RNA–Protein interactions for RNA: ENST00000534417.1

TTC17-215, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 2

Gene TTC17, Length 823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-215ENST00000534417 UBE3BQ7Z3V4 1068 aa12.59□□□□□ -0.39
TTC17-215ENST00000534417 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.59□□□□□ -0.39
TTC17-215ENST00000534417 SYAP1Q96A49 352 aaPredicted RBP12.59□□□□□ -0.39
TTC17-215ENST00000534417 PDLIM2Q96JY6 352 aa12.59□□□□□ -0.39
TTC17-215ENST00000534417 FAM227BQ96M60 508 aa12.59□□□□□ -0.39
TTC17-215ENST00000534417 JAKMIP1Q96N16 626 aaKnown RBP12.59□□□□□ -0.39
TTC17-215ENST00000534417 FSD1Q9BTV5 496 aa12.59□□□□□ -0.39
TTC17-215ENST00000534417 RTN4Q9NQC3 1192 aaKnown RBP12.59□□□□□ -0.39
TTC17-215ENST00000534417 CWC25Q9NXE8 425 aaPredicted RBP12.59□□□□□ -0.39
TTC17-215ENST00000534417 TMEM63CQ9P1W3 806 aa12.59□□□□□ -0.39
TTC17-215ENST00000534417 ATP6V1DQ9Y5K8 247 aa12.59□□□□□ -0.39
TTC17-215ENST00000534417 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.59□□□□□ -0.39
TTC17-215ENST00000534417 SH3TC1Q8TE82 1336 aa12.59□□□□□ -0.39
TTC17-215ENST00000534417 CICQ96RK0 1608 aaPredicted RBP12.59□□□□□ -0.39
TTC17-215ENST00000534417 STX6O43752 255 aa12.58□□□□□ -0.4
TTC17-215ENST00000534417 TAF5LO75529 589 aa12.58□□□□□ -0.4
TTC17-215ENST00000534417 TFCP2Q12800 502 aa12.58□□□□□ -0.4
TTC17-215ENST00000534417 VSIG10Q8N0Z9 540 aa12.58□□□□□ -0.4
TTC17-215ENST00000534417 ISCA1Q9BUE6 129 aa12.58□□□□□ -0.4
TTC17-215ENST00000534417 SLAIN2Q9P270 581 aa12.58□□□□□ -0.4
TTC17-215ENST00000534417 SMC3Q9UQE7 1217 aa12.58□□□□□ -0.4
TTC17-215ENST00000534417 ABCC12Q96J65 1359 aa12.57□□□□□ -0.4
TTC17-215ENST00000534417 TCHHQ07283 1943 aa12.57□□□□□ -0.4
TTC17-215ENST00000534417 PHF14O94880 888 aa12.57□□□□□ -0.4
TTC17-215ENST00000534417 F13A1P00488 732 aa12.57□□□□□ -0.4
TTC17-215ENST00000534417 SYT1P21579 422 aa12.57□□□□□ -0.4
TTC17-215ENST00000534417 RPS6KB1P23443 525 aa12.57□□□□□ -0.4
TTC17-215ENST00000534417 IL15P40933 162 aaPredicted RBP12.57□□□□□ -0.4
TTC17-215ENST00000534417 ST3GAL1Q11201 340 aa12.57□□□□□ -0.4
TTC17-215ENST00000534417 TOM1L2Q6ZVM7 507 aa12.57□□□□□ -0.4
TTC17-215ENST00000534417 ATG9AQ7Z3C6 839 aa12.57□□□□□ -0.4
TTC17-215ENST00000534417 PLA2G12BQ9BX93 195 aa12.57□□□□□ -0.4
TTC17-215ENST00000534417 SIL1Q9H173 461 aa12.57□□□□□ -0.4
TTC17-215ENST00000534417 BOLA2Q9H3K6 86 aa12.57□□□□□ -0.4
TTC17-215ENST00000534417 U3KPZ7 1027 aaPredicted RBP12.57□□□□□ -0.4
TTC17-215ENST00000534417 LAMA4Q16363 1823 aa12.56□□□□□ -0.4
TTC17-215ENST00000534417 ESPNB1AK53 854 aa12.56□□□□□ -0.4
TTC17-215ENST00000534417 LARGE1O95461 756 aa12.56□□□□□ -0.4
TTC17-215ENST00000534417 CSPP1Q1MSJ5 1256 aa12.56□□□□□ -0.4
TTC17-215ENST00000534417 LMBR1LQ6UX01 489 aa12.56□□□□□ -0.4
TTC17-215ENST00000534417 NOL8Q76FK4 1167 aaKnown RBP12.56□□□□□ -0.4
TTC17-215ENST00000534417 KBTBD3Q8NAB2 608 aa12.56□□□□□ -0.4
TTC17-215ENST00000534417 KLHDC4Q8TBB5 520 aa12.56□□□□□ -0.4
TTC17-215ENST00000534417 ANP32BQ92688 251 aaKnown RBP12.56□□□□□ -0.4
TTC17-215ENST00000534417 TEX13AQ9BXU3 409 aaPredicted RBP12.56□□□□□ -0.4
TTC17-215ENST00000534417 RBSNQ9H1K0 784 aa12.56□□□□□ -0.4
TTC17-215ENST00000534417 MTMR6Q9Y217 621 aa12.56□□□□□ -0.4
TTC17-215ENST00000534417 LRP5O75197 1615 aa12.55□□□□□ -0.4
TTC17-215ENST00000534417 AHDC1Q5TGY3 1603 aaPredicted RBP12.55□□□□□ -0.4
TTC17-215ENST00000534417 DDX60Q8IY21 1712 aaKnown RBP12.55□□□□□ -0.4
TTC17-215ENST00000534417 LETM1O95202 739 aaPredicted RBP12.55□□□□□ -0.4
TTC17-215ENST00000534417 PDCP20941 246 aa12.55□□□□□ -0.4
TTC17-215ENST00000534417 PRIM1P49642 420 aaKnown RBP12.55□□□□□ -0.4
TTC17-215ENST00000534417 HSPA2P54652 639 aa12.55□□□□□ -0.4
TTC17-215ENST00000534417 ME3Q16798 604 aa12.55□□□□□ -0.4
TTC17-215ENST00000534417 BLOC1S2Q6QNY1 142 aa12.55□□□□□ -0.4
TTC17-215ENST00000534417 TTLL7Q6ZT98 887 aa12.55□□□□□ -0.4
TTC17-215ENST00000534417 USP48Q86UV5 1035 aa12.55□□□□□ -0.4
TTC17-215ENST00000534417 HELLSQ9NRZ9 838 aa12.55□□□□□ -0.4
TTC17-215ENST00000534417 RBM27Q9P2N5 1060 aaKnown RBP12.55□□□□□ -0.4
TTC17-215ENST00000534417 NSFL1CQ9UNZ2 370 aaKnown RBP12.55□□□□□ -0.4
TTC17-215ENST00000534417 RREB1Q92766 1687 aa12.54□□□□□ -0.4
TTC17-215ENST00000534417 ATP5J2-PTCD1G3V325 749 aa12.54□□□□□ -0.4
TTC17-215ENST00000534417 EYA2O00167 538 aa12.54□□□□□ -0.4
TTC17-215ENST00000534417 PTCD1O75127 700 aaKnown RBP12.54□□□□□ -0.4
TTC17-215ENST00000534417 NCLP19338 710 aaKnown RBP12.54□□□□□ -0.4
TTC17-215ENST00000534417 GJB2P29033 226 aa12.54□□□□□ -0.4
TTC17-215ENST00000534417 KCNJ4P48050 445 aa12.54□□□□□ -0.4
TTC17-215ENST00000534417 UBE2HP62256 183 aa12.54□□□□□ -0.4
TTC17-215ENST00000534417 ZNF589Q86UQ0 364 aaPredicted RBP12.54□□□□□ -0.4
TTC17-215ENST00000534417 ARXQ96QS3 562 aa12.54□□□□□ -0.4
TTC17-215ENST00000534417 DBNDD2Q9BQY9 259 aa12.54□□□□□ -0.4
TTC17-215ENST00000534417 COL16A1Q07092 1604 aaPredicted RBP12.54□□□□□ -0.4
TTC17-215ENST00000534417 MYH3P11055 1940 aa12.54□□□□□ -0.4
TTC17-215ENST00000534417 ARAP2Q8WZ64 1704 aa12.54□□□□□ -0.4
TTC17-215ENST00000534417 CPA1P15085 419 aa12.53□□□□□ -0.4
TTC17-215ENST00000534417 KCNA4P22459 653 aa12.53□□□□□ -0.4
TTC17-215ENST00000534417 TOB2Q14106 344 aaPredicted RBP12.53□□□□□ -0.4
TTC17-215ENST00000534417 MCMDC2Q4G0Z9 681 aa12.53□□□□□ -0.4
TTC17-215ENST00000534417 CCDC83Q8IWF9 413 aa12.53□□□□□ -0.4
TTC17-215ENST00000534417 FAM184AQ8NB25 1140 aa12.53□□□□□ -0.4
TTC17-215ENST00000534417 TRIM44Q96DX7 344 aaPredicted RBP12.53□□□□□ -0.4
TTC17-215ENST00000534417 CHAMP1Q96JM3 812 aa12.53□□□□□ -0.4
TTC17-215ENST00000534417 DSCC1Q9BVC3 393 aa12.53□□□□□ -0.4
TTC17-215ENST00000534417 TPCN1Q9ULQ1 816 aa12.53□□□□□ -0.4
TTC17-215ENST00000534417 ELP1O95163 1332 aa12.53□□□□□ -0.4
TTC17-215ENST00000534417 CDHR2Q9BYE9 1310 aa12.53□□□□□ -0.4
TTC17-215ENST00000534417 MYH7P12883 1935 aa12.52□□□□□ -0.4
TTC17-215ENST00000534417 SYCE3A1L190 88 aa12.52□□□□□ -0.41
TTC17-215ENST00000534417 A1BGP04217 495 aa12.52□□□□□ -0.41
TTC17-215ENST00000534417 PCCAP05165 728 aaPredicted RBP12.52□□□□□ -0.41
TTC17-215ENST00000534417 PIP4K2AP48426 406 aaPredicted RBP12.52□□□□□ -0.41
TTC17-215ENST00000534417 TCIRG1Q13488 830 aa12.52□□□□□ -0.41
TTC17-215ENST00000534417 UVSSAQ2YD98 709 aa12.52□□□□□ -0.41
TTC17-215ENST00000534417 ZMYM1Q5SVZ6 1142 aa12.52□□□□□ -0.41
TTC17-215ENST00000534417 CCDC183Q5T5S1 534 aa12.52□□□□□ -0.41
TTC17-215ENST00000534417 TSPY26PQ9H489 355 aa12.52□□□□□ -0.41
TTC17-215ENST00000534417 MYH15Q9Y2K3 1946 aa12.52□□□□□ -0.41
TTC17-215ENST00000534417 GADD45BO75293 160 aaPredicted RBP12.51□□□□□ -0.41
TTC17-215ENST00000534417 CSF1RP07333 972 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms