RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 CHMP3Q9Y3E7 222 aa23.12■■□□□ 1.29
UBXN1-215ENST00000533476 VSIG10Q8N0Z9 540 aa23.11■■□□□ 1.29
UBXN1-215ENST00000533476 EDC3Q96F86 508 aaKnown RBP23.11■■□□□ 1.29
UBXN1-215ENST00000533476 HMG20BQ9P0W2 317 aa23.11■■□□□ 1.29
UBXN1-215ENST00000533476 COL14A1Q05707 1796 aaKnown RBP23.1■■□□□ 1.29
UBXN1-215ENST00000533476 LARGE1O95461 756 aa23.1■■□□□ 1.29
UBXN1-215ENST00000533476 ZNF589Q86UQ0 364 aaPredicted RBP23.1■■□□□ 1.29
UBXN1-215ENST00000533476 ISCA1Q9BUE6 129 aa23.1■■□□□ 1.29
UBXN1-215ENST00000533476 ATG3Q9NT62 314 aa23.1■■□□□ 1.29
UBXN1-215ENST00000533476 IL15P40933 162 aaPredicted RBP23.1■■□□□ 1.29
UBXN1-215ENST00000533476 TEX13AQ9BXU3 409 aaPredicted RBP23.1■■□□□ 1.29
UBXN1-215ENST00000533476 SMC3Q9UQE7 1217 aa23.1■■□□□ 1.29
UBXN1-215ENST00000533476 DISP2A7MBM2 1401 aa23.09■■□□□ 1.29
UBXN1-215ENST00000533476 TAF5LO75529 589 aa23.09■■□□□ 1.29
UBXN1-215ENST00000533476 CLCN1P35523 988 aa23.09■■□□□ 1.29
UBXN1-215ENST00000533476 TSGA10IPQ3SY00 556 aa23.09■■□□□ 1.29
UBXN1-215ENST00000533476 LARP6Q9BRS8 491 aaKnown RBP23.09■■□□□ 1.29
UBXN1-215ENST00000533476 ZNF609O15014 1411 aa23.08■■□□□ 1.29
UBXN1-215ENST00000533476 USPL1Q5W0Q7 1092 aa23.08■■□□□ 1.29
UBXN1-215ENST00000533476 ANO8Q9HCE9 1232 aaPredicted RBP23.08■■□□□ 1.29
UBXN1-215ENST00000533476 PLCH1Q4KWH8 1693 aa23.08■■□□□ 1.29
UBXN1-215ENST00000533476 ITGB4P16144 1822 aa23.08■■□□□ 1.28
UBXN1-215ENST00000533476 CIAO1O76071 339 aa23.08■■□□□ 1.28
UBXN1-215ENST00000533476 ZSCAN22P10073 491 aaPredicted RBP23.08■■□□□ 1.28
UBXN1-215ENST00000533476 ALDH8A1Q9H2A2 487 aaPredicted RBP23.08■■□□□ 1.28
UBXN1-215ENST00000533476 LRP6O75581 1613 aa23.07■■□□□ 1.28
UBXN1-215ENST00000533476 TRIM28Q13263 835 aaKnown RBP23.07■■□□□ 1.28
UBXN1-215ENST00000533476 TCIRG1Q13488 830 aa23.07■■□□□ 1.28
UBXN1-215ENST00000533476 TICAM2Q86XR7 235 aa23.07■■□□□ 1.28
UBXN1-215ENST00000533476 PIGBQ92521 554 aa23.07■■□□□ 1.28
UBXN1-215ENST00000533476 DNAJC2Q99543 621 aaKnown RBP23.07■■□□□ 1.28
UBXN1-215ENST00000533476 BTG4Q9NY30 223 aa23.07■■□□□ 1.28
UBXN1-215ENST00000533476 PALLDQ8WX93 1383 aa23.07■■□□□ 1.28
UBXN1-215ENST00000533476 EYA2O00167 538 aa23.06■■□□□ 1.28
UBXN1-215ENST00000533476 STX6O43752 255 aa23.06■■□□□ 1.28
UBXN1-215ENST00000533476 SYT1P21579 422 aa23.06■■□□□ 1.28
UBXN1-215ENST00000533476 CCDC83Q8IWF9 413 aa23.06■■□□□ 1.28
UBXN1-215ENST00000533476 RBM27Q9P2N5 1060 aaKnown RBP23.06■■□□□ 1.28
UBXN1-215ENST00000533476 TMEM87AQ8NBN3 555 aa23.06■■□□□ 1.28
UBXN1-215ENST00000533476 NASPP49321 788 aaPredicted RBP23.05■■□□□ 1.28
UBXN1-215ENST00000533476 ANKRD1Q15327 319 aa23.05■■□□□ 1.28
UBXN1-215ENST00000533476 BLOC1S2Q6QNY1 142 aa23.05■■□□□ 1.28
UBXN1-215ENST00000533476 KBTBD3Q8NAB2 608 aa23.05■■□□□ 1.28
UBXN1-215ENST00000533476 TMEM63CQ9P1W3 806 aa23.05■■□□□ 1.28
UBXN1-215ENST00000533476 ASAP1Q9ULH1 1129 aa23.05■■□□□ 1.28
UBXN1-215ENST00000533476 SPEF2Q9C093 1822 aa23.04■■□□□ 1.28
UBXN1-215ENST00000533476 RPS6KB1P23443 525 aa23.04■■□□□ 1.28
UBXN1-215ENST00000533476 ME3Q16798 604 aa23.04■■□□□ 1.28
UBXN1-215ENST00000533476 KIF6Q6ZMV9 814 aa23.04■■□□□ 1.28
UBXN1-215ENST00000533476 DNAJC10Q8IXB1 793 aa23.04■■□□□ 1.28
UBXN1-215ENST00000533476 NSFL1CQ9UNZ2 370 aaKnown RBP23.04■■□□□ 1.28
UBXN1-215ENST00000533476 NDUFB9Q9Y6M9 179 aa23.04■■□□□ 1.28
UBXN1-215ENST00000533476 SH3TC1Q8TE82 1336 aa23.04■■□□□ 1.28
UBXN1-215ENST00000533476 COL22A1Q8NFW1 1626 aaPredicted RBP23.04■■□□□ 1.28
UBXN1-215ENST00000533476 ST3GAL1Q11201 340 aa23.04■■□□□ 1.28
UBXN1-215ENST00000533476 KRT32Q14532 448 aa23.04■■□□□ 1.28
UBXN1-215ENST00000533476 GJB2P29033 226 aa23.03■■□□□ 1.28
UBXN1-215ENST00000533476 MCMDC2Q4G0Z9 681 aa23.03■■□□□ 1.28
UBXN1-215ENST00000533476 TPCN1Q9ULQ1 816 aa23.03■■□□□ 1.28
UBXN1-215ENST00000533476 U3KPZ7 1027 aaPredicted RBP23.03■■□□□ 1.28
UBXN1-215ENST00000533476 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.03■■□□□ 1.28
UBXN1-215ENST00000533476 STARD3NLO95772 234 aa23.02■■□□□ 1.28
UBXN1-215ENST00000533476 CCDC173Q0VFZ6 552 aa23.02■■□□□ 1.28
UBXN1-215ENST00000533476 LRRC24Q50LG9 513 aa23.02■■□□□ 1.28
UBXN1-215ENST00000533476 DDX46Q7L014 1031 aaKnown RBP23.02■■□□□ 1.28
UBXN1-215ENST00000533476 NEUROD6Q96NK8 337 aa23.02■■□□□ 1.28
UBXN1-215ENST00000533476 PPP1R9BQ96SB3 815 aa23.02■■□□□ 1.28
UBXN1-215ENST00000533476 FBXO3Q9UK99 471 aa23.02■■□□□ 1.28
UBXN1-215ENST00000533476 BCL9O00512 1426 aa23.02■■□□□ 1.28
UBXN1-215ENST00000533476 F13A1P00488 732 aa23.02■■□□□ 1.28
UBXN1-215ENST00000533476 PCCAP05165 728 aaPredicted RBP23.02■■□□□ 1.28
UBXN1-215ENST00000533476 ZNF594Q96JF6 807 aaPredicted RBP23.02■■□□□ 1.28
UBXN1-215ENST00000533476 PLA2G12BQ9BX93 195 aa23.02■■□□□ 1.28
UBXN1-215ENST00000533476 PAG1Q9NWQ8 432 aa23.02■■□□□ 1.28
UBXN1-215ENST00000533476 ATP6V1DQ9Y5K8 247 aa23.02■■□□□ 1.28
UBXN1-215ENST00000533476 TAF6LQ9Y6J9 622 aa23.02■■□□□ 1.28
UBXN1-215ENST00000533476 WNK3Q9BYP7 1800 aa23.02■■□□□ 1.28
UBXN1-215ENST00000533476 COL16A1Q07092 1604 aaPredicted RBP23.01■■□□□ 1.27
UBXN1-215ENST00000533476 AHDC1Q5TGY3 1603 aaPredicted RBP23.01■■□□□ 1.27
UBXN1-215ENST00000533476 LRSAM1Q6UWE0 723 aa23■■□□□ 1.27
UBXN1-215ENST00000533476 USP48Q86UV5 1035 aa23■■□□□ 1.27
UBXN1-215ENST00000533476 PDIA4P13667 645 aaKnown RBP23■■□□□ 1.27
UBXN1-215ENST00000533476 TIMM10P62072 90 aa23■■□□□ 1.27
UBXN1-215ENST00000533476 COL9A3Q14050 684 aaPredicted RBP23■■□□□ 1.27
UBXN1-215ENST00000533476 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23■■□□□ 1.27
UBXN1-215ENST00000533476 SYAP1Q96A49 352 aaPredicted RBP23■■□□□ 1.27
UBXN1-215ENST00000533476 MAP3K15Q6ZN16 1313 aa23■■□□□ 1.27
UBXN1-215ENST00000533476 HSPA1LP34931 641 aa22.99■■□□□ 1.27
UBXN1-215ENST00000533476 PRIM1P49642 420 aaKnown RBP22.99■■□□□ 1.27
UBXN1-215ENST00000533476 CCDC57Q2TAC2 916 aa22.99■■□□□ 1.27
UBXN1-215ENST00000533476 FOXD4L6Q3SYB3 417 aaPredicted RBP22.99■■□□□ 1.27
UBXN1-215ENST00000533476 FOXD4L3Q6VB84 417 aaPredicted RBP22.99■■□□□ 1.27
UBXN1-215ENST00000533476 CCDC129Q6ZRS4 1044 aa22.99■■□□□ 1.27
UBXN1-215ENST00000533476 TRIM44Q96DX7 344 aaPredicted RBP22.99■■□□□ 1.27
UBXN1-215ENST00000533476 HELLSQ9NRZ9 838 aa22.99■■□□□ 1.27
UBXN1-215ENST00000533476 MTMR6Q9Y217 621 aa22.99■■□□□ 1.27
UBXN1-215ENST00000533476 ZNF330Q9Y3S2 320 aaPredicted RBP22.99■■□□□ 1.27
UBXN1-215ENST00000533476 A0A1B0GUL7 405 aa22.98■■□□□ 1.27
UBXN1-215ENST00000533476 ESPNB1AK53 854 aa22.98■■□□□ 1.27
UBXN1-215ENST00000533476 GOLIM4O00461 696 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms