RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 DRC7Q8IY82 874 aa22.92■■□□□ 1.26
CAPN1-226ENST00000533820 SPATA32Q96LK8 384 aa22.92■■□□□ 1.26
CAPN1-226ENST00000533820 ZC3H6P61129 1189 aaKnown RBP22.92■■□□□ 1.26
CAPN1-226ENST00000533820 MAP3K11Q16584 847 aa22.92■■□□□ 1.26
CAPN1-226ENST00000533820 MYRIPQ8NFW9 859 aa22.92■■□□□ 1.26
CAPN1-226ENST00000533820 HSP90B1P14625 803 aaKnown RBP22.91■■□□□ 1.26
CAPN1-226ENST00000533820 TNMDQ9H2S6 317 aa22.91■■□□□ 1.26
CAPN1-226ENST00000533820 DDX58O95786 925 aaKnown RBP22.91■■□□□ 1.26
CAPN1-226ENST00000533820 PTGS1P23219 599 aa22.91■■□□□ 1.26
CAPN1-226ENST00000533820 TOB2Q14106 344 aaPredicted RBP22.91■■□□□ 1.26
CAPN1-226ENST00000533820 RNF20Q5VTR2 975 aa22.91■■□□□ 1.26
CAPN1-226ENST00000533820 RGPD2P0DJD1 1756 aa22.91■■□□□ 1.26
CAPN1-226ENST00000533820 TYRO3Q06418 890 aa22.9■■□□□ 1.26
CAPN1-226ENST00000533820 SLFNL1Q499Z3 407 aa22.9■■□□□ 1.26
CAPN1-226ENST00000533820 BICD2Q8TD16 824 aa22.9■■□□□ 1.26
CAPN1-226ENST00000533820 XAGE3Q8WTP9 111 aa22.9■■□□□ 1.26
CAPN1-226ENST00000533820 ANKARQ7Z5J8 1434 aa22.9■■□□□ 1.26
CAPN1-226ENST00000533820 RPS6KB1P23443 525 aa22.9■■□□□ 1.26
CAPN1-226ENST00000533820 COPS6Q7L5N1 327 aa22.9■■□□□ 1.26
CAPN1-226ENST00000533820 LTN1O94822 1766 aa22.9■■□□□ 1.26
CAPN1-226ENST00000533820 ANO6Q4KMQ2 910 aa22.9■■□□□ 1.26
CAPN1-226ENST00000533820 MARF1Q9Y4F3 1742 aaKnown RBP22.89■■□□□ 1.26
CAPN1-226ENST00000533820 AMOTQ4VCS5 1084 aa22.89■■□□□ 1.26
CAPN1-226ENST00000533820 KCNH5Q8NCM2 988 aa22.89■■□□□ 1.26
CAPN1-226ENST00000533820 GTPBP4Q9BZE4 634 aaKnown RBP22.89■■□□□ 1.26
CAPN1-226ENST00000533820 ATP5J2-PTCD1G3V325 749 aa22.89■■□□□ 1.25
CAPN1-226ENST00000533820 PTCD1O75127 700 aaKnown RBP22.89■■□□□ 1.25
CAPN1-226ENST00000533820 MRVI1Q9Y6F6 885 aa22.89■■□□□ 1.25
CAPN1-226ENST00000533820 KCNB2Q92953 911 aa22.88■■□□□ 1.25
CAPN1-226ENST00000533820 DDX21Q9NR30 783 aaKnown RBP eCLIP22.88■■□□□ 1.25
CAPN1-226ENST00000533820 NRBP1Q9UHY1 535 aa22.88■■□□□ 1.25
CAPN1-226ENST00000533820 SPDYE4A6NLX3 237 aa22.88■■□□□ 1.25
CAPN1-226ENST00000533820 NEXNQ0ZGT2 675 aa22.88■■□□□ 1.25
CAPN1-226ENST00000533820 LRMPQ12912 555 aa22.88■■□□□ 1.25
CAPN1-226ENST00000533820 DDX46Q7L014 1031 aaKnown RBP22.87■■□□□ 1.25
CAPN1-226ENST00000533820 NFATC2IPQ8NCF5 419 aa22.87■■□□□ 1.25
CAPN1-226ENST00000533820 HIP1O00291 1037 aa22.87■■□□□ 1.25
CAPN1-226ENST00000533820 NR1I2O75469 434 aa22.87■■□□□ 1.25
CAPN1-226ENST00000533820 TFCP2Q12800 502 aa22.87■■□□□ 1.25
CAPN1-226ENST00000533820 PDIA6Q15084 440 aa22.87■■□□□ 1.25
CAPN1-226ENST00000533820 PDCP20941 246 aa22.86■■□□□ 1.25
CAPN1-226ENST00000533820 UBE3BQ7Z3V4 1068 aa22.86■■□□□ 1.25
CAPN1-226ENST00000533820 FAM200AQ8TCP9 573 aa22.86■■□□□ 1.25
CAPN1-226ENST00000533820 HDAC5Q9UQL6 1122 aa22.86■■□□□ 1.25
CAPN1-226ENST00000533820 ARHGAP23Q9P227 1491 aa22.86■■□□□ 1.25
CAPN1-226ENST00000533820 A0A087WWV3 80 aa22.86■■□□□ 1.25
CAPN1-226ENST00000533820 CERS3Q8IU89 383 aa22.86■■□□□ 1.25
CAPN1-226ENST00000533820 LEO1Q8WVC0 666 aaPredicted RBP22.86■■□□□ 1.25
CAPN1-226ENST00000533820 DBNLQ9UJU6 430 aaKnown RBP22.86■■□□□ 1.25
CAPN1-226ENST00000533820 KIF13AQ9H1H9 1805 aa22.86■■□□□ 1.25
CAPN1-226ENST00000533820 TAF5LO75529 589 aa22.85■■□□□ 1.25
CAPN1-226ENST00000533820 ZNF710Q8N1W2 664 aa22.85■■□□□ 1.25
CAPN1-226ENST00000533820 KIAA1524Q8TCG1 905 aa22.85■■□□□ 1.25
CAPN1-226ENST00000533820 BRF1Q92994 677 aa22.85■■□□□ 1.25
CAPN1-226ENST00000533820 TRIM5Q9C035 493 aa22.85■■□□□ 1.25
CAPN1-226ENST00000533820 CBX8Q9HC52 389 aa22.85■■□□□ 1.25
CAPN1-226ENST00000533820 NLRP2Q9NX02 1062 aa22.85■■□□□ 1.25
CAPN1-226ENST00000533820 N4BP2Q86UW6 1770 aaPredicted RBP22.85■■□□□ 1.25
CAPN1-226ENST00000533820 NEURL1BA8MQ27 555 aa22.85■■□□□ 1.25
CAPN1-226ENST00000533820 H3BQV1 296 aa22.85■■□□□ 1.25
CAPN1-226ENST00000533820 ATP2B3Q16720 1220 aa22.85■■□□□ 1.25
CAPN1-226ENST00000533820 IFFO2Q5TF58 517 aa22.85■■□□□ 1.25
CAPN1-226ENST00000533820 CCDC186Q7Z3E2 898 aa22.85■■□□□ 1.25
CAPN1-226ENST00000533820 FBXW7Q969H0 707 aa22.85■■□□□ 1.25
CAPN1-226ENST00000533820 ARHGEF25Q86VW2 580 aa22.85■■□□□ 1.25
CAPN1-226ENST00000533820 FTOQ9C0B1 505 aaKnown RBP eCLIP22.85■■□□□ 1.25
CAPN1-226ENST00000533820 DNAJC25Q9H1X3 360 aa22.85■■□□□ 1.25
CAPN1-226ENST00000533820 SLIT1O75093 1534 aa22.85■■□□□ 1.25
CAPN1-226ENST00000533820 GCKRQ14397 625 aa22.84■■□□□ 1.25
CAPN1-226ENST00000533820 Q6ZUG5 572 aa22.84■■□□□ 1.25
CAPN1-226ENST00000533820 NPHP4O75161 1426 aaPredicted RBP22.84■■□□□ 1.25
CAPN1-226ENST00000533820 DBNDD2Q9BQY9 259 aa22.84■■□□□ 1.25
CAPN1-226ENST00000533820 ZNF790Q6PG37 636 aa22.83■■□□□ 1.25
CAPN1-226ENST00000533820 PGBD1Q96JS3 809 aa22.83■■□□□ 1.25
CAPN1-226ENST00000533820 KIF3AQ9Y496 699 aa22.83■■□□□ 1.25
CAPN1-226ENST00000533820 ANKRD1Q15327 319 aa22.83■■□□□ 1.25
CAPN1-226ENST00000533820 PRIMPOLQ96LW4 560 aa22.83■■□□□ 1.25
CAPN1-226ENST00000533820 USP16Q9Y5T5 823 aa22.83■■□□□ 1.25
CAPN1-226ENST00000533820 TAOK2Q9UL54 1235 aa22.83■■□□□ 1.24
CAPN1-226ENST00000533820 COL15A1P39059 1388 aa22.82■■□□□ 1.24
CAPN1-226ENST00000533820 HMGN5P82970 282 aaKnown RBP22.82■■□□□ 1.24
CAPN1-226ENST00000533820 ZNF496Q96IT1 587 aaPredicted RBP22.82■■□□□ 1.24
CAPN1-226ENST00000533820 NEK1Q96PY6 1258 aa22.82■■□□□ 1.24
CAPN1-226ENST00000533820 SCAND2PQ9GZW5 306 aaPredicted RBP22.82■■□□□ 1.24
CAPN1-226ENST00000533820 SPTLC3Q9NUV7 552 aa22.82■■□□□ 1.24
CAPN1-226ENST00000533820 GOLGA6L6A8MZA4 724 aa22.81■■□□□ 1.24
CAPN1-226ENST00000533820 GUCY1B3Q02153 619 aa22.81■■□□□ 1.24
CAPN1-226ENST00000533820 NEUROD6Q96NK8 337 aa22.81■■□□□ 1.24
CAPN1-226ENST00000533820 RIOK3O14730 519 aaKnown RBP22.81■■□□□ 1.24
CAPN1-226ENST00000533820 C16orf45Q96MC5 204 aaPredicted RBP22.81■■□□□ 1.24
CAPN1-226ENST00000533820 KDM3BQ7LBC6 1761 aa22.81■■□□□ 1.24
CAPN1-226ENST00000533820 CCT2P78371 535 aaKnown RBP22.8■■□□□ 1.24
CAPN1-226ENST00000533820 CHST3Q7LGC8 479 aa22.8■■□□□ 1.24
CAPN1-226ENST00000533820 MED1Q15648 1581 aaPredicted RBP22.8■■□□□ 1.24
CAPN1-226ENST00000533820 ERCC4Q92889 916 aaPredicted RBP22.8■■□□□ 1.24
CAPN1-226ENST00000533820 MED23Q9ULK4 1368 aa22.8■■□□□ 1.24
CAPN1-226ENST00000533820 A0A0G2JLW4 131 aa22.8■■□□□ 1.24
CAPN1-226ENST00000533820 CYP21A2P08686 494 aa22.8■■□□□ 1.24
CAPN1-226ENST00000533820 ZNF165P49910 485 aa22.8■■□□□ 1.24
CAPN1-226ENST00000533820 TNNI3KQ59H18 835 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms