RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 SUSD4Q5VX71 490 aa13.17□□□□□ -0.3
CLSTN3-203ENST00000534830 RPGRQ92834 1020 aaKnown RBP13.17□□□□□ -0.3
CLSTN3-203ENST00000534830 ZBTB3Q9H5J0 574 aa13.17□□□□□ -0.3
CLSTN3-203ENST00000534830 NTSR2O95665 410 aa13.16□□□□□ -0.3
CLSTN3-203ENST00000534830 HUNKP57058 714 aa13.16□□□□□ -0.3
CLSTN3-203ENST00000534830 KRT24Q2M2I5 525 aa13.16□□□□□ -0.3
CLSTN3-203ENST00000534830 GRIPAP1Q4V328 841 aa13.16□□□□□ -0.3
CLSTN3-203ENST00000534830 NUTM1Q86Y26 1132 aa13.16□□□□□ -0.3
CLSTN3-203ENST00000534830 ANXA1P04083 346 aa13.15□□□□□ -0.3
CLSTN3-203ENST00000534830 ZNF853P0CG23 659 aa13.15□□□□□ -0.3
CLSTN3-203ENST00000534830 HOXA10P31260 410 aaPredicted RBP13.15□□□□□ -0.3
CLSTN3-203ENST00000534830 GMPSP49915 693 aaPredicted RBP13.15□□□□□ -0.3
CLSTN3-203ENST00000534830 AOC3Q16853 763 aa13.15□□□□□ -0.3
CLSTN3-203ENST00000534830 CDC37L1Q7L3B6 337 aa13.15□□□□□ -0.3
CLSTN3-203ENST00000534830 SLC51AQ86UW1 340 aa13.15□□□□□ -0.3
CLSTN3-203ENST00000534830 PPEF1O14829 653 aaPredicted RBP13.14□□□□□ -0.31
CLSTN3-203ENST00000534830 TRPA1O75762 1119 aa13.14□□□□□ -0.31
CLSTN3-203ENST00000534830 HOXB7P09629 217 aa13.14□□□□□ -0.31
CLSTN3-203ENST00000534830 GPTP24298 496 aa13.14□□□□□ -0.31
CLSTN3-203ENST00000534830 CXCL9Q07325 125 aa13.14□□□□□ -0.31
CLSTN3-203ENST00000534830 PARP10Q53GL7 1025 aa13.14□□□□□ -0.31
CLSTN3-203ENST00000534830 SLC10A5Q5PT55 438 aa13.14□□□□□ -0.31
CLSTN3-203ENST00000534830 COPS6Q7L5N1 327 aa13.14□□□□□ -0.31
CLSTN3-203ENST00000534830 BCL2L13Q9BXK5 485 aa13.14□□□□□ -0.31
CLSTN3-203ENST00000534830 TMX4Q9H1E5 349 aaPredicted RBP13.14□□□□□ -0.31
CLSTN3-203ENST00000534830 SAGE1Q9NXZ1 904 aa13.14□□□□□ -0.31
CLSTN3-203ENST00000534830 LAMB2P55268 1798 aa13.14□□□□□ -0.31
CLSTN3-203ENST00000534830 PPP1R42Q7Z4L9 355 aa13.13□□□□□ -0.31
CLSTN3-203ENST00000534830 USP48Q86UV5 1035 aa13.13□□□□□ -0.31
CLSTN3-203ENST00000534830 ZC3H15Q8WU90 426 aaKnown RBP13.13□□□□□ -0.31
CLSTN3-203ENST00000534830 PGAP2Q9UHJ9 254 aa13.13□□□□□ -0.31
CLSTN3-203ENST00000534830 ZNRF3Q9ULT6 936 aa13.13□□□□□ -0.31
CLSTN3-203ENST00000534830 AKAP11Q9UKA4 1901 aa13.13□□□□□ -0.31
CLSTN3-203ENST00000534830 HIRAP54198 1017 aaPredicted RBP13.12□□□□□ -0.31
CLSTN3-203ENST00000534830 KIF23Q02241 960 aaPredicted RBP13.12□□□□□ -0.31
CLSTN3-203ENST00000534830 RGMBQ6NW40 437 aa13.12□□□□□ -0.31
CLSTN3-203ENST00000534830 CTU1Q7Z7A3 348 aaKnown RBP13.12□□□□□ -0.31
CLSTN3-203ENST00000534830 TRPM4Q8TD43 1214 aa13.12□□□□□ -0.31
CLSTN3-203ENST00000534830 XAGE3Q8WTP9 111 aa13.12□□□□□ -0.31
CLSTN3-203ENST00000534830 NECTIN2Q92692 538 aa13.12□□□□□ -0.31
CLSTN3-203ENST00000534830 RBM17Q96I25 401 aaKnown RBP13.12□□□□□ -0.31
CLSTN3-203ENST00000534830 CRAMP1Q96RY5 1269 aa13.12□□□□□ -0.31
CLSTN3-203ENST00000534830 RNF186Q9NXI6 227 aa13.12□□□□□ -0.31
CLSTN3-203ENST00000534830 LAS1LQ9Y4W2 734 aaKnown RBP13.12□□□□□ -0.31
CLSTN3-203ENST00000534830 FAM155AB1AL88 458 aaPredicted RBP13.11□□□□□ -0.31
CLSTN3-203ENST00000534830 APAF1O14727 1248 aa13.11□□□□□ -0.31
CLSTN3-203ENST00000534830 RAD17O75943 681 aa13.11□□□□□ -0.31
CLSTN3-203ENST00000534830 TCIRG1Q13488 830 aa13.11□□□□□ -0.31
CLSTN3-203ENST00000534830 DLK2Q6UY11 383 aa13.11□□□□□ -0.31
CLSTN3-203ENST00000534830 C3orf67Q6ZVT6 689 aa13.11□□□□□ -0.31
CLSTN3-203ENST00000534830 CCDC102AQ96A19 550 aa13.11□□□□□ -0.31
CLSTN3-203ENST00000534830 GCC1Q96CN9 775 aa13.11□□□□□ -0.31
CLSTN3-203ENST00000534830 UTP14AQ9BVJ6 771 aaKnown RBP13.11□□□□□ -0.31
CLSTN3-203ENST00000534830 MBIPQ9NS73 344 aa13.11□□□□□ -0.31
CLSTN3-203ENST00000534830 ZNF157P51786 506 aaPredicted RBP13.1□□□□□ -0.31
CLSTN3-203ENST00000534830 AIMP1Q12904 312 aaKnown RBP13.1□□□□□ -0.31
CLSTN3-203ENST00000534830 TNIP1Q15025 636 aa13.1□□□□□ -0.31
CLSTN3-203ENST00000534830 CCDC184Q52MB2 194 aa13.1□□□□□ -0.31
CLSTN3-203ENST00000534830 HSP90AB3PQ58FF7 597 aa13.1□□□□□ -0.31
CLSTN3-203ENST00000534830 NLRP10Q86W26 655 aa13.1□□□□□ -0.31
CLSTN3-203ENST00000534830 C2orf69Q8N8R5 385 aa13.1□□□□□ -0.31
CLSTN3-203ENST00000534830 VPS33BQ9H267 617 aa13.1□□□□□ -0.31
CLSTN3-203ENST00000534830 IFT57Q9NWB7 429 aa13.1□□□□□ -0.31
CLSTN3-203ENST00000534830 CHPF2Q9P2E5 772 aa13.1□□□□□ -0.31
CLSTN3-203ENST00000534830 CNOT7Q9UIV1 285 aaKnown RBP13.1□□□□□ -0.31
CLSTN3-203ENST00000534830 HPS5Q9UPZ3 1129 aa13.1□□□□□ -0.31
CLSTN3-203ENST00000534830 SHTN1A0MZ66 631 aa13.09□□□□□ -0.31
CLSTN3-203ENST00000534830 H7C1D1 291 aa13.09□□□□□ -0.31
CLSTN3-203ENST00000534830 TAF1P21675 1872 aa13.09□□□□□ -0.31
CLSTN3-203ENST00000534830 ZEB1P37275 1124 aaPredicted RBP13.09□□□□□ -0.31
CLSTN3-203ENST00000534830 HDGFL1Q5TGJ6 251 aa13.09□□□□□ -0.31
CLSTN3-203ENST00000534830 DUSP27Q5VZP5 1158 aa13.09□□□□□ -0.31
CLSTN3-203ENST00000534830 DDX60Q8IY21 1712 aaKnown RBP13.09□□□□□ -0.31
CLSTN3-203ENST00000534830 SUPT20HQ8NEM7 779 aa13.09□□□□□ -0.31
CLSTN3-203ENST00000534830 PLBD2Q8NHP8 589 aa13.09□□□□□ -0.31
CLSTN3-203ENST00000534830 NLRP3Q96P20 1036 aa13.09□□□□□ -0.31
CLSTN3-203ENST00000534830 GBA2Q9HCG7 927 aaPredicted RBP13.09□□□□□ -0.31
CLSTN3-203ENST00000534830 DBF4Q9UBU7 674 aaPredicted RBP13.09□□□□□ -0.31
CLSTN3-203ENST00000534830 CDHR2Q9BYE9 1310 aa13.09□□□□□ -0.31
CLSTN3-203ENST00000534830 POLR2AP24928 1970 aaKnown RBP13.09□□□□□ -0.31
CLSTN3-203ENST00000534830 ANKRD13DQ6ZTN6 518 aa13.08□□□□□ -0.32
CLSTN3-203ENST00000534830 KRT26Q7Z3Y9 468 aa13.08□□□□□ -0.32
CLSTN3-203ENST00000534830 ISCA1Q9BUE6 129 aa13.08□□□□□ -0.32
CLSTN3-203ENST00000534830 GNAI1P63096 354 aa13.07□□□□□ -0.32
CLSTN3-203ENST00000534830 DPP8Q6V1X1 898 aaPredicted RBP13.07□□□□□ -0.32
CLSTN3-203ENST00000534830 MICALL2Q8IY33 904 aa13.07□□□□□ -0.32
CLSTN3-203ENST00000534830 HYPKQ9NX55 129 aa13.07□□□□□ -0.32
CLSTN3-203ENST00000534830 ATP6V0A2Q9Y487 856 aa13.07□□□□□ -0.32
CLSTN3-203ENST00000534830 CALD1Q05682 793 aaKnown RBP13.06□□□□□ -0.32
CLSTN3-203ENST00000534830 TRIM28Q13263 835 aaKnown RBP13.06□□□□□ -0.32
CLSTN3-203ENST00000534830 SAMD7Q7Z3H4 446 aa13.06□□□□□ -0.32
CLSTN3-203ENST00000534830 CSRNP1Q96S65 589 aa13.06□□□□□ -0.32
CLSTN3-203ENST00000534830 HDAC9Q9UKV0 1011 aa13.06□□□□□ -0.32
CLSTN3-203ENST00000534830 ABCC4O15439 1325 aa13.06□□□□□ -0.32
CLSTN3-203ENST00000534830 ADM5C9JUS6 153 aa13.05□□□□□ -0.32
CLSTN3-203ENST00000534830 HCLS1P14317 486 aaPredicted RBP13.05□□□□□ -0.32
CLSTN3-203ENST00000534830 KIAA2012Q0VF49 1180 aa13.05□□□□□ -0.32
CLSTN3-203ENST00000534830 PKN2Q16513 984 aaKnown RBP13.05□□□□□ -0.32
CLSTN3-203ENST00000534830 CCDC27Q2M243 656 aa13.05□□□□□ -0.32
CLSTN3-203ENST00000534830 TBC1D10BQ4KMP7 808 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms