RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 CHAF1AQ13111 956 aaPredicted RBP19.69■□□□□ 0.74
CTSB-228ENST00000533455 KRT32Q14532 448 aa19.69■□□□□ 0.74
CTSB-228ENST00000533455 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.69■□□□□ 0.74
CTSB-228ENST00000533455 TDRD7Q8NHU6 1098 aaKnown RBP19.69■□□□□ 0.74
CTSB-228ENST00000533455 BOLA2Q9H3K6 86 aa19.69■□□□□ 0.74
CTSB-228ENST00000533455 BCL2L12Q9HB09 334 aa19.69■□□□□ 0.74
CTSB-228ENST00000533455 CBX8Q9HC52 389 aa19.69■□□□□ 0.74
CTSB-228ENST00000533455 TAF5LO75529 589 aa19.68■□□□□ 0.74
CTSB-228ENST00000533455 LUZP1Q86V48 1076 aa19.68■□□□□ 0.74
CTSB-228ENST00000533455 PRDM4Q9UKN5 801 aa19.68■□□□□ 0.74
CTSB-228ENST00000533455 TAF6LQ9Y6J9 622 aa19.68■□□□□ 0.74
CTSB-228ENST00000533455 PRAMEF22A3QJZ6 481 aa19.68■□□□□ 0.74
CTSB-228ENST00000533455 CAMK4Q16566 473 aa19.68■□□□□ 0.74
CTSB-228ENST00000533455 ANO6Q4KMQ2 910 aa19.68■□□□□ 0.74
CTSB-228ENST00000533455 ZNF589Q86UQ0 364 aaPredicted RBP19.68■□□□□ 0.74
CTSB-228ENST00000533455 GOLGA6L4A6NEF3 574 aa19.67■□□□□ 0.74
CTSB-228ENST00000533455 PTGS1P23219 599 aa19.67■□□□□ 0.74
CTSB-228ENST00000533455 PDIA6Q15084 440 aa19.67■□□□□ 0.74
CTSB-228ENST00000533455 PLA2G4DQ86XP0 818 aa19.67■□□□□ 0.74
CTSB-228ENST00000533455 GTF3C6Q969F1 213 aa19.67■□□□□ 0.74
CTSB-228ENST00000533455 TCEANC2Q96MN5 208 aa19.67■□□□□ 0.74
CTSB-228ENST00000533455 RIOK3O14730 519 aaKnown RBP19.66■□□□□ 0.74
CTSB-228ENST00000533455 IGKV5-2P06315 115 aa19.66■□□□□ 0.74
CTSB-228ENST00000533455 CTIFO43310 598 aaKnown RBP19.66■□□□□ 0.74
CTSB-228ENST00000533455 RESTQ13127 1097 aa19.66■□□□□ 0.74
CTSB-228ENST00000533455 CKAP2LQ8IYA6 745 aa19.66■□□□□ 0.74
CTSB-228ENST00000533455 CHMP3Q9Y3E7 222 aa19.66■□□□□ 0.74
CTSB-228ENST00000533455 SCN11AQ9UI33 1791 aa19.65■□□□□ 0.74
CTSB-228ENST00000533455 ZNF75DP51815 510 aa19.65■□□□□ 0.74
CTSB-228ENST00000533455 ARHGEF25Q86VW2 580 aa19.65■□□□□ 0.74
CTSB-228ENST00000533455 TFIP11Q9UBB9 837 aaKnown RBP19.65■□□□□ 0.74
CTSB-228ENST00000533455 LAMA4Q16363 1823 aa19.65■□□□□ 0.74
CTSB-228ENST00000533455 CAVIN2O95810 425 aa19.64■□□□□ 0.74
CTSB-228ENST00000533455 ATP5JP18859 108 aa19.64■□□□□ 0.74
CTSB-228ENST00000533455 ANKRD7Q92527 254 aa19.64■□□□□ 0.74
CTSB-228ENST00000533455 PGBD1Q96JS3 809 aa19.64■□□□□ 0.74
CTSB-228ENST00000533455 ARID3AQ99856 593 aa19.64■□□□□ 0.74
CTSB-228ENST00000533455 COL15A1P39059 1388 aa19.64■□□□□ 0.73
CTSB-228ENST00000533455 SIL1Q9H173 461 aa19.64■□□□□ 0.73
CTSB-228ENST00000533455 NEURL1BA8MQ27 555 aa19.63■□□□□ 0.73
CTSB-228ENST00000533455 CCDC186Q7Z3E2 898 aa19.63■□□□□ 0.73
CTSB-228ENST00000533455 COPRSQ9NQ92 184 aa19.63■□□□□ 0.73
CTSB-228ENST00000533455 AFDNP55196 1824 aaKnown RBP19.63■□□□□ 0.73
CTSB-228ENST00000533455 CDC25BP30305 580 aa19.63■□□□□ 0.73
CTSB-228ENST00000533455 PSME1Q06323 249 aa19.63■□□□□ 0.73
CTSB-228ENST00000533455 STK3Q13188 491 aa19.63■□□□□ 0.73
CTSB-228ENST00000533455 NEK1Q96PY6 1258 aa19.63■□□□□ 0.73
CTSB-228ENST00000533455 ZSCAN16Q9H4T2 348 aaPredicted RBP19.63■□□□□ 0.73
CTSB-228ENST00000533455 U3KPZ7 1027 aaPredicted RBP19.63■□□□□ 0.73
CTSB-228ENST00000533455 NR1I2O75469 434 aa19.62■□□□□ 0.73
CTSB-228ENST00000533455 GCKRQ14397 625 aa19.62■□□□□ 0.73
CTSB-228ENST00000533455 RIC3Q7Z5B4 369 aa19.62■□□□□ 0.73
CTSB-228ENST00000533455 ANKRD24Q8TF21 1146 aa19.62■□□□□ 0.73
CTSB-228ENST00000533455 BRF1Q92994 677 aa19.62■□□□□ 0.73
CTSB-228ENST00000533455 JAK2O60674 1132 aa19.61■□□□□ 0.73
CTSB-228ENST00000533455 NEXNQ0ZGT2 675 aa19.61■□□□□ 0.73
CTSB-228ENST00000533455 AIMP1Q12904 312 aaKnown RBP19.61■□□□□ 0.73
CTSB-228ENST00000533455 BICD2Q8TD16 824 aa19.61■□□□□ 0.73
CTSB-228ENST00000533455 ZNF609O15014 1411 aa19.61■□□□□ 0.73
CTSB-228ENST00000533455 ZNF165P49910 485 aa19.61■□□□□ 0.73
CTSB-228ENST00000533455 SYCP1Q15431 976 aa19.61■□□□□ 0.73
CTSB-228ENST00000533455 EPHA10Q5JZY3 1008 aa19.61■□□□□ 0.73
CTSB-228ENST00000533455 UTP14CQ5TAP6 766 aaKnown RBP19.61■□□□□ 0.73
CTSB-228ENST00000533455 ZSCAN25Q6NSZ9 544 aa19.61■□□□□ 0.73
CTSB-228ENST00000533455 SMARCC2Q8TAQ2 1214 aa19.61■□□□□ 0.73
CTSB-228ENST00000533455 KLHDC4Q8TBB5 520 aa19.61■□□□□ 0.73
CTSB-228ENST00000533455 TRIM5Q9C035 493 aa19.61■□□□□ 0.73
CTSB-228ENST00000533455 FAM177BA6PVY3 158 aa19.6■□□□□ 0.73
CTSB-228ENST00000533455 GCP02774 474 aa19.6■□□□□ 0.73
CTSB-228ENST00000533455 RFX5P48382 616 aaPredicted RBP19.6■□□□□ 0.73
CTSB-228ENST00000533455 TNNI3KQ59H18 835 aa19.6■□□□□ 0.73
CTSB-228ENST00000533455 LLPHQ9BRT6 129 aaKnown RBP19.6■□□□□ 0.73
CTSB-228ENST00000533455 METTL22Q9BUU2 404 aaPredicted RBP19.6■□□□□ 0.73
CTSB-228ENST00000533455 DBNLQ9UJU6 430 aaKnown RBP19.6■□□□□ 0.73
CTSB-228ENST00000533455 CFAP45Q9UL16 551 aa19.6■□□□□ 0.73
CTSB-228ENST00000533455 FPGT-TNNI3KV9GXZ4 949 aa19.6■□□□□ 0.73
CTSB-228ENST00000533455 TRPM3Q9HCF6 1732 aaPredicted RBP19.6■□□□□ 0.73
CTSB-228ENST00000533455 RGPD5Q99666 1765 aa19.6■□□□□ 0.73
CTSB-228ENST00000533455 PPP4R3BQ5MIZ7 849 aa19.59■□□□□ 0.73
CTSB-228ENST00000533455 SARM1Q6SZW1 724 aa19.59■□□□□ 0.73
CTSB-228ENST00000533455 Q6ZUG5 572 aa19.59■□□□□ 0.73
CTSB-228ENST00000533455 PDCL2Q8N4E4 241 aa19.59■□□□□ 0.73
CTSB-228ENST00000533455 EDC3Q96F86 508 aaKnown RBP19.59■□□□□ 0.73
CTSB-228ENST00000533455 DNAJC25Q9H1X3 360 aa19.59■□□□□ 0.73
CTSB-228ENST00000533455 LRMPQ12912 555 aa19.59■□□□□ 0.73
CTSB-228ENST00000533455 DRC7Q8IY82 874 aa19.59■□□□□ 0.73
CTSB-228ENST00000533455 ARFGEF2Q9Y6D5 1785 aa19.58■□□□□ 0.73
CTSB-228ENST00000533455 SMTNL1A8MU46 457 aa19.58■□□□□ 0.73
CTSB-228ENST00000533455 ESCO1Q5FWF5 840 aa19.58■□□□□ 0.73
CTSB-228ENST00000533455 NRBP1Q9UHY1 535 aa19.58■□□□□ 0.73
CTSB-228ENST00000533455 H3BQV1 296 aa19.58■□□□□ 0.72
CTSB-228ENST00000533455 DMTNQ08495 405 aa19.58■□□□□ 0.72
CTSB-228ENST00000533455 IFFO2Q5TF58 517 aa19.58■□□□□ 0.72
CTSB-228ENST00000533455 NAA16Q6N069 864 aaPredicted RBP19.58■□□□□ 0.72
CTSB-228ENST00000533455 CTAGE5O15320 804 aa19.57■□□□□ 0.72
CTSB-228ENST00000533455 PFKFB2O60825 505 aa19.57■□□□□ 0.72
CTSB-228ENST00000533455 CYP21A2P08686 494 aa19.57■□□□□ 0.72
CTSB-228ENST00000533455 PTPN12Q05209 780 aaKnown RBP19.57■□□□□ 0.72
CTSB-228ENST00000533455 IQCB1Q15051 598 aa19.57■□□□□ 0.72
CTSB-228ENST00000533455 ATP2B3Q16720 1220 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms