1Q96BZ8 264 aaPredicted RBP10□□□□□ -0.81
VBP1-203ENST00000535916 EGFRP00533 1210 aa9.99□□□□□ -0.81
VBP1-203ENST00000535916 SRPK2P78362 688 aaKnown RBP9.99□□□□□ -0.81
VBP1-203ENST00000535916 KRTAP4-8A0A0G2JLE6 195 aa9.98□□□□□ -0.81
VBP1-203ENST00000535916 NRLP54845 237 aa9.98□□□□□ -0.81
VBP1-203ENST00000535916 CAPN12Q6ZSI9 719 aa9.98□□□□□ -0.81
VBP1-203ENST00000535916 TXNRD3Q86VQ6 643 aa9.98□□□□□ -0.81
VBP1-203ENST00000535916 ETFBKMTQ8IXQ9 262 aa9.98□□□□□ -0.81
VBP1-203ENST00000535916 SMG9Q9H0W8 520 aaKnown RBP9.98□□□□□ -0.81
VBP1-203ENST00000535916 TLR7Q9NYK1 1049 aaKnown RBP9.98□□□□□ -0.81
VBP1-203ENST00000535916 KCNMB2Q9Y691 235 aa9.98□□□□□ -0.81
VBP1-203ENST00000535916 EIF2AK2P19525 551 aaKnown RBP9.97□□□□□ -0.81
VBP1-203ENST00000535916 FAM26DQ5JW98 314 aa9.97□□□□□ -0.81
VBP1-203ENST00000535916 ZMYM1Q5SVZ6 1142 aa9.97□□□□□ -0.81
VBP1-203ENST00000535916 C16orf46Q6P387 395 aa9.97□□□□□ -0.81
VBP1-203ENST00000535916 MKNK1Q9BUB5 465 aa9.97□□□□□ -0.81
VBP1-203ENST00000535916 ARID4AP29374 1257 aaPredicted RBP9.96□□□□□ -0.82
VBP1-203ENST00000535916 NRG1Q02297 640 aaPredicted RBP9.96□□□□□ -0.82
VBP1-203ENST00000535916 WFDC8Q8IUA0 241 aa9.96□□□□□ -0.82
VBP1-203ENST00000535916 TTC9Q92623 222 aa9.96□□□□□ -0.82
VBP1-203ENST00000535916 USP21Q9UK80 565 aa9.96□□□□□ -0.82
VBP1-203ENST00000535916 MMP20O60882 483 aa9.95□□□□□ -0.82
VBP1-203ENST00000535916 ATG7O95352 703 aa9.95□□□□□ -0.82
VBP1-203ENST00000535916 FOXD4L6Q3SYB3 417 aaPredicted RBP9.95□□□□□ -0.82
VBP1-203ENST00000535916 TMEM164Q5U3C3 297 aa9.95□□□□□ -0.82
VBP1-203ENST00000535916 FOXD4L3Q6VB84 417 aaPredicted RBP9.95□□□□□ -0.82
VBP1-203ENST00000535916 FBXO11Q86XK2 927 aa9.95□□□□□ -0.82
VBP1-203ENST00000535916 DTWD1Q8N5C7 304 aa9.95□□□□□ -0.82
VBP1-203ENST00000535916 CXXC1Q9P0U4 656 aaPredicted RBP9.95□□□□□ -0.82
VBP1-203ENST00000535916 J3QW42 95 aa9.94□□□□□ -0.82
VBP1-203ENST00000535916 TNFRSF10BO14763 440 aa9.94□□□□□ -0.82
VBP1-203ENST00000535916 BRD2P25440 801 aaKnown RBP9.94□□□□□ -0.82
VBP1-203ENST00000535916 TRIP4Q15650 581 aaPredicted RBP9.94□□□□□ -0.82
VBP1-203ENST00000535916 COL26A1Q96A83 441 aa9.94□□□□□ -0.82
VBP1-203ENST00000535916 NSUN5Q96P11 429 aaKnown RBP9.94□□□□□ -0.82
VBP1-203ENST00000535916 PSAPP07602 524 aa9.93□□□□□ -0.82
VBP1-203ENST00000535916 PRSS36Q5K4E3 855 aa9.93□□□□□ -0.82
VBP1-203ENST00000535916 PLD4Q96BZ4 506 aa9.93□□□□□ -0.82
VBP1-203ENST00000535916 LOC102724428A0A0B4J2F2 783 aa9.92□□□□□ -0.82
VBP1-203ENST00000535916 SIK1P57059 783 aa9.92□□□□□ -0.82
VBP1-203ENST00000535916 NAA30Q147X3 362 aaPredicted RBP9.92□□□□□ -0.82
VBP1-203ENST00000535916 DEAF1O75398 565 aaPredicted RBP9.91□□□□□ -0.82
VBP1-203ENST00000535916 TP53INP1Q96A56 240 aa9.91□□□□□ -0.82
VBP1-203ENST00000535916 SSBP4Q9BWG4 385 aaPredicted RBP9.91□□□□□ -0.82
VBP1-203ENST00000535916 H2AFB1P0C5Y9 115 aa9.9□□□□□ -0.82
VBP1-203ENST00000535916 H2AFB2P0C5Z0 115 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms