RNA–Protein interactions for RNA: ENST00000535143.1

MSRB3-204, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 419 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-204ENST00000535143 MAPK8IP3Q9UPT6 1336 aa22.52■■□□□ 1.2
MSRB3-204ENST00000535143 HIRAP54198 1017 aaPredicted RBP22.51■■□□□ 1.19
MSRB3-204ENST00000535143 CIAPIN1Q6FI81 312 aa22.51■■□□□ 1.19
MSRB3-204ENST00000535143 SUPT20HQ8NEM7 779 aa22.51■■□□□ 1.19
MSRB3-204ENST00000535143 RTFDC1Q9BY42 306 aaPredicted RBP22.51■■□□□ 1.19
MSRB3-204ENST00000535143 DUOX1Q9NRD9 1551 aa22.5■■□□□ 1.19
MSRB3-204ENST00000535143 SLC10A5Q5PT55 438 aa22.5■■□□□ 1.19
MSRB3-204ENST00000535143 MPNDQ8N594 471 aa22.5■■□□□ 1.19
MSRB3-204ENST00000535143 MAP2K2P36507 400 aa22.49■■□□□ 1.19
MSRB3-204ENST00000535143 AIMP1Q12904 312 aaKnown RBP22.49■■□□□ 1.19
MSRB3-204ENST00000535143 DLK2Q6UY11 383 aa22.49■■□□□ 1.19
MSRB3-204ENST00000535143 CFAP44Q96MT7 982 aa22.49■■□□□ 1.19
MSRB3-204ENST00000535143 YDJCA8MPS7 323 aa22.48■■□□□ 1.19
MSRB3-204ENST00000535143 SLC34A2O95436 690 aa22.48■■□□□ 1.19
MSRB3-204ENST00000535143 KIAA2012Q0VF49 1180 aa22.48■■□□□ 1.19
MSRB3-204ENST00000535143 SP8Q8IXZ3 490 aa22.48■■□□□ 1.19
MSRB3-204ENST00000535143 VPS33BQ9H267 617 aa22.48■■□□□ 1.19
MSRB3-204ENST00000535143 MLLT1Q03111 559 aaPredicted RBP22.47■■□□□ 1.19
MSRB3-204ENST00000535143 NLRP10Q86W26 655 aa22.47■■□□□ 1.19
MSRB3-204ENST00000535143 XAGE3Q8WTP9 111 aa22.47■■□□□ 1.19
MSRB3-204ENST00000535143 ZIC5Q96T25 663 aa22.47■■□□□ 1.19
MSRB3-204ENST00000535143 MCOLN1Q9GZU1 580 aa22.47■■□□□ 1.19
MSRB3-204ENST00000535143 BBOX1O75936 387 aa22.46■■□□□ 1.19
MSRB3-204ENST00000535143 DDX46Q7L014 1031 aaKnown RBP22.46■■□□□ 1.19
MSRB3-204ENST00000535143 COPS6Q7L5N1 327 aa22.46■■□□□ 1.19
MSRB3-204ENST00000535143 LRRC37AA6NMS7 1700 aa22.45■■□□□ 1.19
MSRB3-204ENST00000535143 DDX60Q8IY21 1712 aaKnown RBP22.45■■□□□ 1.19
MSRB3-204ENST00000535143 GRAPQ13588 217 aa22.45■■□□□ 1.18
MSRB3-204ENST00000535143 GRAPLQ8TC17 118 aaPredicted RBP22.45■■□□□ 1.18
MSRB3-204ENST00000535143 PGAP2Q9UHJ9 254 aa22.45■■□□□ 1.18
MSRB3-204ENST00000535143 TRMT112Q9UI30 125 aaKnown RBP22.45■■□□□ 1.18
MSRB3-204ENST00000535143 CNOT7Q9UIV1 285 aaKnown RBP22.45■■□□□ 1.18
MSRB3-204ENST00000535143 ZBTB12Q9Y330 459 aaPredicted RBP22.45■■□□□ 1.18
MSRB3-204ENST00000535143 COL4A1P02462 1669 aa22.44■■□□□ 1.18
MSRB3-204ENST00000535143 POLR2AP24928 1970 aaKnown RBP22.44■■□□□ 1.18
MSRB3-204ENST00000535143 BRPF1P55201 1214 aaPredicted RBP22.44■■□□□ 1.18
MSRB3-204ENST00000535143 TNIP1Q15025 636 aa22.44■■□□□ 1.18
MSRB3-204ENST00000535143 MICALL2Q8IY33 904 aa22.44■■□□□ 1.18
MSRB3-204ENST00000535143 CDHR2Q9BYE9 1310 aa22.44■■□□□ 1.18
MSRB3-204ENST00000535143 SH3TC1Q8TE82 1336 aa22.43■■□□□ 1.18
MSRB3-204ENST00000535143 RIPK4P57078 832 aa22.43■■□□□ 1.18
MSRB3-204ENST00000535143 HSP90AB3PQ58FF7 597 aa22.43■■□□□ 1.18
MSRB3-204ENST00000535143 CDC37L1Q7L3B6 337 aa22.43■■□□□ 1.18
MSRB3-204ENST00000535143 USP48Q86UV5 1035 aa22.43■■□□□ 1.18
MSRB3-204ENST00000535143 KRT24Q2M2I5 525 aa22.42■■□□□ 1.18
MSRB3-204ENST00000535143 SAMD7Q7Z3H4 446 aa22.42■■□□□ 1.18
MSRB3-204ENST00000535143 HHIPL1Q96JK4 782 aa22.42■■□□□ 1.18
MSRB3-204ENST00000535143 DBNDD1Q9H9R9 158 aa22.42■■□□□ 1.18
MSRB3-204ENST00000535143 CA12O43570 354 aa22.41■■□□□ 1.18
MSRB3-204ENST00000535143 RGS19P49795 217 aa22.41■■□□□ 1.18
MSRB3-204ENST00000535143 HUNKP57058 714 aa22.41■■□□□ 1.18
MSRB3-204ENST00000535143 TCIRG1Q13488 830 aa22.41■■□□□ 1.18
MSRB3-204ENST00000535143 DGKZQ13574 1117 aa22.41■■□□□ 1.18
MSRB3-204ENST00000535143 ZC3H15Q8WU90 426 aaKnown RBP22.41■■□□□ 1.18
MSRB3-204ENST00000535143 H7C1D1 291 aa22.4■■□□□ 1.18
MSRB3-204ENST00000535143 PSMD14O00487 310 aa22.4■■□□□ 1.18
MSRB3-204ENST00000535143 EGFRP00533 1210 aa22.4■■□□□ 1.18
MSRB3-204ENST00000535143 TBC1D10BQ4KMP7 808 aaPredicted RBP22.4■■□□□ 1.18
MSRB3-204ENST00000535143 PNNQ9H307 717 aaKnown RBP22.4■■□□□ 1.18
MSRB3-204ENST00000535143 RIMBP2O15034 1052 aa22.39■■□□□ 1.17
MSRB3-204ENST00000535143 CELF1Q92879 486 aaKnown RBP22.39■■□□□ 1.17
MSRB3-204ENST00000535143 ADM5C9JUS6 153 aa22.38■■□□□ 1.17
MSRB3-204ENST00000535143 NOGQ13253 232 aa22.37■■□□□ 1.17
MSRB3-204ENST00000535143 RBM26Q5T8P6 1007 aaKnown RBP22.37■■□□□ 1.17
MSRB3-204ENST00000535143 KCNQ5Q9NR82 932 aa22.37■■□□□ 1.17
MSRB3-204ENST00000535143 CHPF2Q9P2E5 772 aa22.37■■□□□ 1.17
MSRB3-204ENST00000535143 NSFL1CQ9UNZ2 370 aaKnown RBP22.37■■□□□ 1.17
MSRB3-204ENST00000535143 SCN9AQ15858 1988 aa22.36■■□□□ 1.17
MSRB3-204ENST00000535143 TMPOP42166 694 aaKnown RBP22.36■■□□□ 1.17
MSRB3-204ENST00000535143 WASHC4Q2M389 1173 aa22.36■■□□□ 1.17
MSRB3-204ENST00000535143 RTL5Q5HYW3 569 aaPredicted RBP22.36■■□□□ 1.17
MSRB3-204ENST00000535143 KRT26Q7Z3Y9 468 aa22.36■■□□□ 1.17
MSRB3-204ENST00000535143 RTL9Q8NET4 1388 aa22.36■■□□□ 1.17
MSRB3-204ENST00000535143 ATP5J2-PTCD1G3V325 749 aa22.35■■□□□ 1.17
MSRB3-204ENST00000535143 C6orf229H3BNL8 230 aa22.35■■□□□ 1.17
MSRB3-204ENST00000535143 GPSM2P81274 684 aa22.35■■□□□ 1.17
MSRB3-204ENST00000535143 NEUROD2Q15784 382 aa22.35■■□□□ 1.17
MSRB3-204ENST00000535143 DOK7Q18PE1 504 aa22.35■■□□□ 1.17
MSRB3-204ENST00000535143 FAM89AQ96GI7 184 aa22.35■■□□□ 1.17
MSRB3-204ENST00000535143 POLLQ9UGP5 575 aa22.35■■□□□ 1.17
MSRB3-204ENST00000535143 FAM155AB1AL88 458 aaPredicted RBP22.34■■□□□ 1.17
MSRB3-204ENST00000535143 ECE2O60344 883 aa22.34■■□□□ 1.17
MSRB3-204ENST00000535143 RGMBQ6NW40 437 aa22.34■■□□□ 1.17
MSRB3-204ENST00000535143 CCDC146Q8IYE0 955 aa22.34■■□□□ 1.17
MSRB3-204ENST00000535143 GBA2Q9HCG7 927 aaPredicted RBP22.34■■□□□ 1.17
MSRB3-204ENST00000535143 BABAM1Q9NWV8 329 aa22.34■■□□□ 1.17
MSRB3-204ENST00000535143 LAS1LQ9Y4W2 734 aaKnown RBP22.34■■□□□ 1.17
MSRB3-204ENST00000535143 TMC4Q7Z404 712 aa22.33■■□□□ 1.17
MSRB3-204ENST00000535143 DPF2Q92785 391 aa22.33■■□□□ 1.17
MSRB3-204ENST00000535143 LMOD3Q0VAK6 560 aa22.32■■□□□ 1.16
MSRB3-204ENST00000535143 ASTN2O75129 1339 aaPredicted RBP22.31■■□□□ 1.16
MSRB3-204ENST00000535143 AKAP11Q9UKA4 1901 aa22.31■■□□□ 1.16
MSRB3-204ENST00000535143 KIF23Q02241 960 aaPredicted RBP22.31■■□□□ 1.16
MSRB3-204ENST00000535143 HDGFL1Q5TGJ6 251 aa22.31■■□□□ 1.16
MSRB3-204ENST00000535143 DCPSQ96C86 337 aaKnown RBP22.31■■□□□ 1.16
MSRB3-204ENST00000535143 ISCA1Q9BUE6 129 aa22.31■■□□□ 1.16
MSRB3-204ENST00000535143 SF3B3Q15393 1217 aaKnown RBP22.3■■□□□ 1.16
MSRB3-204ENST00000535143 KIF4BQ2VIQ3 1234 aa22.3■■□□□ 1.16
MSRB3-204ENST00000535143 C2orf69Q8N8R5 385 aa22.3■■□□□ 1.16
MSRB3-204ENST00000535143 PLBD2Q8NHP8 589 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms