RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 PAPPA2Q9BXP8 1791 aa14.43□□□□□ -0.1
CSDE1-215ENST00000533818 FKBP1BP68106 108 aa14.43□□□□□ -0.1
CSDE1-215ENST00000533818 KIAA2012Q0VF49 1180 aa14.43□□□□□ -0.1
CSDE1-215ENST00000533818 ARMC5Q96C12 935 aa14.43□□□□□ -0.1
CSDE1-215ENST00000533818 CFHR5Q9BXR6 569 aa14.43□□□□□ -0.1
CSDE1-215ENST00000533818 RTFDC1Q9BY42 306 aaPredicted RBP14.43□□□□□ -0.1
CSDE1-215ENST00000533818 NYXQ9GZU5 481 aa14.43□□□□□ -0.1
CSDE1-215ENST00000533818 ATP6V0A2Q9Y487 856 aa14.43□□□□□ -0.1
CSDE1-215ENST00000533818 ABCC12Q96J65 1359 aa14.43□□□□□ -0.1
CSDE1-215ENST00000533818 UBR2Q8IWV8 1755 aa14.42□□□□□ -0.1
CSDE1-215ENST00000533818 YDJCA8MPS7 323 aa14.42□□□□□ -0.1
CSDE1-215ENST00000533818 RGL2O15211 777 aa14.42□□□□□ -0.1
CSDE1-215ENST00000533818 PTPN22Q9Y2R2 807 aa14.42□□□□□ -0.1
CSDE1-215ENST00000533818 CENPFP49454 3210 aa14.41□□□□□ -0.1
CSDE1-215ENST00000533818 TEFQ10587 303 aa14.41□□□□□ -0.1
CSDE1-215ENST00000533818 SREBF2Q12772 1141 aa14.41□□□□□ -0.1
CSDE1-215ENST00000533818 HLFQ16534 295 aa14.41□□□□□ -0.1
CSDE1-215ENST00000533818 MTHFSDQ2M296 383 aaKnown RBP14.41□□□□□ -0.1
CSDE1-215ENST00000533818 DPP8Q6V1X1 898 aaPredicted RBP14.41□□□□□ -0.1
CSDE1-215ENST00000533818 GGA3Q9NZ52 723 aa14.41□□□□□ -0.1
CSDE1-215ENST00000533818 USP16Q9Y5T5 823 aa14.41□□□□□ -0.1
CSDE1-215ENST00000533818 UBE2Q2LH0YL09 131 aa14.4□□□□□ -0.1
CSDE1-215ENST00000533818 IL13P35225 146 aa14.4□□□□□ -0.1
CSDE1-215ENST00000533818 MKRN3Q13064 507 aaKnown RBP14.4□□□□□ -0.1
CSDE1-215ENST00000533818 MOB2Q70IA6 237 aa14.4□□□□□ -0.1
CSDE1-215ENST00000533818 PSMD14O00487 310 aa14.39□□□□□ -0.11
CSDE1-215ENST00000533818 MPNDQ8N594 471 aa14.39□□□□□ -0.11
CSDE1-215ENST00000533818 RIC1Q4ADV7 1423 aa14.39□□□□□ -0.11
CSDE1-215ENST00000533818 KIF4BQ2VIQ3 1234 aa14.38□□□□□ -0.11
CSDE1-215ENST00000533818 DPF3Q92784 378 aa14.38□□□□□ -0.11
CSDE1-215ENST00000533818 ASTN2O75129 1339 aaPredicted RBP14.38□□□□□ -0.11
CSDE1-215ENST00000533818 RBBP6Q7Z6E9 1792 aaKnown RBP14.37□□□□□ -0.11
CSDE1-215ENST00000533818 POLR2AP24928 1970 aaKnown RBP14.37□□□□□ -0.11
CSDE1-215ENST00000533818 ALDH1A1P00352 501 aa14.37□□□□□ -0.11
CSDE1-215ENST00000533818 HMOX1P09601 288 aa14.37□□□□□ -0.11
CSDE1-215ENST00000533818 RPS12P25398 132 aaKnown RBP14.37□□□□□ -0.11
CSDE1-215ENST00000533818 SLC4A8Q2Y0W8 1093 aa14.37□□□□□ -0.11
CSDE1-215ENST00000533818 BRCA2P51587 3418 aa14.37□□□□□ -0.11
CSDE1-215ENST00000533818 IL17REQ8NFR9 667 aa14.36□□□□□ -0.11
CSDE1-215ENST00000533818 ERO1AQ96HE7 468 aa14.36□□□□□ -0.11
CSDE1-215ENST00000533818 LRCH3Q96II8 777 aa14.36□□□□□ -0.11
CSDE1-215ENST00000533818 ZNF333Q96JL9 665 aa14.36□□□□□ -0.11
CSDE1-215ENST00000533818 PRO3102Q9H379 93 aa14.36□□□□□ -0.11
CSDE1-215ENST00000533818 NBPF26B4DH59 902 aa14.35□□□□□ -0.11
CSDE1-215ENST00000533818 SOX1O00570 391 aaPredicted RBP14.35□□□□□ -0.11
CSDE1-215ENST00000533818 KCNQ3O43525 872 aa14.35□□□□□ -0.11
CSDE1-215ENST00000533818 TTLL12Q14166 644 aaPredicted RBP14.35□□□□□ -0.11
CSDE1-215ENST00000533818 ANGEL2Q5VTE6 544 aaKnown RBP14.35□□□□□ -0.11
CSDE1-215ENST00000533818 NBPF10Q6P3W6 841 aaKnown RBP14.35□□□□□ -0.11
CSDE1-215ENST00000533818 C3orf67Q6ZVT6 689 aa14.35□□□□□ -0.11
CSDE1-215ENST00000533818 SP8Q8IXZ3 490 aa14.35□□□□□ -0.11
CSDE1-215ENST00000533818 EFCC1Q9HA90 598 aa14.35□□□□□ -0.11
CSDE1-215ENST00000533818 NBPF11Q86T75 865 aa14.34□□□□□ -0.11
CSDE1-215ENST00000533818 CD99L2Q8TCZ2 262 aa14.34□□□□□ -0.11
CSDE1-215ENST00000533818 BBOX1O75936 387 aa14.33□□□□□ -0.12
CSDE1-215ENST00000533818 ANKRD13DQ6ZTN6 518 aa14.33□□□□□ -0.12
CSDE1-215ENST00000533818 NLRP3Q96P20 1036 aa14.33□□□□□ -0.12
CSDE1-215ENST00000533818 PRDM6Q9NQX0 595 aa14.33□□□□□ -0.12
CSDE1-215ENST00000533818 WTIPA6NIX2 430 aaPredicted RBP14.32□□□□□ -0.12
CSDE1-215ENST00000533818 BTBD11A6QL63 1104 aa14.32□□□□□ -0.12
CSDE1-215ENST00000533818 MYCP01106 439 aaPredicted RBP14.32□□□□□ -0.12
CSDE1-215ENST00000533818 GPTP24298 496 aa14.32□□□□□ -0.12
CSDE1-215ENST00000533818 TCIRG1Q13488 830 aa14.32□□□□□ -0.12
CSDE1-215ENST00000533818 SCARF1Q14162 830 aa14.32□□□□□ -0.12
CSDE1-215ENST00000533818 SUSD4Q5VX71 490 aa14.32□□□□□ -0.12
CSDE1-215ENST00000533818 DBNDD1Q9H9R9 158 aa14.32□□□□□ -0.12
CSDE1-215ENST00000533818 STXBP5LQ9Y2K9 1186 aa14.32□□□□□ -0.12
CSDE1-215ENST00000533818 UNC80Q8N2C7 3258 aa14.32□□□□□ -0.12
CSDE1-215ENST00000533818 ABCC4O15439 1325 aa14.32□□□□□ -0.12
CSDE1-215ENST00000533818 A0A1W2PPC1 479 aa14.31□□□□□ -0.12
CSDE1-215ENST00000533818 SNRPA1P09661 255 aaKnown RBP14.31□□□□□ -0.12
CSDE1-215ENST00000533818 SLC9C1Q4G0N8 1177 aa14.31□□□□□ -0.12
CSDE1-215ENST00000533818 PRAMEF18Q5VWM3 479 aa14.31□□□□□ -0.12
CSDE1-215ENST00000533818 MORC1Q86VD1 984 aa14.31□□□□□ -0.12
CSDE1-215ENST00000533818 KCNQ5Q9NR82 932 aa14.31□□□□□ -0.12
CSDE1-215ENST00000533818 GNAT3A8MTJ3 354 aa14.3□□□□□ -0.12
CSDE1-215ENST00000533818 INHBEP58166 350 aa14.3□□□□□ -0.12
CSDE1-215ENST00000533818 WASHC4Q2M389 1173 aa14.3□□□□□ -0.12
CSDE1-215ENST00000533818 IFNL1Q8IU54 200 aa14.3□□□□□ -0.12
CSDE1-215ENST00000533818 DEFB123Q8N688 67 aa14.3□□□□□ -0.12
CSDE1-215ENST00000533818 ERVV-1B6SEH8 477 aa14.29□□□□□ -0.12
CSDE1-215ENST00000533818 SPRYD7Q5W111 196 aa14.29□□□□□ -0.12
CSDE1-215ENST00000533818 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.29□□□□□ -0.12
CSDE1-215ENST00000533818 NGEFQ8N5V2 710 aa14.29□□□□□ -0.12
CSDE1-215ENST00000533818 SCAF8Q9UPN6 1271 aaKnown RBP14.29□□□□□ -0.12
CSDE1-215ENST00000533818 NR2E3Q9Y5X4 410 aa14.29□□□□□ -0.12
CSDE1-215ENST00000533818 UBN2Q6ZU65 1347 aa14.29□□□□□ -0.12
CSDE1-215ENST00000533818 IBTKQ9P2D0 1353 aaPredicted RBP14.29□□□□□ -0.12
CSDE1-215ENST00000533818 MANSC4A6NHS7 340 aaPredicted RBP14.28□□□□□ -0.12
CSDE1-215ENST00000533818 ZNF609O15014 1411 aa14.28□□□□□ -0.12
CSDE1-215ENST00000533818 RIMBP2O15034 1052 aa14.28□□□□□ -0.12
CSDE1-215ENST00000533818 PTPN12Q05209 780 aaKnown RBP14.28□□□□□ -0.12
CSDE1-215ENST00000533818 RTL9Q8NET4 1388 aa14.27□□□□□ -0.12
CSDE1-215ENST00000533818 NTSR2O95665 410 aa14.27□□□□□ -0.13
CSDE1-215ENST00000533818 NF2P35240 595 aa14.27□□□□□ -0.13
CSDE1-215ENST00000533818 ZNF280AP59817 542 aaPredicted RBP14.27□□□□□ -0.13
CSDE1-215ENST00000533818 SP3Q02447 781 aa14.27□□□□□ -0.13
CSDE1-215ENST00000533818 DOK7Q18PE1 504 aa14.27□□□□□ -0.13
CSDE1-215ENST00000533818 MAP3K15Q6ZN16 1313 aa14.26□□□□□ -0.13
CSDE1-215ENST00000533818 ECE2O60344 883 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms