RNA–Protein interactions for RNA: ENST00000534516.2

NCAM1-218, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 3

Gene NCAM1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-218ENST00000534516 IBTKQ9P2D0 1353 aaPredicted RBP11.26□□□□□ -0.61
NCAM1-218ENST00000534516 TTLL13PA6NNM8 815 aa11.25□□□□□ -0.61
NCAM1-218ENST00000534516 HCLS1P14317 486 aaPredicted RBP11.25□□□□□ -0.61
NCAM1-218ENST00000534516 EXOSC9Q06265 439 aaKnown RBP11.25□□□□□ -0.61
NCAM1-218ENST00000534516 TWISTNBQ3B726 338 aaPredicted RBP11.25□□□□□ -0.61
NCAM1-218ENST00000534516 PARP10Q53GL7 1025 aa11.25□□□□□ -0.61
NCAM1-218ENST00000534516 PPP1R42Q7Z4L9 355 aa11.25□□□□□ -0.61
NCAM1-218ENST00000534516 WDR63Q8IWG1 891 aa11.25□□□□□ -0.61
NCAM1-218ENST00000534516 ISCA1Q9BUE6 129 aa11.25□□□□□ -0.61
NCAM1-218ENST00000534516 GPBP1L1Q9HC44 474 aaPredicted RBP11.25□□□□□ -0.61
NCAM1-218ENST00000534516 HSP90AB3PQ58FF7 597 aa11.24□□□□□ -0.61
NCAM1-218ENST00000534516 RTL5Q5HYW3 569 aaPredicted RBP11.24□□□□□ -0.61
NCAM1-218ENST00000534516 SLC10A5Q5PT55 438 aa11.24□□□□□ -0.61
NCAM1-218ENST00000534516 CCDC30Q5VVM6 783 aa11.24□□□□□ -0.61
NCAM1-218ENST00000534516 JARID2Q92833 1246 aaPredicted RBP11.24□□□□□ -0.61
NCAM1-218ENST00000534516 NMRK2Q9NPI5 230 aa11.24□□□□□ -0.61
NCAM1-218ENST00000534516 KIF3CO14782 793 aa11.23□□□□□ -0.61
NCAM1-218ENST00000534516 VAMP4O75379 141 aa11.23□□□□□ -0.61
NCAM1-218ENST00000534516 LMNB1P20700 586 aa11.23□□□□□ -0.61
NCAM1-218ENST00000534516 GSE1Q14687 1217 aa11.23□□□□□ -0.61
NCAM1-218ENST00000534516 RIC3Q7Z5B4 369 aa11.23□□□□□ -0.61
NCAM1-218ENST00000534516 FAM89AQ96GI7 184 aa11.23□□□□□ -0.61
NCAM1-218ENST00000534516 MYD88Q99836 296 aa11.23□□□□□ -0.61
NCAM1-218ENST00000534516 TRMT112Q9UI30 125 aaKnown RBP11.23□□□□□ -0.61
NCAM1-218ENST00000534516 ZNF521Q96K83 1311 aa11.23□□□□□ -0.61
NCAM1-218ENST00000534516 RIC1Q4ADV7 1423 aa11.23□□□□□ -0.61
NCAM1-218ENST00000534516 SNED1Q8TER0 1413 aa11.23□□□□□ -0.61
NCAM1-218ENST00000534516 HOXA10P31260 410 aaPredicted RBP11.22□□□□□ -0.61
NCAM1-218ENST00000534516 C1QTNF8P60827 252 aa11.22□□□□□ -0.61
NCAM1-218ENST00000534516 GOLGA2Q08379 1002 aa11.22□□□□□ -0.61
NCAM1-218ENST00000534516 RPGRQ92834 1020 aaKnown RBP11.22□□□□□ -0.61
NCAM1-218ENST00000534516 TAOK3Q9H2K8 898 aa11.22□□□□□ -0.61
NCAM1-218ENST00000534516 CACNA1FO60840 1977 aa11.21□□□□□ -0.61
NCAM1-218ENST00000534516 COL4A5P29400 1685 aa11.21□□□□□ -0.61
NCAM1-218ENST00000534516 ABCC4O15439 1325 aa11.21□□□□□ -0.61
NCAM1-218ENST00000534516 SH3TC1Q8TE82 1336 aa11.21□□□□□ -0.61
NCAM1-218ENST00000534516 ALDH1B1P30837 517 aa11.21□□□□□ -0.61
NCAM1-218ENST00000534516 CCDC93Q567U6 631 aa11.21□□□□□ -0.61
NCAM1-218ENST00000534516 SPOCK2Q92563 424 aa11.21□□□□□ -0.61
NCAM1-218ENST00000534516 NLRP3Q96P20 1036 aa11.21□□□□□ -0.61
NCAM1-218ENST00000534516 ZNF277Q9NRM2 450 aaPredicted RBP11.21□□□□□ -0.61
NCAM1-218ENST00000534516 MAP3K2Q9Y2U5 619 aa11.21□□□□□ -0.61
NCAM1-218ENST00000534516 LTBP3Q9NS15 1303 aa11.2□□□□□ -0.62
NCAM1-218ENST00000534516 PI4KAP2A4QPH2 592 aa11.2□□□□□ -0.62
NCAM1-218ENST00000534516 IGKV5-2P06315 115 aa11.2□□□□□ -0.62
NCAM1-218ENST00000534516 PI4KAP1Q8N8J0 262 aa11.2□□□□□ -0.62
NCAM1-218ENST00000534516 OTUD5Q96G74 571 aa11.2□□□□□ -0.62
NCAM1-218ENST00000534516 RBM17Q96I25 401 aaKnown RBP11.2□□□□□ -0.62
NCAM1-218ENST00000534516 CRAMP1Q96RY5 1269 aa11.2□□□□□ -0.62
NCAM1-218ENST00000534516 METTL22Q9BUU2 404 aaPredicted RBP11.2□□□□□ -0.62
NCAM1-218ENST00000534516 RRAGCQ9HB90 399 aa11.2□□□□□ -0.62
NCAM1-218ENST00000534516 RNF123Q5XPI4 1314 aa11.19□□□□□ -0.62
NCAM1-218ENST00000534516 CCER2I3L3R5 266 aa11.19□□□□□ -0.62
NCAM1-218ENST00000534516 PPEF1O14829 653 aaPredicted RBP11.19□□□□□ -0.62
NCAM1-218ENST00000534516 FKBP4Q02790 459 aaKnown RBP eCLIP11.19□□□□□ -0.62
NCAM1-218ENST00000534516 TRIM28Q13263 835 aaKnown RBP11.19□□□□□ -0.62
NCAM1-218ENST00000534516 KSR2Q6VAB6 950 aa11.19□□□□□ -0.62
NCAM1-218ENST00000534516 CDCA7LQ96GN5 454 aa11.19□□□□□ -0.62
NCAM1-218ENST00000534516 TMEM106CQ9BVX2 250 aa11.19□□□□□ -0.62
NCAM1-218ENST00000534516 STK31Q9BXU1 1019 aa11.19□□□□□ -0.62
NCAM1-218ENST00000534516 IRS4O14654 1257 aaPredicted RBP11.18□□□□□ -0.62
NCAM1-218ENST00000534516 FLIIQ13045 1269 aa11.18□□□□□ -0.62
NCAM1-218ENST00000534516 CWF19L2Q2TBE0 894 aaKnown RBP11.18□□□□□ -0.62
NCAM1-218ENST00000534516 SOGA3Q5TF21 947 aa11.18□□□□□ -0.62
NCAM1-218ENST00000534516 DIEXFQ68CQ4 756 aaKnown RBP11.18□□□□□ -0.62
NCAM1-218ENST00000534516 PCDHB8Q9UN66 801 aa11.18□□□□□ -0.62
NCAM1-218ENST00000534516 CEP350Q5VT06 3117 aa11.17□□□□□ -0.62
NCAM1-218ENST00000534516 GLTPD2A6NH11 291 aa11.17□□□□□ -0.62
NCAM1-218ENST00000534516 POTECB2RU33 542 aa11.17□□□□□ -0.62
NCAM1-218ENST00000534516 F6X3S4 739 aa11.17□□□□□ -0.62
NCAM1-218ENST00000534516 DDX58O95786 925 aaKnown RBP11.17□□□□□ -0.62
NCAM1-218ENST00000534516 RTKN2Q8IZC4 609 aa11.17□□□□□ -0.62
NCAM1-218ENST00000534516 ZBTB38Q8NAP3 1195 aaPredicted RBP11.17□□□□□ -0.62
NCAM1-218ENST00000534516 CCDC191Q8NCU4 936 aa11.17□□□□□ -0.62
NCAM1-218ENST00000534516 CELF1Q92879 486 aaKnown RBP11.17□□□□□ -0.62
NCAM1-218ENST00000534516 CCDC85AQ96PX6 553 aaPredicted RBP11.17□□□□□ -0.62
NCAM1-218ENST00000534516 MYH16Q9H6N6 1097 aa11.17□□□□□ -0.62
NCAM1-218ENST00000534516 CWC25Q9NXE8 425 aaPredicted RBP11.17□□□□□ -0.62
NCAM1-218ENST00000534516 SPEF2Q9C093 1822 aa11.16□□□□□ -0.62
NCAM1-218ENST00000534516 KDM2BQ8NHM5 1336 aa11.16□□□□□ -0.62
NCAM1-218ENST00000534516 ZNF541Q9H0D2 1346 aa11.16□□□□□ -0.62
NCAM1-218ENST00000534516 LRRC37AA6NMS7 1700 aa11.16□□□□□ -0.62
NCAM1-218ENST00000534516 WDR90Q96KV7 1748 aa11.16□□□□□ -0.62
NCAM1-218ENST00000534516 MYH3P11055 1940 aa11.16□□□□□ -0.62
NCAM1-218ENST00000534516 NEURL1BA8MQ27 555 aa11.16□□□□□ -0.62
NCAM1-218ENST00000534516 DDNO94850 711 aaPredicted RBP11.16□□□□□ -0.62
NCAM1-218ENST00000534516 IARSP41252 1262 aaKnown RBP11.16□□□□□ -0.62
NCAM1-218ENST00000534516 FKBP5Q13451 457 aaPredicted RBP11.16□□□□□ -0.62
NCAM1-218ENST00000534516 GRAPQ13588 217 aa11.16□□□□□ -0.62
NCAM1-218ENST00000534516 SF3B3Q15393 1217 aaKnown RBP11.16□□□□□ -0.62
NCAM1-218ENST00000534516 GRAPLQ8TC17 118 aaPredicted RBP11.16□□□□□ -0.62
NCAM1-218ENST00000534516 SEC31BQ9NQW1 1179 aa11.16□□□□□ -0.62
NCAM1-218ENST00000534516 ATP6V0A2Q9Y487 856 aa11.16□□□□□ -0.62
NCAM1-218ENST00000534516 DUOX1Q9NRD9 1551 aa11.16□□□□□ -0.62
NCAM1-218ENST00000534516 POTEFA5A3E0 1075 aa11.15□□□□□ -0.62
NCAM1-218ENST00000534516 PCCAP05165 728 aaPredicted RBP11.15□□□□□ -0.62
NCAM1-218ENST00000534516 POTEJP0CG39 1038 aa11.15□□□□□ -0.62
NCAM1-218ENST00000534516 SLFN5Q08AF3 891 aa11.15□□□□□ -0.62
NCAM1-218ENST00000534516 DDX46Q7L014 1031 aaKnown RBP11.15□□□□□ -0.62
NCAM1-218ENST00000534516 PSMD1Q99460 953 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms