RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 CEP126Q9P2H0 1117 aa16.19■□□□□ 0.18
BEST1-208ENST00000534553 TRMT112Q9UI30 125 aaKnown RBP16.19■□□□□ 0.18
BEST1-208ENST00000534553 ZNF652Q9Y2D9 606 aa16.19■□□□□ 0.18
BEST1-208ENST00000534553 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.19■□□□□ 0.18
BEST1-208ENST00000534553 ZNF609O15014 1411 aa16.19■□□□□ 0.18
BEST1-208ENST00000534553 CTSWP56202 376 aa16.19■□□□□ 0.18
BEST1-208ENST00000534553 TAF7LQ5H9L4 462 aa16.19■□□□□ 0.18
BEST1-208ENST00000534553 HAUS7Q99871 368 aa16.19■□□□□ 0.18
BEST1-208ENST00000534553 FSD1Q9BTV5 496 aa16.19■□□□□ 0.18
BEST1-208ENST00000534553 LSG1Q9H089 658 aaKnown RBP16.19■□□□□ 0.18
BEST1-208ENST00000534553 CD2BP2O95400 341 aaKnown RBP16.18■□□□□ 0.18
BEST1-208ENST00000534553 NUP98P52948 1817 aa16.18■□□□□ 0.18
BEST1-208ENST00000534553 IRS4O14654 1257 aaPredicted RBP16.17■□□□□ 0.18
BEST1-208ENST00000534553 GPTP24298 496 aa16.17■□□□□ 0.18
BEST1-208ENST00000534553 CLEC4GQ6UXB4 293 aa16.17■□□□□ 0.18
BEST1-208ENST00000534553 DBNDD2Q9BQY9 259 aa16.17■□□□□ 0.18
BEST1-208ENST00000534553 CWC22Q9HCG8 908 aaKnown RBP16.17■□□□□ 0.18
BEST1-208ENST00000534553 TBC1D2BQ9UPU7 963 aa16.17■□□□□ 0.18
BEST1-208ENST00000534553 COL5A3P25940 1745 aaPredicted RBP16.17■□□□□ 0.18
BEST1-208ENST00000534553 ABCC12Q96J65 1359 aa16.17■□□□□ 0.18
BEST1-208ENST00000534553 CNTNAP4Q9C0A0 1308 aa16.17■□□□□ 0.18
BEST1-208ENST00000534553 ANKRD18BA2A2Z9 1011 aa16.17■□□□□ 0.18
BEST1-208ENST00000534553 ITPK1Q13572 414 aa16.17■□□□□ 0.18
BEST1-208ENST00000534553 MEX3CQ5U5Q3 659 aaKnown RBP16.17■□□□□ 0.18
BEST1-208ENST00000534553 TTLL11Q8NHH1 800 aa16.17■□□□□ 0.18
BEST1-208ENST00000534553 SPEF2Q9C093 1822 aa16.16■□□□□ 0.18
BEST1-208ENST00000534553 NEK4P51957 841 aa16.16■□□□□ 0.18
BEST1-208ENST00000534553 LRRFIP1Q32MZ4 808 aaKnown RBP16.16■□□□□ 0.18
BEST1-208ENST00000534553 SPRYD3Q8NCJ5 442 aa16.16■□□□□ 0.18
BEST1-208ENST00000534553 CCDC171Q6TFL3 1326 aa16.15■□□□□ 0.18
BEST1-208ENST00000534553 SH3TC1Q8TE82 1336 aa16.15■□□□□ 0.18
BEST1-208ENST00000534553 CAMTA2O94983 1202 aa16.15■□□□□ 0.18
BEST1-208ENST00000534553 LRRC24Q50LG9 513 aa16.15■□□□□ 0.18
BEST1-208ENST00000534553 IL25Q9H293 177 aa16.15■□□□□ 0.18
BEST1-208ENST00000534553 UBN2Q6ZU65 1347 aa16.15■□□□□ 0.18
BEST1-208ENST00000534553 A0A1B0GUL7 405 aa16.15■□□□□ 0.18
BEST1-208ENST00000534553 CCDC158Q5M9N0 1113 aa16.15■□□□□ 0.18
BEST1-208ENST00000534553 GJD4Q96KN9 370 aaPredicted RBP16.15■□□□□ 0.18
BEST1-208ENST00000534553 NEUROD6Q96NK8 337 aa16.15■□□□□ 0.18
BEST1-208ENST00000534553 UTP14AQ9BVJ6 771 aaKnown RBP16.15■□□□□ 0.18
BEST1-208ENST00000534553 NHSQ6T4R5 1651 aa16.15■□□□□ 0.18
BEST1-208ENST00000534553 MED23Q9ULK4 1368 aa16.14■□□□□ 0.17
BEST1-208ENST00000534553 MYH3P11055 1940 aa16.14■□□□□ 0.17
BEST1-208ENST00000534553 KCNQ2O43526 872 aa16.14■□□□□ 0.17
BEST1-208ENST00000534553 ZKSCAN1P17029 563 aaPredicted RBP16.14■□□□□ 0.17
BEST1-208ENST00000534553 ITGA6P23229 1130 aa16.14■□□□□ 0.17
BEST1-208ENST00000534553 RC3H1Q5TC82 1133 aaKnown RBP16.14■□□□□ 0.17
BEST1-208ENST00000534553 RNF20Q5VTR2 975 aa16.14■□□□□ 0.17
BEST1-208ENST00000534553 KBTBD3Q8NAB2 608 aa16.14■□□□□ 0.17
BEST1-208ENST00000534553 KCNB2Q92953 911 aa16.14■□□□□ 0.17
BEST1-208ENST00000534553 ZNF594Q96JF6 807 aaPredicted RBP16.14■□□□□ 0.17
BEST1-208ENST00000534553 TM6SF1Q9BZW5 370 aa16.14■□□□□ 0.17
BEST1-208ENST00000534553 PALD1Q9ULE6 856 aa16.14■□□□□ 0.17
BEST1-208ENST00000534553 FRAT2O75474 233 aaPredicted RBP16.13■□□□□ 0.17
BEST1-208ENST00000534553 PTMSP20962 102 aa16.13■□□□□ 0.17
BEST1-208ENST00000534553 HSPA1LP34931 641 aa16.13■□□□□ 0.17
BEST1-208ENST00000534553 NMIQ13287 307 aaPredicted RBP16.13■□□□□ 0.17
BEST1-208ENST00000534553 TRPC5Q9UL62 973 aaPredicted RBP16.13■□□□□ 0.17
BEST1-208ENST00000534553 RTL9Q8NET4 1388 aa16.13■□□□□ 0.17
BEST1-208ENST00000534553 ONECUT3O60422 494 aaPredicted RBP16.12■□□□□ 0.17
BEST1-208ENST00000534553 NUCB2P80303 420 aa16.12■□□□□ 0.17
BEST1-208ENST00000534553 LDHAL6AQ6ZMR3 332 aa16.12■□□□□ 0.17
BEST1-208ENST00000534553 MAP4K1Q92918 833 aa16.12■□□□□ 0.17
BEST1-208ENST00000534553 HMG20BQ9P0W2 317 aa16.12■□□□□ 0.17
BEST1-208ENST00000534553 LRP5O75197 1615 aa16.12■□□□□ 0.17
BEST1-208ENST00000534553 BCORQ6W2J9 1755 aa16.12■□□□□ 0.17
BEST1-208ENST00000534553 RAB3GAP1Q15042 981 aa16.12■□□□□ 0.17
BEST1-208ENST00000534553 INTS4Q96HW7 963 aaKnown RBP16.12■□□□□ 0.17
BEST1-208ENST00000534553 GBP4Q96PP9 640 aa16.12■□□□□ 0.17
BEST1-208ENST00000534553 GREM2Q9H772 168 aa16.12■□□□□ 0.17
BEST1-208ENST00000534553 PAG1Q9NWQ8 432 aa16.12■□□□□ 0.17
BEST1-208ENST00000534553 SNX14Q9Y5W7 946 aa16.12■□□□□ 0.17
BEST1-208ENST00000534553 ATRNO75882 1429 aa16.11■□□□□ 0.17
BEST1-208ENST00000534553 TIMM10P62072 90 aa16.11■□□□□ 0.17
BEST1-208ENST00000534553 GORABQ5T7V8 394 aa16.11■□□□□ 0.17
BEST1-208ENST00000534553 ZNF512BQ96KM6 892 aaPredicted RBP16.11■□□□□ 0.17
BEST1-208ENST00000534553 DNAJC2Q99543 621 aaKnown RBP16.11■□□□□ 0.17
BEST1-208ENST00000534553 PUS3Q9BZE2 481 aaKnown RBP16.11■□□□□ 0.17
BEST1-208ENST00000534553 RIPOR2Q9Y4F9 1068 aa16.11■□□□□ 0.17
BEST1-208ENST00000534553 MROH5Q6ZUA9 1318 aa16.11■□□□□ 0.17
BEST1-208ENST00000534553 DDX11L8A8MPP1 907 aa16.1■□□□□ 0.17
BEST1-208ENST00000534553 IFIT1P09914 478 aaKnown RBP16.1■□□□□ 0.17
BEST1-208ENST00000534553 NECTIN1Q15223 517 aa16.1■□□□□ 0.17
BEST1-208ENST00000534553 CCDC152Q4G0S7 254 aa16.1■□□□□ 0.17
BEST1-208ENST00000534553 METTL24Q5JXM2 366 aa16.1■□□□□ 0.17
BEST1-208ENST00000534553 SUSD4Q5VX71 490 aa16.1■□□□□ 0.17
BEST1-208ENST00000534553 FAM227BQ96M60 508 aa16.1■□□□□ 0.17
BEST1-208ENST00000534553 CNNM1Q9NRU3 951 aa16.1■□□□□ 0.17
BEST1-208ENST00000534553 NIP7Q9Y221 180 aaKnown RBP eCLIP16.1■□□□□ 0.17
BEST1-208ENST00000534553 AFF2P51816 1311 aa16.1■□□□□ 0.17
BEST1-208ENST00000534553 A0A0D9SFI3 127 aa16.1■□□□□ 0.17
BEST1-208ENST00000534553 PSMA5P28066 241 aa16.1■□□□□ 0.17
BEST1-208ENST00000534553 KCNJ4P48050 445 aa16.1■□□□□ 0.17
BEST1-208ENST00000534553 CUL4AQ13619 759 aa16.1■□□□□ 0.17
BEST1-208ENST00000534553 LINC00116Q8NCU8 138 aa16.1■□□□□ 0.17
BEST1-208ENST00000534553 HELLSQ9NRZ9 838 aa16.1■□□□□ 0.17
BEST1-208ENST00000534553 RIC1Q4ADV7 1423 aa16.1■□□□□ 0.17
BEST1-208ENST00000534553 LAMB2P55268 1798 aa16.09■□□□□ 0.17
BEST1-208ENST00000534553 MYH14Q7Z406 1995 aaKnown RBP16.09■□□□□ 0.17
BEST1-208ENST00000534553 ZFYP08048 801 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms