RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 LIMCH1Q9UPQ0 1083 aa16.39■□□□□ 0.22
FOXRED1-218ENST00000534315 ADAMTS2O95450 1211 aa16.39■□□□□ 0.21
FOXRED1-218ENST00000534315 CYP19A1P11511 503 aaPredicted RBP16.39■□□□□ 0.21
FOXRED1-218ENST00000534315 ZKSCAN1P17029 563 aaPredicted RBP16.39■□□□□ 0.21
FOXRED1-218ENST00000534315 FAM89AQ96GI7 184 aa16.39■□□□□ 0.21
FOXRED1-218ENST00000534315 CHAMP1Q96JM3 812 aa16.39■□□□□ 0.21
FOXRED1-218ENST00000534315 ZSWIM6Q9HCJ5 1215 aa16.39■□□□□ 0.21
FOXRED1-218ENST00000534315 RFX7Q2KHR2 1363 aa16.39■□□□□ 0.21
FOXRED1-218ENST00000534315 JCADQ9P266 1359 aa16.39■□□□□ 0.21
FOXRED1-218ENST00000534315 DOT1LQ8TEK3 1739 aa16.39■□□□□ 0.21
FOXRED1-218ENST00000534315 ZNF609O15014 1411 aa16.39■□□□□ 0.21
FOXRED1-218ENST00000534315 SLC27A2O14975 620 aa16.38■□□□□ 0.21
FOXRED1-218ENST00000534315 PCCAP05165 728 aaPredicted RBP16.38■□□□□ 0.21
FOXRED1-218ENST00000534315 TIMM10P62072 90 aa16.38■□□□□ 0.21
FOXRED1-218ENST00000534315 KLHL40Q2TBA0 621 aa16.38■□□□□ 0.21
FOXRED1-218ENST00000534315 GIGYF2Q6Y7W6 1299 aaKnown RBP16.38■□□□□ 0.21
FOXRED1-218ENST00000534315 PUS3Q9BZE2 481 aaKnown RBP16.38■□□□□ 0.21
FOXRED1-218ENST00000534315 LMBRD1Q9NUN5 540 aa16.38■□□□□ 0.21
FOXRED1-218ENST00000534315 DDX49Q9Y6V7 483 aaKnown RBP16.38■□□□□ 0.21
FOXRED1-218ENST00000534315 CIAO1O76071 339 aa16.38■□□□□ 0.21
FOXRED1-218ENST00000534315 CHGBP05060 677 aa16.38■□□□□ 0.21
FOXRED1-218ENST00000534315 PRIM1P49642 420 aaKnown RBP16.38■□□□□ 0.21
FOXRED1-218ENST00000534315 HLFQ16534 295 aa16.38■□□□□ 0.21
FOXRED1-218ENST00000534315 DDX46Q7L014 1031 aaKnown RBP16.38■□□□□ 0.21
FOXRED1-218ENST00000534315 PDRG1Q9NUG6 133 aa16.38■□□□□ 0.21
FOXRED1-218ENST00000534315 ZBTB1Q9Y2K1 713 aa16.38■□□□□ 0.21
FOXRED1-218ENST00000534315 CYP46A1Q9Y6A2 500 aa16.38■□□□□ 0.21
FOXRED1-218ENST00000534315 PHLPP1O60346 1717 aa16.37■□□□□ 0.21
FOXRED1-218ENST00000534315 NRAPQ86VF7 1730 aa16.37■□□□□ 0.21
FOXRED1-218ENST00000534315 VPS53Q5VIR6 699 aa16.37■□□□□ 0.21
FOXRED1-218ENST00000534315 ZBTB38Q8NAP3 1195 aaPredicted RBP16.37■□□□□ 0.21
FOXRED1-218ENST00000534315 TAF5LO75529 589 aa16.37■□□□□ 0.21
FOXRED1-218ENST00000534315 LARGE1O95461 756 aa16.37■□□□□ 0.21
FOXRED1-218ENST00000534315 GPTP24298 496 aa16.37■□□□□ 0.21
FOXRED1-218ENST00000534315 CCDC57Q2TAC2 916 aa16.37■□□□□ 0.21
FOXRED1-218ENST00000534315 CCDC85AQ96PX6 553 aaPredicted RBP16.37■□□□□ 0.21
FOXRED1-218ENST00000534315 RPAP1Q9BWH6 1393 aaPredicted RBP16.37■□□□□ 0.21
FOXRED1-218ENST00000534315 PLA2G12BQ9BX93 195 aa16.37■□□□□ 0.21
FOXRED1-218ENST00000534315 SPATA31A1Q5TZJ5 1347 aa16.36■□□□□ 0.21
FOXRED1-218ENST00000534315 XRCC6P12956 609 aaKnown RBP eCLIP16.36■□□□□ 0.21
FOXRED1-218ENST00000534315 A0A1B0GUL7 405 aa16.35■□□□□ 0.21
FOXRED1-218ENST00000534315 SYNE4Q8N205 404 aa16.35■□□□□ 0.21
FOXRED1-218ENST00000534315 KBTBD3Q8NAB2 608 aa16.35■□□□□ 0.21
FOXRED1-218ENST00000534315 TAF6LQ9Y6J9 622 aa16.35■□□□□ 0.21
FOXRED1-218ENST00000534315 ANKRD36CQ5JPF3 1778 aa16.35■□□□□ 0.21
FOXRED1-218ENST00000534315 PRPF40AO75400 957 aaKnown RBP16.35■□□□□ 0.21
FOXRED1-218ENST00000534315 COL9A3Q14050 684 aaPredicted RBP16.35■□□□□ 0.21
FOXRED1-218ENST00000534315 RNF20Q5VTR2 975 aa16.35■□□□□ 0.21
FOXRED1-218ENST00000534315 CCDC129Q6ZRS4 1044 aa16.35■□□□□ 0.21
FOXRED1-218ENST00000534315 NLRP10Q86W26 655 aa16.35■□□□□ 0.21
FOXRED1-218ENST00000534315 SEC62Q99442 399 aaKnown RBP16.35■□□□□ 0.21
FOXRED1-218ENST00000534315 CSF1RP07333 972 aa16.34■□□□□ 0.21
FOXRED1-218ENST00000534315 CDCA7Q9BWT1 371 aaPredicted RBP16.34■□□□□ 0.21
FOXRED1-218ENST00000534315 PAG1Q9NWQ8 432 aa16.34■□□□□ 0.21
FOXRED1-218ENST00000534315 CEP126Q9P2H0 1117 aa16.34■□□□□ 0.21
FOXRED1-218ENST00000534315 PALLDQ8WX93 1383 aa16.34■□□□□ 0.21
FOXRED1-218ENST00000534315 GOLIM4O00461 696 aa16.34■□□□□ 0.21
FOXRED1-218ENST00000534315 DDB1Q16531 1140 aa16.34■□□□□ 0.21
FOXRED1-218ENST00000534315 HSP90AB3PQ58FF7 597 aa16.34■□□□□ 0.21
FOXRED1-218ENST00000534315 CDHR2Q9BYE9 1310 aa16.33■□□□□ 0.21
FOXRED1-218ENST00000534315 PSMA5P28066 241 aa16.33■□□□□ 0.2
FOXRED1-218ENST00000534315 USPL1Q5W0Q7 1092 aa16.33■□□□□ 0.2
FOXRED1-218ENST00000534315 GAS2L3Q86XJ1 694 aa16.33■□□□□ 0.2
FOXRED1-218ENST00000534315 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.33■□□□□ 0.2
FOXRED1-218ENST00000534315 NUP98P52948 1817 aa16.33■□□□□ 0.2
FOXRED1-218ENST00000534315 WDR33Q9C0J8 1336 aaKnown RBP16.33■□□□□ 0.2
FOXRED1-218ENST00000534315 A0A0G2JS52 829 aa16.33■□□□□ 0.2
FOXRED1-218ENST00000534315 MCMDC2Q4G0Z9 681 aa16.33■□□□□ 0.2
FOXRED1-218ENST00000534315 TAF7LQ5H9L4 462 aa16.33■□□□□ 0.2
FOXRED1-218ENST00000534315 CCDC83Q8IWF9 413 aa16.33■□□□□ 0.2
FOXRED1-218ENST00000534315 HMG20BQ9P0W2 317 aa16.33■□□□□ 0.2
FOXRED1-218ENST00000534315 FBXO3Q9UK99 471 aa16.33■□□□□ 0.2
FOXRED1-218ENST00000534315 ISY1Q9ULR0 285 aaKnown RBP16.33■□□□□ 0.2
FOXRED1-218ENST00000534315 THRAP3Q9Y2W1 955 aaKnown RBP16.33■□□□□ 0.2
FOXRED1-218ENST00000534315 NUTM2BA6NNL0 878 aaPredicted RBP16.32■□□□□ 0.2
FOXRED1-218ENST00000534315 NUTM2EB1AL46 878 aaPredicted RBP16.32■□□□□ 0.2
FOXRED1-218ENST00000534315 IFIT1P09914 478 aaKnown RBP16.32■□□□□ 0.2
FOXRED1-218ENST00000534315 MRE11P49959 708 aa16.32■□□□□ 0.2
FOXRED1-218ENST00000534315 IFIT5Q13325 482 aaKnown RBP16.32■□□□□ 0.2
FOXRED1-218ENST00000534315 BLOC1S2Q6QNY1 142 aa16.32■□□□□ 0.2
FOXRED1-218ENST00000534315 NUTM2AQ8IVF1 878 aaPredicted RBP16.32■□□□□ 0.2
FOXRED1-218ENST00000534315 ZSCAN31Q96LW9 406 aaPredicted RBP16.32■□□□□ 0.2
FOXRED1-218ENST00000534315 SH3TC1Q8TE82 1336 aa16.32■□□□□ 0.2
FOXRED1-218ENST00000534315 NCLP19338 710 aaKnown RBP16.31■□□□□ 0.2
FOXRED1-218ENST00000534315 IL6STP40189 918 aaPredicted RBP16.31■□□□□ 0.2
FOXRED1-218ENST00000534315 TSGA10IPQ3SY00 556 aa16.31■□□□□ 0.2
FOXRED1-218ENST00000534315 DZIP3Q86Y13 1208 aaKnown RBP16.31■□□□□ 0.2
FOXRED1-218ENST00000534315 ACSBG1Q96GR2 724 aa16.31■□□□□ 0.2
FOXRED1-218ENST00000534315 PANK2Q9BZ23 570 aa16.31■□□□□ 0.2
FOXRED1-218ENST00000534315 GRPEL1Q9HAV7 217 aa16.31■□□□□ 0.2
FOXRED1-218ENST00000534315 SH2B1Q9NRF2 756 aaPredicted RBP16.31■□□□□ 0.2
FOXRED1-218ENST00000534315 TBC1D2BQ9UPU7 963 aa16.31■□□□□ 0.2
FOXRED1-218ENST00000534315 SMC3Q9UQE7 1217 aa16.31■□□□□ 0.2
FOXRED1-218ENST00000534315 MYH3P11055 1940 aa16.31■□□□□ 0.2
FOXRED1-218ENST00000534315 ST3GAL1Q11201 340 aa16.31■□□□□ 0.2
FOXRED1-218ENST00000534315 ME3Q16798 604 aa16.31■□□□□ 0.2
FOXRED1-218ENST00000534315 SLFNL1Q499Z3 407 aa16.31■□□□□ 0.2
FOXRED1-218ENST00000534315 GPT2Q8TD30 523 aa16.31■□□□□ 0.2
FOXRED1-218ENST00000534315 TCEANC2Q96MN5 208 aa16.31■□□□□ 0.2
FOXRED1-218ENST00000534315 ADORA1P30542 326 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms