RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 AMPD1P23109 780 aa5.1□□□□□ -1.59
ATM-220ENST00000533526 MPSTP25325 297 aa5.1□□□□□ -1.59
ATM-220ENST00000533526 TARSP26639 723 aaKnown RBP5.1□□□□□ -1.59
ATM-220ENST00000533526 GRNP28799 593 aaKnown RBP5.1□□□□□ -1.59
ATM-220ENST00000533526 SERPINB4P48594 390 aa5.1□□□□□ -1.59
ATM-220ENST00000533526 EHHADHQ08426 723 aa5.1□□□□□ -1.59
ATM-220ENST00000533526 KANK3Q6NY19 840 aa5.1□□□□□ -1.59
ATM-220ENST00000533526 C1orf229Q6ZS94 237 aaPredicted RBP5.1□□□□□ -1.59
ATM-220ENST00000533526 GLYCTKQ8IVS8 523 aa5.1□□□□□ -1.59
ATM-220ENST00000533526 UBE2OQ9C0C9 1292 aaKnown RBP5.1□□□□□ -1.59
ATM-220ENST00000533526 DNM1Q05193 864 aaKnown RBP5.09□□□□□ -1.59
ATM-220ENST00000533526 MTMR3Q13615 1198 aa5.09□□□□□ -1.59
ATM-220ENST00000533526 TTC39BQ5VTQ0 682 aaPredicted RBP5.09□□□□□ -1.59
ATM-220ENST00000533526 PDE12Q6L8Q7 609 aaKnown RBP5.09□□□□□ -1.59
ATM-220ENST00000533526 XKR5Q6UX68 686 aa5.09□□□□□ -1.59
ATM-220ENST00000533526 DHX32Q7L7V1 743 aaKnown RBP5.09□□□□□ -1.59
ATM-220ENST00000533526 KRT25Q7Z3Z0 450 aa5.09□□□□□ -1.59
ATM-220ENST00000533526 PODNQ7Z5L7 613 aa5.09□□□□□ -1.59
ATM-220ENST00000533526 RAB44Q7Z6P3 723 aaPredicted RBP5.09□□□□□ -1.59
ATM-220ENST00000533526 KCTD17Q8N5Z5 321 aa5.09□□□□□ -1.59
ATM-220ENST00000533526 NUDT16Q96DE0 195 aaKnown RBP5.09□□□□□ -1.59
ATM-220ENST00000533526 MDFIQ99750 246 aa5.09□□□□□ -1.59
ATM-220ENST00000533526 TLR7Q9NYK1 1049 aaKnown RBP5.09□□□□□ -1.59
ATM-220ENST00000533526 USP20Q9Y2K6 914 aa5.09□□□□□ -1.59
ATM-220ENST00000533526 PHF20L1A8MW92 1017 aa5.08□□□□□ -1.6
ATM-220ENST00000533526 SHISA8B8ZZ34 492 aa5.08□□□□□ -1.6
ATM-220ENST00000533526 H3BRB1 525 aa5.08□□□□□ -1.6
ATM-220ENST00000533526 RNF225M0QZC1 329 aaPredicted RBP5.08□□□□□ -1.6
ATM-220ENST00000533526 PDGFAP04085 211 aa5.08□□□□□ -1.6
ATM-220ENST00000533526 PSAPP07602 524 aa5.08□□□□□ -1.6
ATM-220ENST00000533526 SOX18P35713 384 aa5.08□□□□□ -1.6
ATM-220ENST00000533526 ADH7P40394 386 aa5.08□□□□□ -1.6
ATM-220ENST00000533526 NRLP54845 237 aa5.08□□□□□ -1.6
ATM-220ENST00000533526 ZNF211Q13398 564 aaPredicted RBP5.08□□□□□ -1.6
ATM-220ENST00000533526 CHSY3Q70JA7 882 aa5.08□□□□□ -1.6
ATM-220ENST00000533526 ATCAYQ86WG3 371 aa5.08□□□□□ -1.6
ATM-220ENST00000533526 TRPM4Q8TD43 1214 aa5.08□□□□□ -1.6
ATM-220ENST00000533526 EDEM1Q92611 657 aa5.08□□□□□ -1.6
ATM-220ENST00000533526 PMEPA1Q969W9 287 aa5.08□□□□□ -1.6
ATM-220ENST00000533526 CITED4Q96RK1 184 aa5.08□□□□□ -1.6
ATM-220ENST00000533526 IGFLR1Q9H665 355 aa5.08□□□□□ -1.6
ATM-220ENST00000533526 TUT1Q9H6E5 874 aaKnown RBP5.08□□□□□ -1.6
ATM-220ENST00000533526 RRAGCQ9HB90 399 aa5.08□□□□□ -1.6
ATM-220ENST00000533526 ANO2Q9NQ90 1003 aa5.08□□□□□ -1.6
ATM-220ENST00000533526 ZFATQ9P243 1243 aa5.08□□□□□ -1.6
ATM-220ENST00000533526 MKL2Q9ULH7 1088 aa5.08□□□□□ -1.6
ATM-220ENST00000533526 GPLD1P80108 840 aa5.07□□□□□ -1.6
ATM-220ENST00000533526 PLAURQ03405 335 aa5.07□□□□□ -1.6
ATM-220ENST00000533526 C8orf34Q49A92 452 aa5.07□□□□□ -1.6
ATM-220ENST00000533526 ELP3Q9H9T3 547 aa5.07□□□□□ -1.6
ATM-220ENST00000533526 DNAJB12Q9NXW2 375 aaKnown RBP5.07□□□□□ -1.6
ATM-220ENST00000533526 ABI2Q9NYB9 513 aaPredicted RBP5.07□□□□□ -1.6
ATM-220ENST00000533526 BRPF3Q9ULD4 1205 aa5.07□□□□□ -1.6
ATM-220ENST00000533526 SOWAHDA6NJG2 315 aa5.06□□□□□ -1.6
ATM-220ENST00000533526 NDUFB5O43674 189 aa5.06□□□□□ -1.6
ATM-220ENST00000533526 FZD6O60353 706 aa5.06□□□□□ -1.6
ATM-220ENST00000533526 MMP20O60882 483 aa5.06□□□□□ -1.6
ATM-220ENST00000533526 HOXD8P13378 290 aaPredicted RBP5.06□□□□□ -1.6
ATM-220ENST00000533526 TBC1D8BQ0IIM8 1120 aa5.06□□□□□ -1.6
ATM-220ENST00000533526 PDE3BQ13370 1112 aa5.06□□□□□ -1.6
ATM-220ENST00000533526 TRIP4Q15650 581 aaPredicted RBP5.06□□□□□ -1.6
ATM-220ENST00000533526 ZNF438Q7Z4V0 828 aa5.06□□□□□ -1.6
ATM-220ENST00000533526 RBSNQ9H1K0 784 aa5.06□□□□□ -1.6
ATM-220ENST00000533526 PRDM6Q9NQX0 595 aa5.06□□□□□ -1.6
ATM-220ENST00000533526 SLC6A14Q9UN76 642 aa5.06□□□□□ -1.6
ATM-220ENST00000533526 POLIQ9UNA4 740 aa5.06□□□□□ -1.6
ATM-220ENST00000533526 LOC102724428A0A0B4J2F2 783 aa5.05□□□□□ -1.6
ATM-220ENST00000533526 NEFLP07196 543 aa5.05□□□□□ -1.6
ATM-220ENST00000533526 SIK1P57059 783 aa5.05□□□□□ -1.6
ATM-220ENST00000533526 ECM1Q16610 540 aa5.05□□□□□ -1.6
ATM-220ENST00000533526 FAM35AQ86V20 835 aa5.05□□□□□ -1.6
ATM-220ENST00000533526 MICALL1Q8N3F8 863 aa5.05□□□□□ -1.6
ATM-220ENST00000533526 OR13H1Q8NG92 308 aa5.05□□□□□ -1.6
ATM-220ENST00000533526 TTC9Q92623 222 aa5.05□□□□□ -1.6
ATM-220ENST00000533526 SPACA7Q96KW9 195 aa5.05□□□□□ -1.6
ATM-220ENST00000533526 GGNBP2Q9H3C7 697 aa5.05□□□□□ -1.6
ATM-220ENST00000533526 CCDC87Q9NVE4 849 aa5.05□□□□□ -1.6
ATM-220ENST00000533526 FRRS1LQ9P0K9 344 aa5.05□□□□□ -1.6
ATM-220ENST00000533526 CNTNAP5Q8WYK1 1306 aa5.04□□□□□ -1.6
ATM-220ENST00000533526 SPDYE3A6NKU9 549 aa5.04□□□□□ -1.6
ATM-220ENST00000533526 ZBTB42B2RXF5 422 aa5.04□□□□□ -1.6
ATM-220ENST00000533526 M0R082 166 aa5.04□□□□□ -1.6
ATM-220ENST00000533526 GNB5O14775 395 aa5.04□□□□□ -1.6
ATM-220ENST00000533526 LILRB5O75023 590 aa5.04□□□□□ -1.6
ATM-220ENST00000533526 RGS9O75916 674 aaPredicted RBP5.04□□□□□ -1.6
ATM-220ENST00000533526 GHRHP01286 108 aa5.04□□□□□ -1.6
ATM-220ENST00000533526 DGKGP49619 791 aa5.04□□□□□ -1.6
ATM-220ENST00000533526 ARHGAP4P98171 946 aa5.04□□□□□ -1.6
ATM-220ENST00000533526 KCNMA1Q12791 1236 aa5.04□□□□□ -1.6
ATM-220ENST00000533526 HYAL2Q12891 473 aa5.04□□□□□ -1.6
ATM-220ENST00000533526 ELMSAN1Q6PJG2 1045 aa5.04□□□□□ -1.6
ATM-220ENST00000533526 LINC00114Q6XXX2 140 aa5.04□□□□□ -1.6
ATM-220ENST00000533526 C20orf204Q6ZNR8 217 aa5.04□□□□□ -1.6
ATM-220ENST00000533526 ALYREFQ86V81 257 aaKnown RBP5.04□□□□□ -1.6
ATM-220ENST00000533526 GJD3Q8N144 294 aa5.04□□□□□ -1.6
ATM-220ENST00000533526 ZNF417Q8TAU3 575 aa5.04□□□□□ -1.6
ATM-220ENST00000533526 ZNF587Q96SQ5 575 aaPredicted RBP5.04□□□□□ -1.6
ATM-220ENST00000533526 NOP53Q9NZM5 478 aaKnown RBP5.04□□□□□ -1.6
ATM-220ENST00000533526 BIN2Q9UBW5 565 aaPredicted RBP5.04□□□□□ -1.6
ATM-220ENST00000533526 IVNS1ABPQ9Y6Y0 642 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms