RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 TNRC6CQ9HCJ0 1690 aaKnown RBP14.9□□□□□ -0.02
COMMD9-208ENST00000533643 LAMB2P55268 1798 aa14.89□□□□□ -0.03
COMMD9-208ENST00000533643 FAM161AQ3B820 660 aa14.89□□□□□ -0.03
COMMD9-208ENST00000533643 SIRT2Q8IXJ6 389 aa14.89□□□□□ -0.03
COMMD9-208ENST00000533643 GREM2Q9H772 168 aa14.89□□□□□ -0.03
COMMD9-208ENST00000533643 ANKRD31Q8N7Z5 1873 aa14.89□□□□□ -0.03
COMMD9-208ENST00000533643 RTL9Q8NET4 1388 aa14.88□□□□□ -0.03
COMMD9-208ENST00000533643 PNMA6EA0A0J9YXQ4 647 aa14.88□□□□□ -0.03
COMMD9-208ENST00000533643 C2CD5Q86YS7 1000 aa14.88□□□□□ -0.03
COMMD9-208ENST00000533643 RPAP2Q8IXW5 612 aaPredicted RBP14.88□□□□□ -0.03
COMMD9-208ENST00000533643 SEC31BQ9NQW1 1179 aa14.88□□□□□ -0.03
COMMD9-208ENST00000533643 CHMP3Q9Y3E7 222 aa14.88□□□□□ -0.03
COMMD9-208ENST00000533643 CD2APQ9Y5K6 639 aa14.88□□□□□ -0.03
COMMD9-208ENST00000533643 SRGAP3O43295 1099 aa14.87□□□□□ -0.03
COMMD9-208ENST00000533643 SRGNP10124 158 aa14.87□□□□□ -0.03
COMMD9-208ENST00000533643 ITGA6P23229 1130 aa14.87□□□□□ -0.03
COMMD9-208ENST00000533643 CHRNA5P30532 468 aa14.87□□□□□ -0.03
COMMD9-208ENST00000533643 HOXA10P31260 410 aaPredicted RBP14.87□□□□□ -0.03
COMMD9-208ENST00000533643 POLA2Q14181 598 aa14.87□□□□□ -0.03
COMMD9-208ENST00000533643 SSH3Q8TE77 659 aa14.87□□□□□ -0.03
COMMD9-208ENST00000533643 RPGRQ92834 1020 aaKnown RBP14.87□□□□□ -0.03
COMMD9-208ENST00000533643 PPP1R1BQ9UD71 204 aaPredicted RBP14.87□□□□□ -0.03
COMMD9-208ENST00000533643 PDZRN3Q9UPQ7 1066 aa14.87□□□□□ -0.03
COMMD9-208ENST00000533643 H0YIN7 160 aa14.86□□□□□ -0.03
COMMD9-208ENST00000533643 NPR1P16066 1061 aa14.86□□□□□ -0.03
COMMD9-208ENST00000533643 RFX5P48382 616 aaPredicted RBP14.86□□□□□ -0.03
COMMD9-208ENST00000533643 TGFB2P61812 414 aa14.86□□□□□ -0.03
COMMD9-208ENST00000533643 IFIT5Q13325 482 aaKnown RBP14.86□□□□□ -0.03
COMMD9-208ENST00000533643 CCDC57Q2TAC2 916 aa14.86□□□□□ -0.03
COMMD9-208ENST00000533643 ERICH6BQ5W0A0 696 aa14.86□□□□□ -0.03
COMMD9-208ENST00000533643 DDX46Q7L014 1031 aaKnown RBP14.86□□□□□ -0.03
COMMD9-208ENST00000533643 RBM17Q96I25 401 aaKnown RBP14.86□□□□□ -0.03
COMMD9-208ENST00000533643 A0A0G2JLW4 131 aa14.85□□□□□ -0.03
COMMD9-208ENST00000533643 ANKRD18BA2A2Z9 1011 aa14.85□□□□□ -0.03
COMMD9-208ENST00000533643 DPEP1P16444 411 aa14.85□□□□□ -0.03
COMMD9-208ENST00000533643 KCNA3P22001 575 aa14.85□□□□□ -0.03
COMMD9-208ENST00000533643 KLHL34Q8N239 644 aa14.85□□□□□ -0.03
COMMD9-208ENST00000533643 MASTLQ96GX5 879 aa14.85□□□□□ -0.03
COMMD9-208ENST00000533643 ZNF594Q96JF6 807 aaPredicted RBP14.85□□□□□ -0.03
COMMD9-208ENST00000533643 CRAMP1Q96RY5 1269 aa14.85□□□□□ -0.03
COMMD9-208ENST00000533643 PTPN12Q05209 780 aaKnown RBP14.84□□□□□ -0.03
COMMD9-208ENST00000533643 STYK1Q6J9G0 422 aa14.84□□□□□ -0.03
COMMD9-208ENST00000533643 KLHDC4Q8TBB5 520 aa14.84□□□□□ -0.03
COMMD9-208ENST00000533643 CELF1Q92879 486 aaKnown RBP14.84□□□□□ -0.03
COMMD9-208ENST00000533643 PA2G4Q9UQ80 394 aaKnown RBP14.84□□□□□ -0.03
COMMD9-208ENST00000533643 KIF13BQ9NQT8 1826 aa14.84□□□□□ -0.03
COMMD9-208ENST00000533643 MYH3P11055 1940 aa14.84□□□□□ -0.03
COMMD9-208ENST00000533643 HMMRO75330 724 aa14.83□□□□□ -0.04
COMMD9-208ENST00000533643 RPS8P62241 208 aaKnown RBP14.83□□□□□ -0.04
COMMD9-208ENST00000533643 GRAPQ13588 217 aa14.83□□□□□ -0.04
COMMD9-208ENST00000533643 NLGN2Q8NFZ4 835 aa14.83□□□□□ -0.04
COMMD9-208ENST00000533643 GRAPLQ8TC17 118 aaPredicted RBP14.83□□□□□ -0.04
COMMD9-208ENST00000533643 ZNF622Q969S3 477 aaKnown RBP eCLIP14.83□□□□□ -0.04
COMMD9-208ENST00000533643 CDC5LQ99459 802 aaKnown RBP14.83□□□□□ -0.04
COMMD9-208ENST00000533643 FHDC1Q9C0D6 1143 aaPredicted RBP14.83□□□□□ -0.04
COMMD9-208ENST00000533643 COPRSQ9NQ92 184 aa14.83□□□□□ -0.04
COMMD9-208ENST00000533643 COL4A1P02462 1669 aa14.83□□□□□ -0.04
COMMD9-208ENST00000533643 COL11A2P13942 1736 aaPredicted RBP14.83□□□□□ -0.04
COMMD9-208ENST00000533643 HDAC1Q13547 482 aaPredicted RBP14.82□□□□□ -0.04
COMMD9-208ENST00000533643 TAF7LQ5H9L4 462 aa14.82□□□□□ -0.04
COMMD9-208ENST00000533643 ANKRD18AQ8IVF6 992 aa14.82□□□□□ -0.04
COMMD9-208ENST00000533643 KIAA1551Q9HCM1 1747 aa14.81□□□□□ -0.04
COMMD9-208ENST00000533643 BBOX1O75936 387 aa14.81□□□□□ -0.04
COMMD9-208ENST00000533643 IGHDP01880 384 aa14.81□□□□□ -0.04
COMMD9-208ENST00000533643 ALDH1B1P30837 517 aa14.81□□□□□ -0.04
COMMD9-208ENST00000533643 CNKSR1Q969H4 720 aa14.81□□□□□ -0.04
COMMD9-208ENST00000533643 PUS3Q9BZE2 481 aaKnown RBP14.81□□□□□ -0.04
COMMD9-208ENST00000533643 SIL1Q9H173 461 aa14.81□□□□□ -0.04
COMMD9-208ENST00000533643 RWDD1Q9H446 243 aaPredicted RBP14.81□□□□□ -0.04
COMMD9-208ENST00000533643 NOP58Q9Y2X3 529 aaKnown RBP14.81□□□□□ -0.04
COMMD9-208ENST00000533643 SURF6O75683 361 aaKnown RBP14.8□□□□□ -0.04
COMMD9-208ENST00000533643 IGHMBP2P38935 993 aaKnown RBP14.8□□□□□ -0.04
COMMD9-208ENST00000533643 LRRC24Q50LG9 513 aa14.8□□□□□ -0.04
COMMD9-208ENST00000533643 LDHAL6AQ6ZMR3 332 aa14.8□□□□□ -0.04
COMMD9-208ENST00000533643 ATG9AQ7Z3C6 839 aa14.8□□□□□ -0.04
COMMD9-208ENST00000533643 SYT17Q9BSW7 474 aa14.8□□□□□ -0.04
COMMD9-208ENST00000533643 BSDC1Q9NW68 430 aaPredicted RBP14.8□□□□□ -0.04
COMMD9-208ENST00000533643 PPP4R2Q9NY27 417 aa14.8□□□□□ -0.04
COMMD9-208ENST00000533643 RIPOR2Q9Y4F9 1068 aa14.8□□□□□ -0.04
COMMD9-208ENST00000533643 EYA2O00167 538 aa14.79□□□□□ -0.04
COMMD9-208ENST00000533643 LRP5O75197 1615 aa14.79□□□□□ -0.04
COMMD9-208ENST00000533643 TAF1P21675 1872 aa14.79□□□□□ -0.04
COMMD9-208ENST00000533643 PRPF40BQ6NWY9 871 aaKnown RBP14.79□□□□□ -0.04
COMMD9-208ENST00000533643 SRCAPQ6ZRS2 3230 aa14.79□□□□□ -0.04
COMMD9-208ENST00000533643 SLC51AQ86UW1 340 aa14.79□□□□□ -0.04
COMMD9-208ENST00000533643 TTLL6Q8N841 843 aa14.79□□□□□ -0.04
COMMD9-208ENST00000533643 MPHOSPH8Q99549 860 aa14.79□□□□□ -0.04
COMMD9-208ENST00000533643 DCTPP1Q9H773 170 aa14.79□□□□□ -0.04
COMMD9-208ENST00000533643 CNNM1Q9NRU3 951 aa14.79□□□□□ -0.04
COMMD9-208ENST00000533643 PIM2Q9P1W9 311 aa14.79□□□□□ -0.04
COMMD9-208ENST00000533643 PPEF1O14829 653 aaPredicted RBP14.78□□□□□ -0.04
COMMD9-208ENST00000533643 CIAO1O76071 339 aa14.78□□□□□ -0.04
COMMD9-208ENST00000533643 G3BP1Q13283 466 aaKnown RBP eCLIP14.78□□□□□ -0.04
COMMD9-208ENST00000533643 TMC4Q7Z404 712 aa14.78□□□□□ -0.04
COMMD9-208ENST00000533643 FBXO3Q9UK99 471 aa14.78□□□□□ -0.04
COMMD9-208ENST00000533643 EXOC6BQ9Y2D4 811 aa14.78□□□□□ -0.04
COMMD9-208ENST00000533643 IL15P40933 162 aaPredicted RBP14.77□□□□□ -0.05
COMMD9-208ENST00000533643 DALRD3Q5D0E6 543 aaKnown RBP14.77□□□□□ -0.05
COMMD9-208ENST00000533643 SP8Q8IXZ3 490 aa14.77□□□□□ -0.05
COMMD9-208ENST00000533643 C7orf43Q8WVR3 580 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms