RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 LRP6O75581 1613 aa14.29□□□□□ -0.12
ATM-222ENST00000533733 CIAO1O76071 339 aa14.29□□□□□ -0.12
ATM-222ENST00000533733 SYT1P21579 422 aa14.29□□□□□ -0.12
ATM-222ENST00000533733 VSIG10Q8N0Z9 540 aa14.29□□□□□ -0.12
ATM-222ENST00000533733 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.29□□□□□ -0.12
ATM-222ENST00000533733 CHMP4CQ96CF2 233 aa14.29□□□□□ -0.12
ATM-222ENST00000533733 RRAGDQ9NQL2 400 aaPredicted RBP14.29□□□□□ -0.12
ATM-222ENST00000533733 TMEM63CQ9P1W3 806 aa14.29□□□□□ -0.12
ATM-222ENST00000533733 DBNLQ9UJU6 430 aaKnown RBP14.29□□□□□ -0.12
ATM-222ENST00000533733 SH3TC1Q8TE82 1336 aa14.28□□□□□ -0.12
ATM-222ENST00000533733 TOGARAM1Q9Y4F4 1720 aa14.28□□□□□ -0.12
ATM-222ENST00000533733 UBE2HP62256 183 aa14.28□□□□□ -0.12
ATM-222ENST00000533733 TFCP2Q12800 502 aa14.28□□□□□ -0.12
ATM-222ENST00000533733 LRRFIP1Q32MZ4 808 aaKnown RBP14.28□□□□□ -0.12
ATM-222ENST00000533733 FAM227BQ96M60 508 aa14.28□□□□□ -0.12
ATM-222ENST00000533733 TLR7Q9NYK1 1049 aaKnown RBP14.28□□□□□ -0.12
ATM-222ENST00000533733 PLCH1Q4KWH8 1693 aa14.27□□□□□ -0.12
ATM-222ENST00000533733 A0A0D9SFI3 127 aa14.27□□□□□ -0.12
ATM-222ENST00000533733 RPS6KB1P23443 525 aa14.27□□□□□ -0.12
ATM-222ENST00000533733 PDLIM2Q96JY6 352 aa14.27□□□□□ -0.12
ATM-222ENST00000533733 SLAIN2Q9P270 581 aa14.27□□□□□ -0.12
ATM-222ENST00000533733 ANKRD36CQ5JPF3 1778 aa14.27□□□□□ -0.12
ATM-222ENST00000533733 TAF5LO75529 589 aa14.27□□□□□ -0.13
ATM-222ENST00000533733 HMGB1P09429 215 aaKnown RBP14.27□□□□□ -0.13
ATM-222ENST00000533733 GJB2P29033 226 aa14.27□□□□□ -0.13
ATM-222ENST00000533733 PRIM1P49642 420 aaKnown RBP14.27□□□□□ -0.13
ATM-222ENST00000533733 FOXO4P98177 505 aa14.27□□□□□ -0.13
ATM-222ENST00000533733 TRIM28Q13263 835 aaKnown RBP14.27□□□□□ -0.13
ATM-222ENST00000533733 ADCK5Q3MIX3 580 aa14.27□□□□□ -0.13
ATM-222ENST00000533733 LMBR1LQ6UX01 489 aa14.27□□□□□ -0.13
ATM-222ENST00000533733 KBTBD3Q8NAB2 608 aa14.27□□□□□ -0.13
ATM-222ENST00000533733 HELLSQ9NRZ9 838 aa14.27□□□□□ -0.13
ATM-222ENST00000533733 ABCC12Q96J65 1359 aa14.26□□□□□ -0.13
ATM-222ENST00000533733 ITGB4P16144 1822 aa14.26□□□□□ -0.13
ATM-222ENST00000533733 COL14A1Q05707 1796 aaKnown RBP14.26□□□□□ -0.13
ATM-222ENST00000533733 NBPF26B4DH59 902 aa14.26□□□□□ -0.13
ATM-222ENST00000533733 UVSSAQ2YD98 709 aa14.26□□□□□ -0.13
ATM-222ENST00000533733 MCMDC2Q4G0Z9 681 aa14.26□□□□□ -0.13
ATM-222ENST00000533733 CCDC183Q5T5S1 534 aa14.26□□□□□ -0.13
ATM-222ENST00000533733 NBPF14Q5TI25 921 aa14.26□□□□□ -0.13
ATM-222ENST00000533733 NBPF10Q6P3W6 841 aaKnown RBP14.26□□□□□ -0.13
ATM-222ENST00000533733 USP48Q86UV5 1035 aa14.26□□□□□ -0.13
ATM-222ENST00000533733 NBPF15Q8N660 670 aa14.26□□□□□ -0.13
ATM-222ENST00000533733 TSPY26PQ9H489 355 aa14.26□□□□□ -0.13
ATM-222ENST00000533733 LAMA4Q16363 1823 aa14.26□□□□□ -0.13
ATM-222ENST00000533733 MYH3P11055 1940 aa14.26□□□□□ -0.13
ATM-222ENST00000533733 ZNF609O15014 1411 aa14.25□□□□□ -0.13
ATM-222ENST00000533733 ATP5J2-PTCD1G3V325 749 aa14.25□□□□□ -0.13
ATM-222ENST00000533733 PTCD1O75127 700 aaKnown RBP14.25□□□□□ -0.13
ATM-222ENST00000533733 FOXD4L5Q5VV16 416 aaPredicted RBP14.25□□□□□ -0.13
ATM-222ENST00000533733 CCDC83Q8IWF9 413 aa14.25□□□□□ -0.13
ATM-222ENST00000533733 KLHDC4Q8TBB5 520 aa14.25□□□□□ -0.13
ATM-222ENST00000533733 FOXD4L4Q8WXT5 416 aaPredicted RBP14.25□□□□□ -0.13
ATM-222ENST00000533733 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.25□□□□□ -0.13
ATM-222ENST00000533733 MYH7P12883 1935 aa14.25□□□□□ -0.13
ATM-222ENST00000533733 SYCE3A1L190 88 aa14.24□□□□□ -0.13
ATM-222ENST00000533733 EYA2O00167 538 aa14.24□□□□□ -0.13
ATM-222ENST00000533733 ME3Q16798 604 aa14.24□□□□□ -0.13
ATM-222ENST00000533733 ILDR1Q86SU0 546 aaPredicted RBP14.24□□□□□ -0.13
ATM-222ENST00000533733 ZSCAN30Q86W11 494 aa14.24□□□□□ -0.13
ATM-222ENST00000533733 RBSNQ9H1K0 784 aa14.24□□□□□ -0.13
ATM-222ENST00000533733 RBM27Q9P2N5 1060 aaKnown RBP14.24□□□□□ -0.13
ATM-222ENST00000533733 MTMR6Q9Y217 621 aa14.24□□□□□ -0.13
ATM-222ENST00000533733 WNK3Q9BYP7 1800 aa14.24□□□□□ -0.13
ATM-222ENST00000533733 MCM5P33992 734 aa14.24□□□□□ -0.13
ATM-222ENST00000533733 ISCA1Q9BUE6 129 aa14.24□□□□□ -0.13
ATM-222ENST00000533733 DSCC1Q9BVC3 393 aa14.24□□□□□ -0.13
ATM-222ENST00000533733 PLA2G12BQ9BX93 195 aa14.24□□□□□ -0.13
ATM-222ENST00000533733 AKAP2Q9Y2D5 859 aa14.24□□□□□ -0.13
ATM-222ENST00000533733 ELP1O95163 1332 aa14.23□□□□□ -0.13
ATM-222ENST00000533733 EVA1CP58658 441 aa14.23□□□□□ -0.13
ATM-222ENST00000533733 ATG9AQ7Z3C6 839 aa14.23□□□□□ -0.13
ATM-222ENST00000533733 NEK1Q96PY6 1258 aa14.23□□□□□ -0.13
ATM-222ENST00000533733 DBNDD2Q9BQY9 259 aa14.23□□□□□ -0.13
ATM-222ENST00000533733 TMOD3Q9NYL9 352 aa14.23□□□□□ -0.13
ATM-222ENST00000533733 MYH15Q9Y2K3 1946 aa14.22□□□□□ -0.13
ATM-222ENST00000533733 LARGE1O95461 756 aa14.22□□□□□ -0.13
ATM-222ENST00000533733 KRT85P78386 507 aa14.22□□□□□ -0.13
ATM-222ENST00000533733 TCIRG1Q13488 830 aa14.22□□□□□ -0.13
ATM-222ENST00000533733 HSP90AB3PQ58FF7 597 aa14.22□□□□□ -0.13
ATM-222ENST00000533733 LARP1BQ659C4 914 aaKnown RBP14.22□□□□□ -0.13
ATM-222ENST00000533733 TPCN1Q9ULQ1 816 aa14.22□□□□□ -0.13
ATM-222ENST00000533733 KIF3AQ9Y496 699 aa14.22□□□□□ -0.13
ATM-222ENST00000533733 MSNP26038 577 aaKnown RBP14.21□□□□□ -0.13
ATM-222ENST00000533733 KIF6Q6ZMV9 814 aa14.21□□□□□ -0.13
ATM-222ENST00000533733 TTLL7Q6ZT98 887 aa14.21□□□□□ -0.13
ATM-222ENST00000533733 ZNF589Q86UQ0 364 aaPredicted RBP14.21□□□□□ -0.13
ATM-222ENST00000533733 LLPHQ9BRT6 129 aaKnown RBP14.21□□□□□ -0.13
ATM-222ENST00000533733 PAG1Q9NWQ8 432 aa14.21□□□□□ -0.13
ATM-222ENST00000533733 NSFL1CQ9UNZ2 370 aaKnown RBP14.21□□□□□ -0.13
ATM-222ENST00000533733 STARD3NLO95772 234 aa14.21□□□□□ -0.14
ATM-222ENST00000533733 PCCAP05165 728 aaPredicted RBP14.21□□□□□ -0.14
ATM-222ENST00000533733 ZFYP08048 801 aaPredicted RBP14.21□□□□□ -0.14
ATM-222ENST00000533733 CPA1P15085 419 aa14.21□□□□□ -0.14
ATM-222ENST00000533733 DNAJC2Q99543 621 aaKnown RBP14.21□□□□□ -0.14
ATM-222ENST00000533733 SCAND2PQ9GZW5 306 aaPredicted RBP14.21□□□□□ -0.14
ATM-222ENST00000533733 CNPY2Q9Y2B0 182 aa14.21□□□□□ -0.14
ATM-222ENST00000533733 CHMP3Q9Y3E7 222 aa14.21□□□□□ -0.14
ATM-222ENST00000533733 CDHR2Q9BYE9 1310 aa14.2□□□□□ -0.14
ATM-222ENST00000533733 COL22A1Q8NFW1 1626 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms